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Lag0030896 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0030896
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr11:2578827..2579242
RNA-Seq ExpressionLag0030896
SyntenyLag0030896
Gene Ontology termsGO:0044260 - cellular macromolecule metabolic process (biological process)
GO:0050896 - response to stimulus (biological process)
GO:0090304 - nucleic acid metabolic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0005488 - binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW16952.1 LINE-1 reverse transcriptase-like [Vitis vinifera]4.9e-1636.19Show/hide
Query:  MEKLVRDFFWGNRDSHGCSHLVNWDKTSLPLNFGGLGIGAYKQKNNALLLKWMWRFSQQEDALWRKIVVSIYDIDQRGFKANKGDEVLFWKYKWVGNDTS
        +EKL RDF WG   +   +HLVNW++  +    GGLG+      N ALL KW+WRF+  ++ +W+ ++V+ Y  ++ G++  KG ++ FWK  W G    
Subjt:  MEKLVRDFFWGNRDSHGCSHLVNWDKTSLPLNFGGLGIGAYKQKNNALLLKWMWRFSQQEDALWRKIVVSIYDIDQRGFKANKGDEVLFWKYKWVGNDTS

Query:  SFHLP
        +   P
Subjt:  SFHLP

RVW28164.1 Calcium-transporting ATPase 10, plasma membrane-type [Vitis vinifera]2.9e-1640Show/hide
Query:  MEKLVRDFFWGNRDSHGCSHLVNWDKTSLPLNFGGLGIGAYKQKNNALLLKWMWRFSQQEDALWRKIVVSIYDIDQRGFKANKGDEVLFWKYKWVGNDTS
        +EKL RDF WG   +   +HLV+W+K  +    GGLG+    Q N ALL KW+WRF++ +D +W++++V+ Y   Q  F   KG ++ FWK  W G+   
Subjt:  MEKLVRDFFWGNRDSHGCSHLVNWDKTSLPLNFGGLGIGAYKQKNNALLLKWMWRFSQQEDALWRKIVVSIYDIDQRGFKANKGDEVLFWKYKWVGNDTS

Query:  SFHLP
        +  LP
Subjt:  SFHLP

RVX23539.1 Protease Do-like 10, mitochondrial [Vitis vinifera]3.2e-1538.89Show/hide
Query:  MEKLVRDFFWGNRDSHGCSHLVNWDKTSLPLNFGGLGIGAYKQKNNALLLKWMWRFSQQEDALWRKIVVSIYDIDQRGFK---ANKGDEVLFWKYKWVGN
        +E++ RDF WG     G +HL+NW     P   GGLGI      N ALL KW+WR++ ++D LW+ ++   Y  +  G+K     KG+ VLFW  KW GN
Subjt:  MEKLVRDFFWGNRDSHGCSHLVNWDKTSLPLNFGGLGIGAYKQKNNALLLKWMWRFSQQEDALWRKIVVSIYDIDQRGFK---ANKGDEVLFWKYKWVGN

Query:  DTSSFHLP
        +  +   P
Subjt:  DTSSFHLP

XP_022151711.1 uncharacterized protein LOC111019624 [Momordica charantia]1.4e-1534.07Show/hide
Query:  MEKLVRDFFWGNRDSHGCSHLVNWDKTSLPLNFGGLGIGAYKQKNNALLLKWMWRFSQQEDALWRKIVVSIYD---------------------------
        +EK++RDF W   +  G +HLVNW + S PL  GGLG+G  + +N A L KW+WRF  +  ALWRKI+VS Y+                           
Subjt:  MEKLVRDFFWGNRDSHGCSHLVNWDKTSLPLNFGGLGIGAYKQKNNALLLKWMWRFSQQEDALWRKIVVSIYD---------------------------

Query:  -IDQRGFKANKGD--EVLFWKYKWVGNDTSSFHLP
         +     + + GD     FW+  W+GN   S   P
Subjt:  -IDQRGFKANKGD--EVLFWKYKWVGNDTSSFHLP

XP_022158566.1 uncharacterized protein LOC111025019 [Momordica charantia]1.4e-2644.88Show/hide
Query:  MEKLVRDFFWGNRDSHGCSHLVNWDKTSLPLNFGGLGIGAYKQKNNALLLKWMWRFSQQEDALWRKIVVSIYDIDQRG----------------------
        M K+VRD FW    SHGC +LV WD +SLP+  GGLGIGA+  KNNALL+KW+W F+++E+ALWR+++ SIY +D+ G                      
Subjt:  MEKLVRDFFWGNRDSHGCSHLVNWDKTSLPLNFGGLGIGAYKQKNNALLLKWMWRFSQQEDALWRKIVVSIYDIDQRG----------------------

Query:  --------FKANKGDEVLFWKYKWVGN
                FKAN+GD + FW  KW GN
Subjt:  --------FKANKGDEVLFWKYKWVGN

TrEMBL top hitse value%identityAlignment
A0A2N9EI19 Uncharacterized protein8.2e-1744.12Show/hide
Query:  MEKLVRDFFWGNRDSHGCSHLVNWDKTSLPLNFGGLGIGAYKQKNNALLLKWMWRFSQQEDALWRKIVVSIYDIDQRGFKAN--KGDEVLFWKYKWVGND
        +EKL RDF WG        HLV WDK   P   GGLG+ +    N ALL KW+WRF  + D LWR+++++ +  D  G++    +G  V FWK KW G D
Subjt:  MEKLVRDFFWGNRDSHGCSHLVNWDKTSLPLNFGGLGIGAYKQKNNALLLKWMWRFSQQEDALWRKIVVSIYDIDQRGFKAN--KGDEVLFWKYKWVGND

Query:  TS
        TS
Subjt:  TS

A0A438C135 LINE-1 reverse transcriptase-like2.4e-1636.19Show/hide
Query:  MEKLVRDFFWGNRDSHGCSHLVNWDKTSLPLNFGGLGIGAYKQKNNALLLKWMWRFSQQEDALWRKIVVSIYDIDQRGFKANKGDEVLFWKYKWVGNDTS
        +EKL RDF WG   +   +HLVNW++  +    GGLG+      N ALL KW+WRF+  ++ +W+ ++V+ Y  ++ G++  KG ++ FWK  W G    
Subjt:  MEKLVRDFFWGNRDSHGCSHLVNWDKTSLPLNFGGLGIGAYKQKNNALLLKWMWRFSQQEDALWRKIVVSIYDIDQRGFKANKGDEVLFWKYKWVGNDTS

Query:  SFHLP
        +   P
Subjt:  SFHLP

A0A438CY86 Calcium-transporting ATPase 10, plasma membrane-type1.4e-1640Show/hide
Query:  MEKLVRDFFWGNRDSHGCSHLVNWDKTSLPLNFGGLGIGAYKQKNNALLLKWMWRFSQQEDALWRKIVVSIYDIDQRGFKANKGDEVLFWKYKWVGNDTS
        +EKL RDF WG   +   +HLV+W+K  +    GGLG+    Q N ALL KW+WRF++ +D +W++++V+ Y   Q  F   KG ++ FWK  W G+   
Subjt:  MEKLVRDFFWGNRDSHGCSHLVNWDKTSLPLNFGGLGIGAYKQKNNALLLKWMWRFSQQEDALWRKIVVSIYDIDQRGFKANKGDEVLFWKYKWVGNDTS

Query:  SFHLP
        +  LP
Subjt:  SFHLP

A0A6J1E196 uncharacterized protein LOC1110250196.7e-2744.88Show/hide
Query:  MEKLVRDFFWGNRDSHGCSHLVNWDKTSLPLNFGGLGIGAYKQKNNALLLKWMWRFSQQEDALWRKIVVSIYDIDQRG----------------------
        M K+VRD FW    SHGC +LV WD +SLP+  GGLGIGA+  KNNALL+KW+W F+++E+ALWR+++ SIY +D+ G                      
Subjt:  MEKLVRDFFWGNRDSHGCSHLVNWDKTSLPLNFGGLGIGAYKQKNNALLLKWMWRFSQQEDALWRKIVVSIYDIDQRG----------------------

Query:  --------FKANKGDEVLFWKYKWVGN
                FKAN+GD + FW  KW GN
Subjt:  --------FKANKGDEVLFWKYKWVGN

M5W794 Reverse transcriptase domain-containing protein (Fragment)1.8e-1640.62Show/hide
Query:  MEKLVRDFFW-GNRDSHGCSHLVNWDKTSLPLNFGGLGIGAYKQKNNALLLKWMWRFSQQEDALWRKIVVSIYDIDQRGFKANKGDEVLFWKYKWV
        +E+L+R+F W G  D   C HLV W++ +     GGLGIG+ +++N AL  KW+WRF  + ++LW +I+ S Y ID  GF    G+++ FW+  W+
Subjt:  MEKLVRDFFW-GNRDSHGCSHLVNWDKTSLPLNFGGLGIGAYKQKNNALLLKWMWRFSQQEDALWRKIVVSIYDIDQRGFKANKGDEVLFWKYKWV

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657502.1e-0935.53Show/hide
Query:  MEKLVRDFFWGNRDSHGCSHLVNWDKTSLPLNFGGLGIGAYKQKNNALLLKWMWRFSQQEDALWRKIVVSIYDIDQ
        +++L R F WG+       HLV W K   P   GGLG+ A K  N AL+ K  WR  Q++++LW  ++   Y + +
Subjt:  MEKLVRDFFWGNRDSHGCSHLVNWDKTSLPLNFGGLGIGAYKQKNNALLLKWMWRFSQQEDALWRKIVVSIYDIDQ

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAGCTTGTTAGAGATTTTTTCTGGGGCAATAGAGACAGTCATGGGTGTAGCCACCTTGTCAATTGGGATAAAACTTCTCTTCCTCTGAATTTTGGAGGCCTTGG
TATTGGTGCCTATAAGCAGAAAAACAACGCTTTGCTTTTAAAATGGATGTGGCGCTTTAGTCAGCAAGAAGATGCCCTTTGGAGGAAAATAGTGGTGAGCATCTACGACA
TAGACCAAAGAGGTTTCAAAGCTAACAAGGGAGATGAAGTTCTTTTTTGGAAGTACAAATGGGTTGGGAATGATACCTCTAGCTTCCACCTTCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAGCTTGTTAGAGATTTTTTCTGGGGCAATAGAGACAGTCATGGGTGTAGCCACCTTGTCAATTGGGATAAAACTTCTCTTCCTCTGAATTTTGGAGGCCTTGG
TATTGGTGCCTATAAGCAGAAAAACAACGCTTTGCTTTTAAAATGGATGTGGCGCTTTAGTCAGCAAGAAGATGCCCTTTGGAGGAAAATAGTGGTGAGCATCTACGACA
TAGACCAAAGAGGTTTCAAAGCTAACAAGGGAGATGAAGTTCTTTTTTGGAAGTACAAATGGGTTGGGAATGATACCTCTAGCTTCCACCTTCCCTGA
Protein sequenceShow/hide protein sequence
MEKLVRDFFWGNRDSHGCSHLVNWDKTSLPLNFGGLGIGAYKQKNNALLLKWMWRFSQQEDALWRKIVVSIYDIDQRGFKANKGDEVLFWKYKWVGNDTSSFHLP