; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0030840 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0030840
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr11:1933645..1934328
RNA-Seq ExpressionLag0030840
SyntenyLag0030840
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON90093.1 Ribonuclease H-like domain containing protein [Trema orientale]6.4e-2131.6Show/hide
Query:  FELFVVVLWVVWNCRNQRKFKGVGSV-EGLVEWTGSYISSFQQAALSSGLCGHKGIIGEEVRWSPPEFGWYKVNVDASFKREGWQTGLGVVVWDFAGRVM
        FEL+ V+ W++W  RN     GV  + E L+E  G ++  FQ+   S  +   + +I  + +W  P  G  K+NVDA+ K      G+GV+V D  G V+
Subjt:  FELFVVVLWVVWNCRNQRKFKGVGSV-EGLVEWTGSYISSFQQAALSSGLCGHKGIIGEEVRWSPPEFGWYKVNVDASFKREGWQTGLGVVVWDFAGRVM

Query:  LSTSLVQRHVRSPKMAEGWATVKGMRLALEMGLFPLVLETNSSRVADVFQDEAVDDYSGLGVLVVDLRKDLSGSSFVGCMFTRREGNGVAHQLARWALRE
         ++SL      SP +AE  A  +G++  +  G+FP V+E ++  +    Q++  +     G +V D+ + L       C FT R  N  AH LA++A R 
Subjt:  LSTSLVQRHVRSPKMAEGWATVKGMRLALEMGLFPLVLETNSSRVADVFQDEAVDDYSGLGVLVVDLRKDLSGSSFVGCMFTRREGNGVAHQLARWALRE

Query:  EESMVWVESAPE
          S  W +S P+
Subjt:  EESMVWVESAPE

XP_022135942.1 uncharacterized protein LOC111007775 [Momordica charantia]1.4e-2335.14Show/hide
Query:  VVLWVVWNCRNQRKF-KGVG-SVEGLVEWTGSYISSFQQA----ALSSGLCGHKGIIGEEVRWSPPEFGWYKVNVDASFKREGWQTGLGVVVWDFAGRVM
        V LW +WN RNQ  F  G G  +  +V+W   Y+  +Q A    +L   L G  G +     W PP   ++KVNVDA+FK+  +  GL +++ D    V+
Subjt:  VVLWVVWNCRNQRKF-KGVG-SVEGLVEWTGSYISSFQQA----ALSSGLCGHKGIIGEEVRWSPPEFGWYKVNVDASFKREGWQTGLGVVVWDFAGRVM

Query:  LSTSLVQRHVRSPKMAEGWATVKGMRLALEMGLFPLVLETNSSRVADVFQDEAVDDYSGLGVLVVDLRKDLSGSSF-VGCMFTRREGNGVAHQLARWALR
        LS      HV    +AE  A  +G+ LA+E GL P  +ET+SS+V ++ + +  +D S +GVL   +R  +S      G  F  REGN  AH LAR  + 
Subjt:  LSTSLVQRHVRSPKMAEGWATVKGMRLALEMGLFPLVLETNSSRVADVFQDEAVDDYSGLGVLVVDLRKDLSGSSF-VGCMFTRREGNGVAHQLARWALR

Query:  EEESMVWVESAPECVEALVVSD
         E   VWVE     +  ++ +D
Subjt:  EEESMVWVESAPECVEALVVSD

XP_022140628.1 uncharacterized protein LOC111011237 [Momordica charantia]1.2e-2235.35Show/hide
Query:  LVEWTGSYISSFQQAALSSGLCGHKGIIGEEVRWSPPEFGWYKVNVDASFKREGWQTGLGVVVWDFAGRVMLSTSLVQRHVRSPKMAEGWATVKGMRLAL
        LVEW   Y+  F++A  +S     +     EV W PP+   YK+N DASF       GLG+++ +  G+VM S +    +++S  MAE    V+G++LA 
Subjt:  LVEWTGSYISSFQQAALSSGLCGHKGIIGEEVRWSPPEFGWYKVNVDASFKREGWQTGLGVVVWDFAGRVMLSTSLVQRHVRSPKMAEGWATVKGMRLAL

Query:  EMGLFPLVLETNSSRVADVFQDEAVDDYSGLGVLVVDLRKDLSGSSFVGCMFTRREGNGVAHQLARWALREEESMVWVESAP---------ECVEALV
        ++G+ P++LET+SSR+ ++F   + +D S  G +V+  +   + S      F +REGN  AH LAR AL   E  +W+E  P         EC+E LV
Subjt:  EMGLFPLVLETNSSRVADVFQDEAVDDYSGLGVLVVDLRKDLSGSSFVGCMFTRREGNGVAHQLARWALREEESMVWVESAP---------ECVEALV

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]2.6e-2233.77Show/hide
Query:  FELFVVVLWVVWNCRNQRKF----KGVGSV-EGLVEWTGSYISSFQQAALSSGLCGHKGIIGEEVRWSPPEFGWYKVNVDASFKREGWQTGLGVVVWDFA
        FE   VV+W +WN RN R F    K V  +   LVEW   Y   F++A  S+ + G +     E+ W PP+ G YK+N DASF       GLG+++ +  
Subjt:  FELFVVVLWVVWNCRNQRKF----KGVGSV-EGLVEWTGSYISSFQQAALSSGLCGHKGIIGEEVRWSPPEFGWYKVNVDASFKREGWQTGLGVVVWDFA

Query:  GRVMLSTSLVQRHVRSPKMAEGWATVKGMRLALEMGLFPLVLETNSSRVADVFQDEAVDDYSGLGVLVVDLRKDLSGSSFVGCMFTRREGNGVAHQLARW
        G+VM + +    +++S  MAE  A V+G++LA E+G+ P                 A++D S  G +V+  +   + S      F +REGN  AH LAR 
Subjt:  GRVMLSTSLVQRHVRSPKMAEGWATVKGMRLALEMGLFPLVLETNSSRVADVFQDEAVDDYSGLGVLVVDLRKDLSGSSFVGCMFTRREGNGVAHQLARW

Query:  ALREEESMVWVESAP---------ECVEALV
        AL   E  +W+E  P         EC+E L+
Subjt:  ALREEESMVWVESAP---------ECVEALV

XP_022150944.1 uncharacterized protein LOC111018973 [Momordica charantia]9.6e-2534.7Show/hide
Query:  VVVLWVVWNCRNQ--RKFKGVGSVEGLVEWTGSYISSFQQAALSSGLCGHKGIIGEEVRWSPPEFGWYKVNVDASFKREGWQTGLGVVVWDFAGRVMLST
        VV+LW +WN RNQ  + F   GS+  LV W+ +Y+  +Q A  SS              W PP     KVNVDA+F++E +  G+GV++ D  G V L+ 
Subjt:  VVVLWVVWNCRNQ--RKFKGVGSVEGLVEWTGSYISSFQQAALSSGLCGHKGIIGEEVRWSPPEFGWYKVNVDASFKREGWQTGLGVVVWDFAGRVMLST

Query:  SLVQRHVRSPKMAEGWATVKGMRLALEMGLFPLVLETNSSRVADVFQDEAVDDYSGLGVLVVDLRKDLSG-SSFVGCMFTRREGNGVAHQLARWALREEE
          +          EG+A  +G+ LA+E G     +ET+S R+ ++   + VDD S +GVL   ++  LS  +  V   FT R GN  AH LA+ AL    
Subjt:  SLVQRHVRSPKMAEGWATVKGMRLALEMGLFPLVLETNSSRVADVFQDEAVDDYSGLGVLVVDLRKDLSG-SSFVGCMFTRREGNGVAHQLARWALREEE

Query:  SMVWVESAPECVEALVVSD
          +WVE  P+ + +++  D
Subjt:  SMVWVESAPECVEALVVSD

TrEMBL top hitse value%identityAlignment
A0A5C7IIT4 Uncharacterized protein1.2e-2034.07Show/hide
Query:  FELFVVVLWVVWNCRNQRKF-KGVGSVE--GLVEWTGSYISSFQQA-ALSSGLCGHKGIIGEEV--RWSPPEFGWYKVNVDASFKREGWQTGLGVVVWDF
        FE   VV W VW  RNQ  + K   +V    +++W  S+I  F+ A  + +G      ++ + V  +W P   G YK+N DA+       TG+GVV+ D 
Subjt:  FELFVVVLWVVWNCRNQRKF-KGVGSVE--GLVEWTGSYISSFQQA-ALSSGLCGHKGIIGEEV--RWSPPEFGWYKVNVDASFKREGWQTGLGVVVWDF

Query:  AGRVMLSTSLVQRHVRSPKMAEGWATVKGMRLALEMGLFPLVLETNSSRVADVFQDEAVDDYSGLGVLVVDLRKDLSGSSFVGCMFTRREGNGVAHQLAR
         G VM S       +  P+  E  A ++G RLALE GL P  +E++S  V ++     +   + +GV++ D+    S S F    F  R  N VAH LA+
Subjt:  AGRVMLSTSLVQRHVRSPKMAEGWATVKGMRLALEMGLFPLVLETNSSRVADVFQDEAVDDYSGLGVLVVDLRKDLSGSSFVGCMFTRREGNGVAHQLAR

Query:  WALREEESMVWVESAPECVEALVVSD
         +L  E   VW+E  P  VE+LV+ D
Subjt:  WALREEESMVWVESAPECVEALVVSD

A0A6J1C467 uncharacterized protein LOC1110077756.7e-2435.14Show/hide
Query:  VVLWVVWNCRNQRKF-KGVG-SVEGLVEWTGSYISSFQQA----ALSSGLCGHKGIIGEEVRWSPPEFGWYKVNVDASFKREGWQTGLGVVVWDFAGRVM
        V LW +WN RNQ  F  G G  +  +V+W   Y+  +Q A    +L   L G  G +     W PP   ++KVNVDA+FK+  +  GL +++ D    V+
Subjt:  VVLWVVWNCRNQRKF-KGVG-SVEGLVEWTGSYISSFQQA----ALSSGLCGHKGIIGEEVRWSPPEFGWYKVNVDASFKREGWQTGLGVVVWDFAGRVM

Query:  LSTSLVQRHVRSPKMAEGWATVKGMRLALEMGLFPLVLETNSSRVADVFQDEAVDDYSGLGVLVVDLRKDLSGSSF-VGCMFTRREGNGVAHQLARWALR
        LS      HV    +AE  A  +G+ LA+E GL P  +ET+SS+V ++ + +  +D S +GVL   +R  +S      G  F  REGN  AH LAR  + 
Subjt:  LSTSLVQRHVRSPKMAEGWATVKGMRLALEMGLFPLVLETNSSRVADVFQDEAVDDYSGLGVLVVDLRKDLSGSSF-VGCMFTRREGNGVAHQLARWALR

Query:  EEESMVWVESAPECVEALVVSD
         E   VWVE     +  ++ +D
Subjt:  EEESMVWVESAPECVEALVVSD

A0A6J1CIF1 uncharacterized protein LOC1110112375.7e-2335.35Show/hide
Query:  LVEWTGSYISSFQQAALSSGLCGHKGIIGEEVRWSPPEFGWYKVNVDASFKREGWQTGLGVVVWDFAGRVMLSTSLVQRHVRSPKMAEGWATVKGMRLAL
        LVEW   Y+  F++A  +S     +     EV W PP+   YK+N DASF       GLG+++ +  G+VM S +    +++S  MAE    V+G++LA 
Subjt:  LVEWTGSYISSFQQAALSSGLCGHKGIIGEEVRWSPPEFGWYKVNVDASFKREGWQTGLGVVVWDFAGRVMLSTSLVQRHVRSPKMAEGWATVKGMRLAL

Query:  EMGLFPLVLETNSSRVADVFQDEAVDDYSGLGVLVVDLRKDLSGSSFVGCMFTRREGNGVAHQLARWALREEESMVWVESAP---------ECVEALV
        ++G+ P++LET+SSR+ ++F   + +D S  G +V+  +   + S      F +REGN  AH LAR AL   E  +W+E  P         EC+E LV
Subjt:  EMGLFPLVLETNSSRVADVFQDEAVDDYSGLGVLVVDLRKDLSGSSFVGCMFTRREGNGVAHQLARWALREEESMVWVESAP---------ECVEALV

A0A6J1DAR4 uncharacterized protein LOC1110189541.3e-2233.77Show/hide
Query:  FELFVVVLWVVWNCRNQRKF----KGVGSV-EGLVEWTGSYISSFQQAALSSGLCGHKGIIGEEVRWSPPEFGWYKVNVDASFKREGWQTGLGVVVWDFA
        FE   VV+W +WN RN R F    K V  +   LVEW   Y   F++A  S+ + G +     E+ W PP+ G YK+N DASF       GLG+++ +  
Subjt:  FELFVVVLWVVWNCRNQRKF----KGVGSV-EGLVEWTGSYISSFQQAALSSGLCGHKGIIGEEVRWSPPEFGWYKVNVDASFKREGWQTGLGVVVWDFA

Query:  GRVMLSTSLVQRHVRSPKMAEGWATVKGMRLALEMGLFPLVLETNSSRVADVFQDEAVDDYSGLGVLVVDLRKDLSGSSFVGCMFTRREGNGVAHQLARW
        G+VM + +    +++S  MAE  A V+G++LA E+G+ P                 A++D S  G +V+  +   + S      F +REGN  AH LAR 
Subjt:  GRVMLSTSLVQRHVRSPKMAEGWATVKGMRLALEMGLFPLVLETNSSRVADVFQDEAVDDYSGLGVLVVDLRKDLSGSSFVGCMFTRREGNGVAHQLARW

Query:  ALREEESMVWVESAP---------ECVEALV
        AL   E  +W+E  P         EC+E L+
Subjt:  ALREEESMVWVESAP---------ECVEALV

A0A6J1DBJ7 uncharacterized protein LOC1110189734.6e-2534.7Show/hide
Query:  VVVLWVVWNCRNQ--RKFKGVGSVEGLVEWTGSYISSFQQAALSSGLCGHKGIIGEEVRWSPPEFGWYKVNVDASFKREGWQTGLGVVVWDFAGRVMLST
        VV+LW +WN RNQ  + F   GS+  LV W+ +Y+  +Q A  SS              W PP     KVNVDA+F++E +  G+GV++ D  G V L+ 
Subjt:  VVVLWVVWNCRNQ--RKFKGVGSVEGLVEWTGSYISSFQQAALSSGLCGHKGIIGEEVRWSPPEFGWYKVNVDASFKREGWQTGLGVVVWDFAGRVMLST

Query:  SLVQRHVRSPKMAEGWATVKGMRLALEMGLFPLVLETNSSRVADVFQDEAVDDYSGLGVLVVDLRKDLSG-SSFVGCMFTRREGNGVAHQLARWALREEE
          +          EG+A  +G+ LA+E G     +ET+S R+ ++   + VDD S +GVL   ++  LS  +  V   FT R GN  AH LA+ AL    
Subjt:  SLVQRHVRSPKMAEGWATVKGMRLALEMGLFPLVLETNSSRVADVFQDEAVDDYSGLGVLVVDLRKDLSG-SSFVGCMFTRREGNGVAHQLARWALREEE

Query:  SMVWVESAPECVEALVVSD
          +WVE  P+ + +++  D
Subjt:  SMVWVESAPECVEALVVSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAATTTGAGTTGTTTGTGGTGGTGTTGTGGGTCGTGTGGAATTGTCGCAACCAACGAAAATTCAAGGGGGTTGGGTCTGTGGAGGGACTAGTGGAGTGGACGGG
GAGTTACATCTCTTCGTTCCAGCAGGCTGCCTTGTCTAGTGGGTTGTGTGGGCATAAGGGGATTATAGGGGAAGAGGTAAGATGGAGTCCCCCGGAGTTTGGTTGGTATA
AGGTGAACGTTGATGCATCTTTTAAAAGAGAGGGATGGCAGACGGGTTTGGGGGTGGTTGTCTGGGATTTTGCCGGACGGGTTATGCTGTCGACGTCGTTGGTGCAACGA
CATGTACGGAGCCCGAAGATGGCCGAAGGTTGGGCTACGGTGAAGGGCATGAGATTGGCGTTGGAGATGGGTCTGTTCCCACTGGTGTTGGAGACCAATTCCAGTCGAGT
GGCTGATGTTTTTCAGGATGAGGCAGTGGATGACTATTCTGGTTTGGGTGTGCTAGTGGTTGATCTGCGTAAGGATTTATCGGGGTCTTCTTTTGTCGGCTGTATGTTTA
CCCGAAGAGAGGGGAACGGAGTGGCTCATCAATTGGCTCGTTGGGCGCTGAGAGAGGAAGAATCTATGGTGTGGGTGGAATCTGCACCTGAGTGTGTTGAGGCGTTGGTT
GTTTCTGATATGGTTTTGGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAATTTGAGTTGTTTGTGGTGGTGTTGTGGGTCGTGTGGAATTGTCGCAACCAACGAAAATTCAAGGGGGTTGGGTCTGTGGAGGGACTAGTGGAGTGGACGGG
GAGTTACATCTCTTCGTTCCAGCAGGCTGCCTTGTCTAGTGGGTTGTGTGGGCATAAGGGGATTATAGGGGAAGAGGTAAGATGGAGTCCCCCGGAGTTTGGTTGGTATA
AGGTGAACGTTGATGCATCTTTTAAAAGAGAGGGATGGCAGACGGGTTTGGGGGTGGTTGTCTGGGATTTTGCCGGACGGGTTATGCTGTCGACGTCGTTGGTGCAACGA
CATGTACGGAGCCCGAAGATGGCCGAAGGTTGGGCTACGGTGAAGGGCATGAGATTGGCGTTGGAGATGGGTCTGTTCCCACTGGTGTTGGAGACCAATTCCAGTCGAGT
GGCTGATGTTTTTCAGGATGAGGCAGTGGATGACTATTCTGGTTTGGGTGTGCTAGTGGTTGATCTGCGTAAGGATTTATCGGGGTCTTCTTTTGTCGGCTGTATGTTTA
CCCGAAGAGAGGGGAACGGAGTGGCTCATCAATTGGCTCGTTGGGCGCTGAGAGAGGAAGAATCTATGGTGTGGGTGGAATCTGCACCTGAGTGTGTTGAGGCGTTGGTT
GTTTCTGATATGGTTTTGGTGTAA
Protein sequenceShow/hide protein sequence
MGKFELFVVVLWVVWNCRNQRKFKGVGSVEGLVEWTGSYISSFQQAALSSGLCGHKGIIGEEVRWSPPEFGWYKVNVDASFKREGWQTGLGVVVWDFAGRVMLSTSLVQR
HVRSPKMAEGWATVKGMRLALEMGLFPLVLETNSSRVADVFQDEAVDDYSGLGVLVVDLRKDLSGSSFVGCMFTRREGNGVAHQLARWALREEESMVWVESAPECVEALV
VSDMVLV