; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0030848 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0030848
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionmethyl-CpG-binding domain-containing protein 13 isoform X1
Genome locationchr11:2050796..2060976
RNA-Seq ExpressionLag0030848
SyntenyLag0030848
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013226.1 Methyl-CpG-binding domain-containing protein 13, partial [Cucurbita argyrosperma subsp. argyrosperma]6.9e-2353.68Show/hide
Query:  FYIDPVNRKKCTSL-DKGCTPSTGKVSRLAYKLRNQRNNYIEFQHDDISSLAAPKKEMQAIGKARRQIIWSESSSEPSEITNDEAIFPKC----------
        FYIDPVN     S+ +     ++G VSRLAYK R+QR   +EFQHDDISS A PKKEMQAIGKARRQIIW+E+  EP +ITN+EAIFP            
Subjt:  FYIDPVNRKKCTSL-DKGCTPSTGKVSRLAYKLRNQRNNYIEFQHDDISSLAAPKKEMQAIGKARRQIIWSESSSEPSEITNDEAIFPKC----------

Query:  -----YKGIGTKVALI----DSTGKNDFSEFVATPS
             +  IGT V        S GKNDFSE V TPS
Subjt:  -----YKGIGTKVALI----DSTGKNDFSEFVATPS

XP_023541412.1 methyl-CpG-binding domain-containing protein 13 isoform X2 [Cucurbita pepo subsp. pepo]1.2e-2252.94Show/hide
Query:  FYIDPVNRKKCTSL-DKGCTPSTGKVSRLAYKLRNQRNNYIEFQHDDISSLAAPKKEMQAIGKARRQIIWSESSSEPSEITNDEAIFPKCYK--------
        FYIDPVN     S+ +     ++G VSRLAYK R+QR   +EFQHDDISS A PKKEMQAIGKARRQIIW+E+  EP EITNDEAIFP            
Subjt:  FYIDPVNRKKCTSL-DKGCTPSTGKVSRLAYKLRNQRNNYIEFQHDDISSLAAPKKEMQAIGKARRQIIWSESSSEPSEITNDEAIFPKCYK--------

Query:  ---------GIGTKVALI--DSTGKNDFSEFVATPS
                 GI    + +   S GKNDF E V TPS
Subjt:  ---------GIGTKVALI--DSTGKNDFSEFVATPS

XP_023552461.1 methyl-CpG-binding domain-containing protein 13-like isoform X1 [Cucurbita pepo subsp. pepo]5.3e-2347.31Show/hide
Query:  FYIDPVNRKKCTSL-DKGCTPSTGKVSRLAYKLRNQ--RNNYIEFQHDDISSLAAPKKEMQAIGKARRQIIWSESSSEPSEITNDEAIFPKCYKGIGTKV
        FYI+PVN     SL D     ++GKVSRLAYK R+Q   N+ IEFQHDDISS A  KKEM AIGKA+RQIIWS++S EPSEI +DEAIFPK    +G ++
Subjt:  FYIDPVNRKKCTSL-DKGCTPSTGKVSRLAYKLRNQ--RNNYIEFQHDDISSLAAPKKEMQAIGKARRQIIWSESSSEPSEITNDEAIFPKCYKGIGTKV

Query:  ALI-------------------------DSTGKNDFSEFVATPSLIDKSVYREHLALSVANLVEFSK
        A +                          S GKN FSEFV+TP   DKS+  +  + + A  +E  K
Subjt:  ALI-------------------------DSTGKNDFSEFVATPSLIDKSVYREHLALSVANLVEFSK

XP_023552462.1 methyl-CpG-binding domain-containing protein 13-like isoform X2 [Cucurbita pepo subsp. pepo]3.1e-2347.31Show/hide
Query:  FYIDPVNRKKCTSL-DKGCTPSTGKVSRLAYKLRNQ--RNNYIEFQHDDISSLAAPKKEMQAIGKARRQIIWSESSSEPSEITNDEAIFPKCYKGIGTKV
        FYI+PVN     SL D     ++GKVSRLAYK R+Q   N+ IEFQHDDISS A  KKEM AIGKA+RQIIWS++S EPSEI +DEAIFPK    +G ++
Subjt:  FYIDPVNRKKCTSL-DKGCTPSTGKVSRLAYKLRNQ--RNNYIEFQHDDISSLAAPKKEMQAIGKARRQIIWSESSSEPSEITNDEAIFPKCYKGIGTKV

Query:  ALI-------------------------DSTGKNDFSEFVATPSLIDKSVYREHLALSVANLVEFSK
        A +                          S GKN+FSEFV+TP   DKS+  +  + + A  +E  K
Subjt:  ALI-------------------------DSTGKNDFSEFVATPSLIDKSVYREHLALSVANLVEFSK

XP_023552463.1 methyl-CpG-binding domain-containing protein 13-like isoform X3 [Cucurbita pepo subsp. pepo]5.3e-2347.31Show/hide
Query:  FYIDPVNRKKCTSL-DKGCTPSTGKVSRLAYKLRNQ--RNNYIEFQHDDISSLAAPKKEMQAIGKARRQIIWSESSSEPSEITNDEAIFPKCYKGIGTKV
        FYI+PVN     SL D     ++GKVSRLAYK R+Q   N+ IEFQHDDISS A  KKEM AIGKA+RQIIWS++S EPSEI +DEAIFPK    +G ++
Subjt:  FYIDPVNRKKCTSL-DKGCTPSTGKVSRLAYKLRNQ--RNNYIEFQHDDISSLAAPKKEMQAIGKARRQIIWSESSSEPSEITNDEAIFPKCYKGIGTKV

Query:  ALI-------------------------DSTGKNDFSEFVATPSLIDKSVYREHLALSVANLVEFSK
        A +                          S GKN FSEFV+TP   DKS+  +  + + A  +E  K
Subjt:  ALI-------------------------DSTGKNDFSEFVATPSLIDKSVYREHLALSVANLVEFSK

TrEMBL top hitse value%identityAlignment
A0A6J1FZ39 methyl-CpG-binding domain-containing protein 13 isoform X11.3e-2252.86Show/hide
Query:  FYIDPVNRKKCTSL-DKGCTPSTGKVSRLAYKLRNQRNNYIEFQHDDISSLAAPKKEMQAIGKARRQIIWSESSSEPSEITNDEAIFPKCYK--------
        FYIDPVN     S+ +     ++G VSRLAYK R+QR   +EFQHDDISS A  KKEMQAIGKARRQIIW+E+  EP EITNDEAIFP            
Subjt:  FYIDPVNRKKCTSL-DKGCTPSTGKVSRLAYKLRNQRNNYIEFQHDDISSLAAPKKEMQAIGKARRQIIWSESSSEPSEITNDEAIFPKCYK--------

Query:  -----------GIGTKVALI----DSTGKNDFSEFVATPS
                    IGT V        S GKNDFSE V TPS
Subjt:  -----------GIGTKVALI----DSTGKNDFSEFVATPS

A0A6J1J2L9 methyl-CpG-binding domain-containing protein 13-like isoform X11.3e-2247.59Show/hide
Query:  FYIDPVNRKKCTSL-DKGCTPSTGKVSRLAYKLRNQ--RNNYIEFQHDDISSLAAPKKEMQAIGKARRQIIWSESSSEPSEITNDEAIFPKC--------
        FYI+PVN     SL D     ++GKVSRLAYK R+Q   N+ IEFQHDDISS +  KKEM AIGKA+RQIIWS++S EPSEI +DEAIFPK         
Subjt:  FYIDPVNRKKCTSL-DKGCTPSTGKVSRLAYKLRNQ--RNNYIEFQHDDISSLAAPKKEMQAIGKARRQIIWSESSSEPSEITNDEAIFPKC--------

Query:  -------YKGIGTKVALI---------DSTGKNDFSEFVATPSLIDKSVYREHLALSVANLVEFSK
               +  IG K+             S GKN FSEFV+TP   DKS+  +  + + A  +E  K
Subjt:  -------YKGIGTKVALI---------DSTGKNDFSEFVATPSLIDKSVYREHLALSVANLVEFSK

A0A6J1J920 methyl-CpG-binding domain-containing protein 13-like isoform X47.5e-2347.31Show/hide
Query:  QFYIDPVNRKKCTSL-DKGCTPSTGKVSRLAYKLRNQ--RNNYIEFQHDDISSLAAPKKEMQAIGKARRQIIWSESSSEPSEITNDEAIFPKC-------
        +FYI+PVN     SL D     ++GKVSRLAYK R+Q   N+ IEFQHDDISS +  KKEM AIGKA+RQIIWS++S EPSEI +DEAIFPK        
Subjt:  QFYIDPVNRKKCTSL-DKGCTPSTGKVSRLAYKLRNQ--RNNYIEFQHDDISSLAAPKKEMQAIGKARRQIIWSESSSEPSEITNDEAIFPKC-------

Query:  --------YKGIGTKVALI---------DSTGKNDFSEFVATPSLIDKSVYREHLALSVANLVEFSK
                +  IG K+             S GKN FSEFV+TP   DKS+  +  + + A  +E  K
Subjt:  --------YKGIGTKVALI---------DSTGKNDFSEFVATPSLIDKSVYREHLALSVANLVEFSK

A0A6J1JB13 methyl-CpG-binding domain-containing protein 13-like isoform X31.3e-2247.59Show/hide
Query:  FYIDPVNRKKCTSL-DKGCTPSTGKVSRLAYKLRNQ--RNNYIEFQHDDISSLAAPKKEMQAIGKARRQIIWSESSSEPSEITNDEAIFPKC--------
        FYI+PVN     SL D     ++GKVSRLAYK R+Q   N+ IEFQHDDISS +  KKEM AIGKA+RQIIWS++S EPSEI +DEAIFPK         
Subjt:  FYIDPVNRKKCTSL-DKGCTPSTGKVSRLAYKLRNQ--RNNYIEFQHDDISSLAAPKKEMQAIGKARRQIIWSESSSEPSEITNDEAIFPKC--------

Query:  -------YKGIGTKVALI---------DSTGKNDFSEFVATPSLIDKSVYREHLALSVANLVEFSK
               +  IG K+             S GKN FSEFV+TP   DKS+  +  + + A  +E  K
Subjt:  -------YKGIGTKVALI---------DSTGKNDFSEFVATPSLIDKSVYREHLALSVANLVEFSK

A0A6J1JB16 methyl-CpG-binding domain-containing protein 13-like isoform X21.3e-2247.59Show/hide
Query:  FYIDPVNRKKCTSL-DKGCTPSTGKVSRLAYKLRNQ--RNNYIEFQHDDISSLAAPKKEMQAIGKARRQIIWSESSSEPSEITNDEAIFPKC--------
        FYI+PVN     SL D     ++GKVSRLAYK R+Q   N+ IEFQHDDISS +  KKEM AIGKA+RQIIWS++S EPSEI +DEAIFPK         
Subjt:  FYIDPVNRKKCTSL-DKGCTPSTGKVSRLAYKLRNQ--RNNYIEFQHDDISSLAAPKKEMQAIGKARRQIIWSESSSEPSEITNDEAIFPKC--------

Query:  -------YKGIGTKVALI---------DSTGKNDFSEFVATPSLIDKSVYREHLALSVANLVEFSK
               +  IG K+             S GKN FSEFV+TP   DKS+  +  + + A  +E  K
Subjt:  -------YKGIGTKVALI---------DSTGKNDFSEFVATPSLIDKSVYREHLALSVANLVEFSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGACATTGGCTTTGAGAAGAGTCGAAGAGTCGAAATTGGCCGATCAACGCCATTATTGGCGTTGAGGAGAAGGTTTTTGTTATGGTGCATTACTGGGAGCGATCA
TTGCTGCTTGGGCATGATGCTACTGTGGCTGATGGCAATGGTTCCAATGGCTCCACTCACAAACTTGCAATTTTACATTGATCCTGTTAATAGAAAGAAATGCACTTCAC
TCGATAAGGGATGTACACCTTCTACTGGAAAGGTGAGCCGGTTAGCATATAAATTAAGGAACCAGAGAAACAACTATATTGAGTTTCAACATGATGATATCTCTTCACTT
GCTGCACCCAAGAAAGAGATGCAAGCGATTGGCAAAGCAAGGAGACAGATTATATGGAGTGAGAGTTCATCAGAACCCAGTGAAATAACAAATGATGAAGCTATTTTTCC
AAAATGCTACAAGGGAATAGGCACTAAAGTTGCATTGATCGACTCTACCGGAAAGAATGATTTTTCTGAATTTGTGGCGACTCCCAGCTTGATAGATAAATCAGTTTATA
GGGAACACTTAGCTCTCAGTGTTGCAAACTTGGTTGAATTCTCTAAGGTAGACATCTTTCAACATGCTCAAGATTGTCCTATGCTGGAATGGGAGCACAACCTTTTTAGT
CCGAACAATCCCAAAGTAGACAACTTTGAACAAGCTCAAGATAGTTCCATGCATCAACTGCAATTTCAACTACCAAAAAGTTCAAGATTGTCCCAGGTAGGAAGATCAGA
TCCAACAGAAATCCCGTTCGGACATACGGTTCCCGTGGAAGATCAAGTTGGTGAGCCGTGTGATGGGAAACCTTCCCGCGCAGTTCGATTGGAGTGTAGGTGTTCAAAAG
GTAGAGTTCTTTCAAATAATCTCAAGAACTCAAGATTGTCCCATGTAGACATGTTTGAAAAAGTTCAAGATTGTCCCATGCCGGCATTGGAGCTCAATTGGAGTATTAGG
ATTCTTGTAGGCATCTATCATATCAACAAGCTCAAGATTTTCACATACAGGAACGTGAGTTCAACTGGAGTGTTACGAATCTTGATAAAGTTGACTTTCTTAGTTGGAAC
AGTTCCAAAGTATTGGAGCAATTGGAGTGGTGGGACTCTTGATAAGATTGATTTTCTTGGTAGACAACTTCAACGATCTCGAGATTGTCCCATACAAGCATTGGAGCTCC
ATTGGAGTGTTCGAACTCTAAATAAGATTGACCTTCTTAGTTCGAAGAATACTAAAGAATGGAAGCTCGATTGGAGTGTTACAACTCTTGATGAGGTGTATCTCATTAGT
TGGAACAATCCCAAAATATCTTTCAACAAGCTCAAGATTGTCCCATGCAGGAATGGAGACTCGAGTGGAGTGTTAAAACCCATCATAAGGTCGACCTTCTTTGTTGGAAC
AATCTCAAAACGACTTTCGAATAAGCTCAAGATTGTCCCATGTAGGGTTGGAGCTCAATTGGAGTATTACGACTCTGGCATTGGAGCTCAATCGAAGTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCGACATTGGCTTTGAGAAGAGTCGAAGAGTCGAAATTGGCCGATCAACGCCATTATTGGCGTTGAGGAGAAGGTTTTTGTTATGGTGCATTACTGGGAGCGATCA
TTGCTGCTTGGGCATGATGCTACTGTGGCTGATGGCAATGGTTCCAATGGCTCCACTCACAAACTTGCAATTTTACATTGATCCTGTTAATAGAAAGAAATGCACTTCAC
TCGATAAGGGATGTACACCTTCTACTGGAAAGGTGAGCCGGTTAGCATATAAATTAAGGAACCAGAGAAACAACTATATTGAGTTTCAACATGATGATATCTCTTCACTT
GCTGCACCCAAGAAAGAGATGCAAGCGATTGGCAAAGCAAGGAGACAGATTATATGGAGTGAGAGTTCATCAGAACCCAGTGAAATAACAAATGATGAAGCTATTTTTCC
AAAATGCTACAAGGGAATAGGCACTAAAGTTGCATTGATCGACTCTACCGGAAAGAATGATTTTTCTGAATTTGTGGCGACTCCCAGCTTGATAGATAAATCAGTTTATA
GGGAACACTTAGCTCTCAGTGTTGCAAACTTGGTTGAATTCTCTAAGGTAGACATCTTTCAACATGCTCAAGATTGTCCTATGCTGGAATGGGAGCACAACCTTTTTAGT
CCGAACAATCCCAAAGTAGACAACTTTGAACAAGCTCAAGATAGTTCCATGCATCAACTGCAATTTCAACTACCAAAAAGTTCAAGATTGTCCCAGGTAGGAAGATCAGA
TCCAACAGAAATCCCGTTCGGACATACGGTTCCCGTGGAAGATCAAGTTGGTGAGCCGTGTGATGGGAAACCTTCCCGCGCAGTTCGATTGGAGTGTAGGTGTTCAAAAG
GTAGAGTTCTTTCAAATAATCTCAAGAACTCAAGATTGTCCCATGTAGACATGTTTGAAAAAGTTCAAGATTGTCCCATGCCGGCATTGGAGCTCAATTGGAGTATTAGG
ATTCTTGTAGGCATCTATCATATCAACAAGCTCAAGATTTTCACATACAGGAACGTGAGTTCAACTGGAGTGTTACGAATCTTGATAAAGTTGACTTTCTTAGTTGGAAC
AGTTCCAAAGTATTGGAGCAATTGGAGTGGTGGGACTCTTGATAAGATTGATTTTCTTGGTAGACAACTTCAACGATCTCGAGATTGTCCCATACAAGCATTGGAGCTCC
ATTGGAGTGTTCGAACTCTAAATAAGATTGACCTTCTTAGTTCGAAGAATACTAAAGAATGGAAGCTCGATTGGAGTGTTACAACTCTTGATGAGGTGTATCTCATTAGT
TGGAACAATCCCAAAATATCTTTCAACAAGCTCAAGATTGTCCCATGCAGGAATGGAGACTCGAGTGGAGTGTTAAAACCCATCATAAGGTCGACCTTCTTTGTTGGAAC
AATCTCAAAACGACTTTCGAATAAGCTCAAGATTGTCCCATGTAGGGTTGGAGCTCAATTGGAGTATTACGACTCTGGCATTGGAGCTCAATCGAAGTATTAG
Protein sequenceShow/hide protein sequence
MFDIGFEKSRRVEIGRSTPLLALRRRFLLWCITGSDHCCLGMMLLWLMAMVPMAPLTNLQFYIDPVNRKKCTSLDKGCTPSTGKVSRLAYKLRNQRNNYIEFQHDDISSL
AAPKKEMQAIGKARRQIIWSESSSEPSEITNDEAIFPKCYKGIGTKVALIDSTGKNDFSEFVATPSLIDKSVYREHLALSVANLVEFSKVDIFQHAQDCPMLEWEHNLFS
PNNPKVDNFEQAQDSSMHQLQFQLPKSSRLSQVGRSDPTEIPFGHTVPVEDQVGEPCDGKPSRAVRLECRCSKGRVLSNNLKNSRLSHVDMFEKVQDCPMPALELNWSIR
ILVGIYHINKLKIFTYRNVSSTGVLRILIKLTFLVGTVPKYWSNWSGGTLDKIDFLGRQLQRSRDCPIQALELHWSVRTLNKIDLLSSKNTKEWKLDWSVTTLDEVYLIS
WNNPKISFNKLKIVPCRNGDSSGVLKPIIRSTFFVGTISKRLSNKLKIVPCRVGAQLEYYDSGIGAQSKY