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Lag0030876 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0030876
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr11:2348518..2348901
RNA-Seq ExpressionLag0030876
SyntenyLag0030876
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607014.1 Protein PTST, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.6e-1362.07Show/hide
Query:  AAAVATGTVMAILVLTLSASNCNAASLSPSSFGNETDDAAATSMWCDSHTEECLVGEDDVGDYSAFPSLAAKQIKFNSGRTGDGSKP
        AAA     V AI+VLTL+ASN NAASLS S+FGNET DA A S WCD  TEECLVG+DDV D S F SLA   +   SGRTG+ ++P
Subjt:  AAAVATGTVMAILVLTLSASNCNAASLSPSSFGNETDDAAATSMWCDSHTEECLVGEDDVGDYSAFPSLAAKQIKFNSGRTGDGSKP

KAG6607070.1 hypothetical protein SDJN03_00412, partial [Cucurbita argyrosperma subsp. sororia]1.7e-1548.82Show/hide
Query:  MKHSSNTGAATAAAVATGTVMAILVLTLSASNCNAASLSPSSFGNETDDAAATSMWCDSHTEECLVGEDDVGDYSAFPSLAAKQIKFNSGRTGDGSKPVC
        M HSSN+GA  AAA A    M + +L LS S+C+ AS +PSS+GN T  AAA SMWCD   EEC+  EDD    SAFPSL A   KF S  T + +KPVC
Subjt:  MKHSSNTGAATAAAVATGTVMAILVLTLSASNCNAASLSPSSFGNETDDAAATSMWCDSHTEECLVGEDDVGDYSAFPSLAAKQIKFNSGRTGDGSKPVC

Query:  TRPGRY-DCLGSKGKIPKQETKSPYKR
         RPG Y  C  ++    K +    Y R
Subjt:  TRPGRY-DCLGSKGKIPKQETKSPYKR

KAG6607071.1 hypothetical protein SDJN03_00413, partial [Cucurbita argyrosperma subsp. sororia]2.3e-1243.31Show/hide
Query:  MKHSSNTGAATAAAVATGTVMAILVLTLSASNCNAASLSPSSFGNETDDAAATSMWCDSHTEECLVGEDDVGDYSAFPSLAAKQIKFNSGRTGDGSKPVC
        M HSSN+G   AAA      M + +L LS S+CN AS +PSS+GN T  AAA SMWCD   EEC+  E D    SAFPSL     K+ S  + + +K VC
Subjt:  MKHSSNTGAATAAAVATGTVMAILVLTLSASNCNAASLSPSSFGNETDDAAATSMWCDSHTEECLVGEDDVGDYSAFPSLAAKQIKFNSGRTGDGSKPVC

Query:  TRPGRY-DCLGSKGKIPKQETKSPYKR
         RP  Y  C   +   P       Y R
Subjt:  TRPGRY-DCLGSKGKIPKQETKSPYKR

KGN57814.1 hypothetical protein Csa_009509 [Cucumis sativus]2.3e-1246.83Show/hide
Query:  MKHSSNTGAATAAAVATGTV---MAILVLTLSASNCNAASLSPSSFGNETDDAAATSMWCDSHTEECLVG-EDDVGDYSAFPSLAAKQIKFNSGRTGDGS
        M HSSNT  + A    T  V   + ++V T+ AS+C AASL+ S+ GNET  AA +S WC+S  +ECL+G EDD  + SAFPSL      +N+ RT +G 
Subjt:  MKHSSNTGAATAAAVATGTV---MAILVLTLSASNCNAASLSPSSFGNETDDAAATSMWCDSHTEECLVG-EDDVGDYSAFPSLAAKQIKFNSGRTGDGS

Query:  KPVCTRPGRYD---CLGSKGKIPKQE
        K VC R GRYD   CL  K   P Q+
Subjt:  KPVCTRPGRYD---CLGSKGKIPKQE

TrEMBL top hitse value%identityAlignment
A0A0A0LA12 Uncharacterized protein1.1e-1246.83Show/hide
Query:  MKHSSNTGAATAAAVATGTV---MAILVLTLSASNCNAASLSPSSFGNETDDAAATSMWCDSHTEECLVG-EDDVGDYSAFPSLAAKQIKFNSGRTGDGS
        M HSSNT  + A    T  V   + ++V T+ AS+C AASL+ S+ GNET  AA +S WC+S  +ECL+G EDD  + SAFPSL      +N+ RT +G 
Subjt:  MKHSSNTGAATAAAVATGTV---MAILVLTLSASNCNAASLSPSSFGNETDDAAATSMWCDSHTEECLVG-EDDVGDYSAFPSLAAKQIKFNSGRTGDGS

Query:  KPVCTRPGRYD---CLGSKGKIPKQE
        K VC R GRYD   CL  K   P Q+
Subjt:  KPVCTRPGRYD---CLGSKGKIPKQE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCATTCTTCAAACACCGGAGCTGCAACGGCGGCAGCGGTGGCGACGGGGACGGTAATGGCTATCCTAGTCTTGACACTAAGCGCAAGCAACTGCAATGCTGCTTC
TCTAAGTCCTTCCAGTTTCGGCAACGAGACCGACGACGCCGCTGCAACATCGATGTGGTGCGACAGTCACACCGAAGAATGCCTCGTCGGAGAAGACGACGTCGGCGACT
ACTCGGCATTTCCGAGCCTTGCAGCCAAGCAGATTAAGTTCAATAGTGGGCGGACTGGAGATGGAAGCAAGCCAGTATGTACTCGGCCAGGAAGATATGACTGTCTTGGC
TCGAAAGGCAAAATCCCCAAGCAAGAAACTAAGAGCCCATATAAACGCAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGCATTCTTCAAACACCGGAGCTGCAACGGCGGCAGCGGTGGCGACGGGGACGGTAATGGCTATCCTAGTCTTGACACTAAGCGCAAGCAACTGCAATGCTGCTTC
TCTAAGTCCTTCCAGTTTCGGCAACGAGACCGACGACGCCGCTGCAACATCGATGTGGTGCGACAGTCACACCGAAGAATGCCTCGTCGGAGAAGACGACGTCGGCGACT
ACTCGGCATTTCCGAGCCTTGCAGCCAAGCAGATTAAGTTCAATAGTGGGCGGACTGGAGATGGAAGCAAGCCAGTATGTACTCGGCCAGGAAGATATGACTGTCTTGGC
TCGAAAGGCAAAATCCCCAAGCAAGAAACTAAGAGCCCATATAAACGCAAGTAG
Protein sequenceShow/hide protein sequence
MKHSSNTGAATAAAVATGTVMAILVLTLSASNCNAASLSPSSFGNETDDAAATSMWCDSHTEECLVGEDDVGDYSAFPSLAAKQIKFNSGRTGDGSKPVCTRPGRYDCLG
SKGKIPKQETKSPYKRK