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Lag0030847 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0030847
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposon Tf2-1 polyprotein isoform X1
Genome locationchr11:2047355..2049734
RNA-Seq ExpressionLag0030847
SyntenyLag0030847
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036018.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]3.4e-2461.36Show/hide
Query:  EEISGDQSKFKKVEMPVIGGDEPDSWLFRADKYFQIHKLSDAKKPIVAVVSFEGVALNWYRAKEEREPFKDWRGLKASSLIEKISKEE
        EE + D+SKFKKVEMPV  G++PD+WLFRAD+YFQIH+L+D++K  +A +SFEG ALNWYRA+EER+ FKDW  LK   L+   S  E
Subjt:  EEISGDQSKFKKVEMPVIGGDEPDSWLFRADKYFQIHKLSDAKKPIVAVVSFEGVALNWYRAKEEREPFKDWRGLKASSLIEKISKEE

KAA0037097.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]1.7e-2357.78Show/hide
Query:  EEISGDQSKFKKVEMPVIGGDEPDSWLFRADKYFQIHKLSDAKKPIVAVVSFEGVALNWYRAKEEREPFKDWRGLKASSLIEKISKEEER
        EE + D++KFKKVEMPV  G++PDSWLFRA++YFQIHKLSD++K +V+ +SF+G ALNWYR++EERE F  W  LK   L+   S  +E+
Subjt:  EEISGDQSKFKKVEMPVIGGDEPDSWLFRADKYFQIHKLSDAKKPIVAVVSFEGVALNWYRAKEEREPFKDWRGLKASSLIEKISKEEER

KAA0052895.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]1.3e-2361.36Show/hide
Query:  EEISGDQSKFKKVEMPVIGGDEPDSWLFRADKYFQIHKLSDAKKPIVAVVSFEGVALNWYRAKEEREPFKDWRGLKASSLIEKISKEE
        EE + D+SKFKKVEMPV  G++P++WLFRAD+YFQIH+L+D++K  VA +SFEG ALNWYRA+EER+ FKDW  LK   L+   S  E
Subjt:  EEISGDQSKFKKVEMPVIGGDEPDSWLFRADKYFQIHKLSDAKKPIVAVVSFEGVALNWYRAKEEREPFKDWRGLKASSLIEKISKEE

TYJ98817.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]2.6e-2462.5Show/hide
Query:  EEISGDQSKFKKVEMPVIGGDEPDSWLFRADKYFQIHKLSDAKKPIVAVVSFEGVALNWYRAKEEREPFKDWRGLKASSLIEKISKEE
        EE + D+SKFKKVEMPV  G++PD+WLFRAD+YFQIH+L+D++K  VA +SFEG ALNWYRA+EER+ FKDW  LK   L+   S  E
Subjt:  EEISGDQSKFKKVEMPVIGGDEPDSWLFRADKYFQIHKLSDAKKPIVAVVSFEGVALNWYRAKEEREPFKDWRGLKASSLIEKISKEE

XP_031745972.1 uncharacterized protein LOC116406393 [Cucumis sativus]5.7e-2457.58Show/hide
Query:  EGSCKVEAERVEEISGDQSKFKKVEMPVIGGDEPDSWLFRADKYFQIHKLSDAKKPIVAVVSFEGVALNWYRAKEEREPFKDWRGLKASSLIEKISKEE
        E   K      EE + ++ KFKKVEMPV  G++PDSWLFRAD+YFQIHKLSDA+K +VA +SFEG ALNWYRA+EER+ F  W  LK   L+   S  E
Subjt:  EGSCKVEAERVEEISGDQSKFKKVEMPVIGGDEPDSWLFRADKYFQIHKLSDAKKPIVAVVSFEGVALNWYRAKEEREPFKDWRGLKASSLIEKISKEE

TrEMBL top hitse value%identityAlignment
A0A5A7SZK8 Transposon Tf2-1 polyprotein isoform X11.6e-2461.36Show/hide
Query:  EEISGDQSKFKKVEMPVIGGDEPDSWLFRADKYFQIHKLSDAKKPIVAVVSFEGVALNWYRAKEEREPFKDWRGLKASSLIEKISKEE
        EE + D+SKFKKVEMPV  G++PD+WLFRAD+YFQIH+L+D++K  +A +SFEG ALNWYRA+EER+ FKDW  LK   L+   S  E
Subjt:  EEISGDQSKFKKVEMPVIGGDEPDSWLFRADKYFQIHKLSDAKKPIVAVVSFEGVALNWYRAKEEREPFKDWRGLKASSLIEKISKEE

A0A5A7T6B1 Transposon Ty3-G Gag-Pol polyprotein8.1e-2457.78Show/hide
Query:  EEISGDQSKFKKVEMPVIGGDEPDSWLFRADKYFQIHKLSDAKKPIVAVVSFEGVALNWYRAKEEREPFKDWRGLKASSLIEKISKEEER
        EE + D++KFKKVEMPV  G++PDSWLFRA++YFQIHKLSD++K +V+ +SF+G ALNWYR++EERE F  W  LK   L+   S  +E+
Subjt:  EEISGDQSKFKKVEMPVIGGDEPDSWLFRADKYFQIHKLSDAKKPIVAVVSFEGVALNWYRAKEEREPFKDWRGLKASSLIEKISKEEER

A0A5A7UGM8 Transposon Tf2-1 polyprotein isoform X16.2e-2461.36Show/hide
Query:  EEISGDQSKFKKVEMPVIGGDEPDSWLFRADKYFQIHKLSDAKKPIVAVVSFEGVALNWYRAKEEREPFKDWRGLKASSLIEKISKEE
        EE + D+SKFKKVEMPV  G++P++WLFRAD+YFQIH+L+D++K  VA +SFEG ALNWYRA+EER+ FKDW  LK   L+   S  E
Subjt:  EEISGDQSKFKKVEMPVIGGDEPDSWLFRADKYFQIHKLSDAKKPIVAVVSFEGVALNWYRAKEEREPFKDWRGLKASSLIEKISKEE

A0A5D3BI70 Transposon Tf2-1 polyprotein isoform X11.2e-2462.5Show/hide
Query:  EEISGDQSKFKKVEMPVIGGDEPDSWLFRADKYFQIHKLSDAKKPIVAVVSFEGVALNWYRAKEEREPFKDWRGLKASSLIEKISKEE
        EE + D+SKFKKVEMPV  G++PD+WLFRAD+YFQIH+L+D++K  VA +SFEG ALNWYRA+EER+ FKDW  LK   L+   S  E
Subjt:  EEISGDQSKFKKVEMPVIGGDEPDSWLFRADKYFQIHKLSDAKKPIVAVVSFEGVALNWYRAKEEREPFKDWRGLKASSLIEKISKEE

A0A5D3C860 Transposon Tf2-1 polyprotein isoform X18.1e-2457.78Show/hide
Query:  EEISGDQSKFKKVEMPVIGGDEPDSWLFRADKYFQIHKLSDAKKPIVAVVSFEGVALNWYRAKEEREPFKDWRGLKASSLIEKISKEEER
        EE + D++KFKKVEMPV  G++PDSWLFRA++YFQIHKLSD++K +V+ +SF+G ALNWYR++EERE F  W  LK   L+   S  +E+
Subjt:  EEISGDQSKFKKVEMPVIGGDEPDSWLFRADKYFQIHKLSDAKKPIVAVVSFEGVALNWYRAKEEREPFKDWRGLKASSLIEKISKEEER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGAATGGGAGCTCGATTGGAGTGTTAGGACTCTTGCTAAGGTTGACTTGTTTAGTTGGAATAGTCCCATGGGGGGGGGGTCTTCACGAATGGCCATCACAATTTT
GATCAATCTGGATCCTTTGCCATTTCCTTTTGAACTATGTGAGGGATCGTGCAAAGTTGAAGCTGAGCGGGTGGAAGAGATTAGCGGGGATCAAAGTAAATTCAAGAAGG
TGGAGATGCCTGTGATTGGGGGTGATGAACCTGATTCGTGGCTATTTCGAGCGGATAAGTATTTTCAAATTCATAAACTATCGGATGCAAAGAAACCAATCGTGGCTGTG
GTGAGTTTTGAAGGAGTAGCATTAAACTGGTATCGAGCGAAGGAAGAACGTGAACCATTCAAGGATTGGAGGGGACTTAAAGCTTCGTCGCTTATTGAAAAGATCTCGAA
GGAAGAAGAAAGGCACCGTGTCTACTTACCACTTCCGTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGAATGGGAGCTCGATTGGAGTGTTAGGACTCTTGCTAAGGTTGACTTGTTTAGTTGGAATAGTCCCATGGGGGGGGGGTCTTCACGAATGGCCATCACAATTTT
GATCAATCTGGATCCTTTGCCATTTCCTTTTGAACTATGTGAGGGATCGTGCAAAGTTGAAGCTGAGCGGGTGGAAGAGATTAGCGGGGATCAAAGTAAATTCAAGAAGG
TGGAGATGCCTGTGATTGGGGGTGATGAACCTGATTCGTGGCTATTTCGAGCGGATAAGTATTTTCAAATTCATAAACTATCGGATGCAAAGAAACCAATCGTGGCTGTG
GTGAGTTTTGAAGGAGTAGCATTAAACTGGTATCGAGCGAAGGAAGAACGTGAACCATTCAAGGATTGGAGGGGACTTAAAGCTTCGTCGCTTATTGAAAAGATCTCGAA
GGAAGAAGAAAGGCACCGTGTCTACTTACCACTTCCGTCCTAA
Protein sequenceShow/hide protein sequence
MQEWELDWSVRTLAKVDLFSWNSPMGGGSSRMAITILINLDPLPFPFELCEGSCKVEAERVEEISGDQSKFKKVEMPVIGGDEPDSWLFRADKYFQIHKLSDAKKPIVAV
VSFEGVALNWYRAKEEREPFKDWRGLKASSLIEKISKEEERHRVYLPLPS