; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0030913 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0030913
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr11:2799681..2801317
RNA-Seq ExpressionLag0030913
SyntenyLag0030913
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN75028.1 hypothetical protein VITISV_026823 [Vitis vinifera]1.3e-8738.21Show/hide
Query:  LGGYPKKVSFWQPVIDKIQKKLDRWRRFNLSRGGRLTLCNSVLSSIPLYYMSSFLMPSKVVSKVEQLIRSFLWEGSNGSKLNHLARWEQASKPLLSGGLG
        LGG PK   FW PV+++I  +LD W++  LS GGR+TL  S LS +P Y++S F MP+ V +K+E+L R FLW G    K +HL RW+   KP   GGLG
Subjt:  LGGYPKKVSFWQPVIDKIQKKLDRWRRFNLSRGGRLTLCNSVLSSIPLYYMSSFLMPSKVVSKVEQLIRSFLWEGSNGSKLNHLARWEQASKPLLSGGLG

Query:  IGGLKNRNLSLLAKWGWRYMREPDSLWCKVVKSIHGPDCYNWHTSGKAGLSLRSPWINISKVWKQFENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSL
        +G +  RNL+LL KW WRY RE  +LW +V+ SI+G     W  +     S R PW  I++V+++F  +  + +GNG RI FW D W  D P   +YP L
Subjt:  IGGLKNRNLSLLAKWGWRYMREPDSLWCKVVKSIHGPDCYNWHTSGKAGLSLRSPWINISKVWKQFENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSL

Query:  FRIAF-PNASVMD-LWDGETISWSISFRRLLKEEEISDFQQLLVCLNDAIVS-EFSDSRIWSLENSGLYSVKSLFNFLAASSSINKEM-FKAIWKSKCPK
        FR+    N S+   L       W+++FRR L + EI D + L+  L+D  +S    D+R+W L +SGL+SVKS F  L+ SS  ++    K +W S+ P 
Subjt:  FRIAF-PNASVMD-LWDGETISWSISFRRLLKEEEISDFQQLLVCLNDAIVS-EFSDSRIWSLENSGLYSVKSLFNFLAASSSINKEM-FKAIWKSKCPK

Query:  RINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICPLCLNASESLQHLFFDCVYSHQCWGKLLSIFKLQWALDQSFKGNVQQLLVGPSVKPISKLLWSNGA
        ++   VW++    +N +++LQ R P  ALSP+IC LC+   ES  HLF  C      W +L  + K+ W   +S    +     G        +LW   +
Subjt:  RINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICPLCLNASESLQHLFFDCVYSHQCWGKLLSIFKLQWALDQSFKGNVQQLLVGPSVKPISKLLWSNGA

Query:  KAVLSELWFERNQRIFHDISLPWVDRFYSARLKASSWCSLSKHFSGFSIQDICLNWEA
         A++  +W+ERN +IF D +      + S    AS W   SK F G  +  I L+W A
Subjt:  KAVLSELWFERNQRIFHDISLPWVDRFYSARLKASSWCSLSKHFSGFSIQDICLNWEA

KAA0035739.1 hypothetical protein E6C27_scaffold403G00100 [Cucumis melo var. makuwa]3.4e-9945.88Show/hide
Query:  IRSFLWEGSNGSKLNHLARWEQASKPLLSGGLGIGGLKNRNLSLLAKWGWRYMREPDSLWCKVVKSIHGPDCYNWHTSGKAGLSLRSPWINISKVWKQFE
        +R+F  EG   SK+N L  W + S P   GGLG+GG+K  N +LLAKWGWRY +E  +LW +V++SIHG + ++W T GK+G SLRSPW+NI++ W+  +
Subjt:  IRSFLWEGSNGSKLNHLARWEQASKPLLSGGLGIGGLKNRNLSLLAKWGWRYMREPDSLWCKVVKSIHGPDCYNWHTSGKAGLSLRSPWINISKVWKQFE

Query:  NLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRIA-FPNASVMDLWDGETISWSISFRRLLKEEEISDFQQLLVCLNDAIVSEFSDSRIWSLENSGLY
        +LASF LGNG RI F +D W+ + P   ++  LFRIA +P  S +        SW ++FRR L++EEI++FQ LL  L+   V    D R WS+E+ G +
Subjt:  NLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRIA-FPNASVMDLWDGETISWSISFRRLLKEEEISDFQQLLVCLNDAIVSEFSDSRIWSLENSGLY

Query:  SVKSLFNFLAASSSINKEMFKAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICPLCLNASESLQHLFFDCVYSHQCWGKLLSIFKLQWA
        S KSL   L  +S ++K +F AI +S  P+RIN L+W+M+F  +  SE+LQ + P + +SPSICPLCL AS++L H+F  C  S   W ++ S+F L W 
Subjt:  SVKSLFNFLAASSSINKEMFKAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICPLCLNASESLQHLFFDCVYSHQCWGKLLSIFKLQWA

Query:  LDQSFKGNVQQLLVGPSVKPISKLLWSNGAKAVLSELWFERNQRIFHDISLPWVDRFYSARLKASSWCSLSKHFSGFSIQDICLNWEA
         D S   +V QLL G ++    +++W   +KA+L E+W ERNQRIFHD +    +  ++A L A++WCSL K F  +SIQDICLNW A
Subjt:  LDQSFKGNVQQLLVGPSVKPISKLLWSNGAKAVLSELWFERNQRIFHDISLPWVDRFYSARLKASSWCSLSKHFSGFSIQDICLNWEA

RVW16209.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]6.0e-8837.88Show/hide
Query:  LGGYPKKVSFWQPVIDKIQKKLDRWRRFNLSRGGRLTLCNSVLSSIPLYYMSSFLMPSKVVSKVEQLIRSFLWEGSNGSKLNHLARWEQASKPLLSGGLG
        LGG PK   FW PV+++I  +LD W++  LS GGR+TL  S L+ +P Y++S F MP+ V +K+E+L R FLW G    K +HL RW+   +P   GGLG
Subjt:  LGGYPKKVSFWQPVIDKIQKKLDRWRRFNLSRGGRLTLCNSVLSSIPLYYMSSFLMPSKVVSKVEQLIRSFLWEGSNGSKLNHLARWEQASKPLLSGGLG

Query:  IGGLKNRNLSLLAKWGWRYMREPDSLWCKVVKSIHGPDCYNWHTSGKAGLSLRSPWINISKVWKQFENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSL
        +G +  RNL+LL KW WRY RE  +LW +V+ SI+G     W  +     S R PW  I++V+++F  +  +  GNG RI FW D W  D P  ++YP L
Subjt:  IGGLKNRNLSLLAKWGWRYMREPDSLWCKVVKSIHGPDCYNWHTSGKAGLSLRSPWINISKVWKQFENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSL

Query:  FRIAF-PNASVMD-LWDGETISWSISFRRLLKEEEISDFQQLLVCLNDAIVS-EFSDSRIWSLENSGLYSVKSLFNFLAASSSINKEM-FKAIWKSKCPK
        FR+    N S+   L       W+++FRR L + EI D + L+  L+D  +S    D+++W L +SGL+SVKS F  L+ SS  ++    K +W S+ P 
Subjt:  FRIAF-PNASVMD-LWDGETISWSISFRRLLKEEEISDFQQLLVCLNDAIVS-EFSDSRIWSLENSGLYSVKSLFNFLAASSSINKEM-FKAIWKSKCPK

Query:  RINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICPLCLNASESLQHLFFDCVYSHQCWGKLLSIFKLQWALDQSFKGNVQQLLVGPSVKPISKLLWSNGA
        ++   VW++    +N +++LQ R P  ALSP IC LC+   ES  HLF  C  +   W +L  + KL W   +S    +     G        +LW   +
Subjt:  RINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICPLCLNASESLQHLFFDCVYSHQCWGKLLSIFKLQWALDQSFKGNVQQLLVGPSVKPISKLLWSNGA

Query:  KAVLSELWFERNQRIFHDISLPWVDRFYSARLKASSWCSLSKHFSGFSIQDICLNWEAFIFP
         A++  +W+ERN RIF D +      + S    AS W   SK F G  +  I L+W A   P
Subjt:  KAVLSELWFERNQRIFHDISLPWVDRFYSARLKASSWCSLSKHFSGFSIQDICLNWEAFIFP

TYK21876.1 hypothetical protein E5676_scaffold494G00090 [Cucumis melo var. makuwa]5.4e-9744.87Show/hide
Query:  IRSFLWEGSNGSKLNHLARWEQASKPLLSGGLGIGGLKNRNLSLLAKWGWRYMREPDSLWCKVVKSIHGPDCYNWHTSGKAGLSLRSPWINISKVWKQFE
        +R+F  EG   SK+N L  W + S     GGLG+GG+K  N +LLAKWGWRY +E  +LW +V++SIHG + ++W T GK+G SLRS W+NI++ W+  +
Subjt:  IRSFLWEGSNGSKLNHLARWEQASKPLLSGGLGIGGLKNRNLSLLAKWGWRYMREPDSLWCKVVKSIHGPDCYNWHTSGKAGLSLRSPWINISKVWKQFE

Query:  NLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRIA-FPNASVMDLWDGETISWSISFRRLLKEEEISDFQQLLVCLNDAIVSEFSDSRIWSLENSGLY
        +LASF LGNG RI F +D W+ + P   ++  LF IA +P    +        SW ++FRR L++EEI++FQ LL  L+   V    D R WS+E+ G +
Subjt:  NLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRIA-FPNASVMDLWDGETISWSISFRRLLKEEEISDFQQLLVCLNDAIVSEFSDSRIWSLENSGLY

Query:  SVKSLFNFLAASSSINKEMFKAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICPLCLNASESLQHLFFDCVYSHQCWGKLLSIFKLQWA
        S KSL   L  +S ++K +F AI +S  P+RIN L+W+M+F  +N SE+LQ + P + +SPSICPLCL AS++L H+F  C  S   W ++ S+F L W 
Subjt:  SVKSLFNFLAASSSINKEMFKAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICPLCLNASESLQHLFFDCVYSHQCWGKLLSIFKLQWA

Query:  LDQSFKGNVQQLLVGPSVKPISKLLWSNGAKAVLSELWFERNQRIFHDISLPWVDRFYSARLKASSWCSLSKHFSGFSIQDICLNWEAFI
         D S   +V QLL G ++    +++W   +KA+L E+W ERNQRIFHD +    +  ++A L A++WCSL K F  +SIQDICLNW  F+
Subjt:  LDQSFKGNVQQLLVGPSVKPISKLLWSNGAKAVLSELWFERNQRIFHDISLPWVDRFYSARLKASSWCSLSKHFSGFSIQDICLNWEAFI

XP_038903695.1 uncharacterized protein LOC120090219 [Benincasa hispida]5.4e-8952.72Show/hide
Query:  SGKAGLSLRSPWINISKVWKQFENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRI-AFPNASVMDLWDGETISWSISFRRLLKEEEISDFQQLLVC
        +GK G SL+SPW++ISK W + E LA+FKLGNGSRIAFWLD+W    PF   + SLFRI   PN SV D WD    SWSI+FRR LK+EE+S FQ LL  
Subjt:  SGKAGLSLRSPWINISKVWKQFENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRI-AFPNASVMDLWDGETISWSISFRRLLKEEEISDFQQLLVC

Query:  LNDAIVSEFSDSRIWSLENSGLYSVKSLFNFLAASSSINKEMFKAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICPLCLNASESLQHL
        +     S   D R+WS+ N+  Y+VKSL N L   S + K +F  IWK+K P+R+N L+W+M+FG LN +EVLQ + P+ +LSP++CP CL+ SE   HL
Subjt:  LNDAIVSEFSDSRIWSLENSGLYSVKSLFNFLAASSSINKEMFKAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICPLCLNASESLQHL

Query:  FFDCVYSHQCWGKLLSIFKLQWALDQSFKGNVQQLLVGPSVKPISKLLWSNGAKAVLSELWFERNQRIFHDISLPWVDRFYSARLKASSWCSLSKHFSGF
        FF C YS  CW KLL  F L   L   FK NV QLL  P+    ++LLW N  KA+L++LWFERNQRIF++ +    DR  +AR +ASSWC LS  F  +
Subjt:  FFDCVYSHQCWGKLLSIFKLQWALDQSFKGNVQQLLVGPSVKPISKLLWSNGAKAVLSELWFERNQRIFHDISLPWVDRFYSARLKASSWCSLSKHFSGF

Query:  SIQDICLNWEAFI
        S+ D  LNWEAFI
Subjt:  SIQDICLNWEAFI

TrEMBL top hitse value%identityAlignment
A0A438BXJ5 Putative ribonuclease H protein1.1e-8737.11Show/hide
Query:  DRVHISILQFADDTLLFC--KYDDAM-LDSLISTIGLL------EW-------WLGGYPKKVSFWQPVIDKIQKKLDRWRRFNLSRGGRLTLCNSVLSSI
        +R  +S LQFADDT+LF   + D+   L SL+   G +      +W        LGG P    FW PVI++I K+LD W++  LS GGR+TL +S LS I
Subjt:  DRVHISILQFADDTLLFC--KYDDAM-LDSLISTIGLL------EW-------WLGGYPKKVSFWQPVIDKIQKKLDRWRRFNLSRGGRLTLCNSVLSSI

Query:  PLYYMSSFLMPSKVVSKVEQLIRSFLWEGSNGSKLNHLARWEQASKPLLSGGLGIGGLKNRNLSLLAKWGWRYMREPDSLWCKVVKSIHGPDCYNWHTSG
        P Y++S F +P+ V +K+E+L R FLW G    K +HL RWE  SKP   GGLGIG +  RN +LL KW WR+ RE  SLW +V+ S++G     W  + 
Subjt:  PLYYMSSFLMPSKVVSKVEQLIRSFLWEGSNGSKLNHLARWEQASKPLLSGGLGIGGLKNRNLSLLAKWGWRYMREPDSLWCKVVKSIHGPDCYNWHTSG

Query:  KAGLSLRSPWINISKVWKQFENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRIA----FPNASVMDLWDGETISWSISFRRLLKEEEISDFQQLLV
            S R PW  I++ ++ F     F +G+G RI FW D W  D     +YP LFR+      P +S+  L      SW+ +FRR L   EI D ++L+ 
Subjt:  KAGLSLRSPWINISKVWKQFENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRIA----FPNASVMDLWDGETISWSISFRRLLKEEEISDFQQLLV

Query:  CLNDAIVSEF-SDSRIWSLENSGLYSVKSLFNFLAASSSINKEM-FKAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICPLCLNASESL
         L+   +S F SD+R WSL +SGL++VKS F  L+     +     K +WKS+ P ++   +W++    +N +++LQ R P  A+SP+IC LC+   ES 
Subjt:  CLNDAIVSEF-SDSRIWSLENSGLYSVKSLFNFLAASSSINKEM-FKAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICPLCLNASESL

Query:  QHLFFDCVYSHQCWGKLLSIFKLQWALDQSFKGNVQQLLVGPSVKPISKLLWSNGAKAVLSELWFERNQRIFHDISLPWVDRFYSARLKASSWCSLSKHF
         HLF  C  +   W +L  + K+ W   +S    +     G        +LW N + A++  +W ERN RIF D +    + + S    AS W   S  F
Subjt:  QHLFFDCVYSHQCWGKLLSIFKLQWALDQSFKGNVQQLLVGPSVKPISKLLWSNGAKAVLSELWFERNQRIFHDISLPWVDRFYSARLKASSWCSLSKHF

Query:  SGFSIQDICLNW
         G  +  + L+W
Subjt:  SGFSIQDICLNW

A0A438BYX6 Transposon TX1 uncharacterized 149 kDa protein2.9e-8837.88Show/hide
Query:  LGGYPKKVSFWQPVIDKIQKKLDRWRRFNLSRGGRLTLCNSVLSSIPLYYMSSFLMPSKVVSKVEQLIRSFLWEGSNGSKLNHLARWEQASKPLLSGGLG
        LGG PK   FW PV+++I  +LD W++  LS GGR+TL  S L+ +P Y++S F MP+ V +K+E+L R FLW G    K +HL RW+   +P   GGLG
Subjt:  LGGYPKKVSFWQPVIDKIQKKLDRWRRFNLSRGGRLTLCNSVLSSIPLYYMSSFLMPSKVVSKVEQLIRSFLWEGSNGSKLNHLARWEQASKPLLSGGLG

Query:  IGGLKNRNLSLLAKWGWRYMREPDSLWCKVVKSIHGPDCYNWHTSGKAGLSLRSPWINISKVWKQFENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSL
        +G +  RNL+LL KW WRY RE  +LW +V+ SI+G     W  +     S R PW  I++V+++F  +  +  GNG RI FW D W  D P  ++YP L
Subjt:  IGGLKNRNLSLLAKWGWRYMREPDSLWCKVVKSIHGPDCYNWHTSGKAGLSLRSPWINISKVWKQFENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSL

Query:  FRIAF-PNASVMD-LWDGETISWSISFRRLLKEEEISDFQQLLVCLNDAIVS-EFSDSRIWSLENSGLYSVKSLFNFLAASSSINKEM-FKAIWKSKCPK
        FR+    N S+   L       W+++FRR L + EI D + L+  L+D  +S    D+++W L +SGL+SVKS F  L+ SS  ++    K +W S+ P 
Subjt:  FRIAF-PNASVMD-LWDGETISWSISFRRLLKEEEISDFQQLLVCLNDAIVS-EFSDSRIWSLENSGLYSVKSLFNFLAASSSINKEM-FKAIWKSKCPK

Query:  RINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICPLCLNASESLQHLFFDCVYSHQCWGKLLSIFKLQWALDQSFKGNVQQLLVGPSVKPISKLLWSNGA
        ++   VW++    +N +++LQ R P  ALSP IC LC+   ES  HLF  C  +   W +L  + KL W   +S    +     G        +LW   +
Subjt:  RINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICPLCLNASESLQHLFFDCVYSHQCWGKLLSIFKLQWALDQSFKGNVQQLLVGPSVKPISKLLWSNGA

Query:  KAVLSELWFERNQRIFHDISLPWVDRFYSARLKASSWCSLSKHFSGFSIQDICLNWEAFIFP
         A++  +W+ERN RIF D +      + S    AS W   SK F G  +  I L+W A   P
Subjt:  KAVLSELWFERNQRIFHDISLPWVDRFYSARLKASSWCSLSKHFSGFSIQDICLNWEAFIFP

A0A5A7T2Y0 zf-RVT domain-containing protein1.6e-9945.88Show/hide
Query:  IRSFLWEGSNGSKLNHLARWEQASKPLLSGGLGIGGLKNRNLSLLAKWGWRYMREPDSLWCKVVKSIHGPDCYNWHTSGKAGLSLRSPWINISKVWKQFE
        +R+F  EG   SK+N L  W + S P   GGLG+GG+K  N +LLAKWGWRY +E  +LW +V++SIHG + ++W T GK+G SLRSPW+NI++ W+  +
Subjt:  IRSFLWEGSNGSKLNHLARWEQASKPLLSGGLGIGGLKNRNLSLLAKWGWRYMREPDSLWCKVVKSIHGPDCYNWHTSGKAGLSLRSPWINISKVWKQFE

Query:  NLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRIA-FPNASVMDLWDGETISWSISFRRLLKEEEISDFQQLLVCLNDAIVSEFSDSRIWSLENSGLY
        +LASF LGNG RI F +D W+ + P   ++  LFRIA +P  S +        SW ++FRR L++EEI++FQ LL  L+   V    D R WS+E+ G +
Subjt:  NLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRIA-FPNASVMDLWDGETISWSISFRRLLKEEEISDFQQLLVCLNDAIVSEFSDSRIWSLENSGLY

Query:  SVKSLFNFLAASSSINKEMFKAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICPLCLNASESLQHLFFDCVYSHQCWGKLLSIFKLQWA
        S KSL   L  +S ++K +F AI +S  P+RIN L+W+M+F  +  SE+LQ + P + +SPSICPLCL AS++L H+F  C  S   W ++ S+F L W 
Subjt:  SVKSLFNFLAASSSINKEMFKAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICPLCLNASESLQHLFFDCVYSHQCWGKLLSIFKLQWA

Query:  LDQSFKGNVQQLLVGPSVKPISKLLWSNGAKAVLSELWFERNQRIFHDISLPWVDRFYSARLKASSWCSLSKHFSGFSIQDICLNWEA
         D S   +V QLL G ++    +++W   +KA+L E+W ERNQRIFHD +    +  ++A L A++WCSL K F  +SIQDICLNW A
Subjt:  LDQSFKGNVQQLLVGPSVKPISKLLWSNGAKAVLSELWFERNQRIFHDISLPWVDRFYSARLKASSWCSLSKHFSGFSIQDICLNWEA

A0A5D3DE60 zf-RVT domain-containing protein2.6e-9744.87Show/hide
Query:  IRSFLWEGSNGSKLNHLARWEQASKPLLSGGLGIGGLKNRNLSLLAKWGWRYMREPDSLWCKVVKSIHGPDCYNWHTSGKAGLSLRSPWINISKVWKQFE
        +R+F  EG   SK+N L  W + S     GGLG+GG+K  N +LLAKWGWRY +E  +LW +V++SIHG + ++W T GK+G SLRS W+NI++ W+  +
Subjt:  IRSFLWEGSNGSKLNHLARWEQASKPLLSGGLGIGGLKNRNLSLLAKWGWRYMREPDSLWCKVVKSIHGPDCYNWHTSGKAGLSLRSPWINISKVWKQFE

Query:  NLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRIA-FPNASVMDLWDGETISWSISFRRLLKEEEISDFQQLLVCLNDAIVSEFSDSRIWSLENSGLY
        +LASF LGNG RI F +D W+ + P   ++  LF IA +P    +        SW ++FRR L++EEI++FQ LL  L+   V    D R WS+E+ G +
Subjt:  NLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRIA-FPNASVMDLWDGETISWSISFRRLLKEEEISDFQQLLVCLNDAIVSEFSDSRIWSLENSGLY

Query:  SVKSLFNFLAASSSINKEMFKAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICPLCLNASESLQHLFFDCVYSHQCWGKLLSIFKLQWA
        S KSL   L  +S ++K +F AI +S  P+RIN L+W+M+F  +N SE+LQ + P + +SPSICPLCL AS++L H+F  C  S   W ++ S+F L W 
Subjt:  SVKSLFNFLAASSSINKEMFKAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICPLCLNASESLQHLFFDCVYSHQCWGKLLSIFKLQWA

Query:  LDQSFKGNVQQLLVGPSVKPISKLLWSNGAKAVLSELWFERNQRIFHDISLPWVDRFYSARLKASSWCSLSKHFSGFSIQDICLNWEAFI
         D S   +V QLL G ++    +++W   +KA+L E+W ERNQRIFHD +    +  ++A L A++WCSL K F  +SIQDICLNW  F+
Subjt:  LDQSFKGNVQQLLVGPSVKPISKLLWSNGAKAVLSELWFERNQRIFHDISLPWVDRFYSARLKASSWCSLSKHFSGFSIQDICLNWEAFI

A5BUT3 Reverse transcriptase domain-containing protein6.5e-8838.21Show/hide
Query:  LGGYPKKVSFWQPVIDKIQKKLDRWRRFNLSRGGRLTLCNSVLSSIPLYYMSSFLMPSKVVSKVEQLIRSFLWEGSNGSKLNHLARWEQASKPLLSGGLG
        LGG PK   FW PV+++I  +LD W++  LS GGR+TL  S LS +P Y++S F MP+ V +K+E+L R FLW G    K +HL RW+   KP   GGLG
Subjt:  LGGYPKKVSFWQPVIDKIQKKLDRWRRFNLSRGGRLTLCNSVLSSIPLYYMSSFLMPSKVVSKVEQLIRSFLWEGSNGSKLNHLARWEQASKPLLSGGLG

Query:  IGGLKNRNLSLLAKWGWRYMREPDSLWCKVVKSIHGPDCYNWHTSGKAGLSLRSPWINISKVWKQFENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSL
        +G +  RNL+LL KW WRY RE  +LW +V+ SI+G     W  +     S R PW  I++V+++F  +  + +GNG RI FW D W  D P   +YP L
Subjt:  IGGLKNRNLSLLAKWGWRYMREPDSLWCKVVKSIHGPDCYNWHTSGKAGLSLRSPWINISKVWKQFENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSL

Query:  FRIAF-PNASVMD-LWDGETISWSISFRRLLKEEEISDFQQLLVCLNDAIVS-EFSDSRIWSLENSGLYSVKSLFNFLAASSSINKEM-FKAIWKSKCPK
        FR+    N S+   L       W+++FRR L + EI D + L+  L+D  +S    D+R+W L +SGL+SVKS F  L+ SS  ++    K +W S+ P 
Subjt:  FRIAF-PNASVMD-LWDGETISWSISFRRLLKEEEISDFQQLLVCLNDAIVS-EFSDSRIWSLENSGLYSVKSLFNFLAASSSINKEM-FKAIWKSKCPK

Query:  RINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICPLCLNASESLQHLFFDCVYSHQCWGKLLSIFKLQWALDQSFKGNVQQLLVGPSVKPISKLLWSNGA
        ++   VW++    +N +++LQ R P  ALSP+IC LC+   ES  HLF  C      W +L  + K+ W   +S    +     G        +LW   +
Subjt:  RINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICPLCLNASESLQHLFFDCVYSHQCWGKLLSIFKLQWALDQSFKGNVQQLLVGPSVKPISKLLWSNGA

Query:  KAVLSELWFERNQRIFHDISLPWVDRFYSARLKASSWCSLSKHFSGFSIQDICLNWEA
         A++  +W+ERN +IF D +      + S    AS W   SK F G  +  I L+W A
Subjt:  KAVLSELWFERNQRIFHDISLPWVDRFYSARLKASSWCSLSKHFSGFSIQDICLNWEA

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657501.8e-3426.57Show/hide
Query:  VIDKIQKKLDRWRRFNLSRGGRLTLCNSVLSSIPLYYMSSFLMPSKVVSKVEQLIRSFLWEGSNGSKLNHLARWEQASKPLLSGGLGIGGLKNRNLSLLA
        +++++  ++  WR   LS  GRLTL  +VLSS+P++ MS+ L+P  ++++++QL R+FLW  +   K  HL +W +   P   GGLG+   K+ N +L++
Subjt:  VIDKIQKKLDRWRRFNLSRGGRLTLCNSVLSSIPLYYMSSFLMPSKVVSKVEQLIRSFLWEGSNGSKLNHLARWEQASKPLLSGGLGIGGLKNRNLSLLA

Query:  KWGWRYMREPDSLWCKVV-KSIHGPDCYNWHTSGKAGLSLRSPWINISKVWKQ-FENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRIAFPNASVM
        K GWR ++E +SLW  V+ K  H  +  +       G S  S W +I+   +    +   +  G+G +I FW D W+   P                   
Subjt:  KWGWRYMREPDSLWCKVV-KSIHGPDCYNWHTSGKAGLSLRSPWINISKVWKQ-FENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRIAFPNASVM

Query:  DLWDGETISWSISFRRLLKEEEISDFQQLLVCLNDAIVSEFSDSRIWSLENSGLYSVKSLFNFLAASSSINKEM---FKAIWKSKCPKRINFLVWVMIFG
        DLW      W   F ++      +   +L   + D +V+   D   W     G +SV+S +  L         M   F  +WK + P+R+   +W++   
Subjt:  DLWDGETISWSISFRRLLKEEEISDFQQLLVCLNDAIVSEFSDSRIWSLENSGLYSVKSLFNFLAASSSINKEM---FKAIWKSKCPKRINFLVWVMIFG

Query:  TLNCSEVLQSRLPSHALSPSICPLCLNASESLQHLFFDCVYSHQCWGKLL
         +   E    R   H  + ++C +C    ES+ H+  DC      W +++
Subjt:  TLNCSEVLQSRLPSHALSPSICPLCLNASESLQHLFFDCVYSHQCWGKLL

Arabidopsis top hitse value%identityAlignment
AT1G45063.1 copper ion binding;electron carriers3.0e-0531.52Show/hide
Query:  PSICPLCLNASESLQHLFFDCVYSHQCWGKLLSIFKLQWALDQSFKGNVQQLLVGPSVKPISKLLWSNGAKAVLSELWFERNQRIFHDISLP
        PS+C LC    E+ QH+FFDC +SH+ W    S  ++     + FK + + L      K ++ +L     +A +  +W ERN R+  + S P
Subjt:  PSICPLCLNASESLQHLFFDCVYSHQCWGKLLSIFKLQWALDQSFKGNVQQLLVGPSVKPISKLLWSNGAKAVLSELWFERNQRIFHDISLP

AT1G60720.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.8e-0623.53Show/hide
Query:  ENLASFKLGNGSRIAFWLDSWIEDLPF---CSKYPSLFRIAFPNASVMDLWDGETISWSISFRRLLKEEEISDFQQLLVCLNDAIVSEFSDSRIWSLENS
        E      LGNG    FW DSW    P       Y S       NA V++        W +   R    + I D    +   + A + +  D  +  +   
Subjt:  ENLASFKLGNGSRIAFWLDSWIEDLPF---CSKYPSLFRIAFPNASVMDLWDGETISWSISFRRLLKEEEISDFQQLLVCLNDAIVSEFSDSRIWSLENS

Query:  GLYSVKSLFNFLAASSSINKEMFKAIW-KSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICPLCLNASESLQHLFFDCVYSHQCWGKLLSIFK
        G  S ++       +  +  +  KA+W K   PK   F +W+     L   + L S    H  S   C LC   +ES  HL F C ++ Q W    S   
Subjt:  GLYSVKSLFNFLAASSSINKEMFKAIW-KSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICPLCLNASESLQHLFFDCVYSHQCWGKLLSIFK

Query:  LQWALDQSFKGNVQQLLVGPSVKPISKLLWSNGAKAVLSELWFERNQRIFHDISL
         +  L  S+   +  +    S  P   LL    A A++  +W +RN  + +++ +
Subjt:  LQWALDQSFKGNVQQLLVGPSVKPISKLLWSNGAKAVLSELWFERNQRIFHDISL

AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.2e-1923.86Show/hide
Query:  SFWQPVIDKIQKKLDRWRRFNLSRGGRLTLCNSVLSSIPLYYMSSFLMPSKVVSKVEQLIRSFLWEGSNGSKLNHLARWEQASKPLLSGGLGIGGLKNRN
        S + P+++KI+ ++ +W   +LS  GRL L +SV+ S+  ++MS+F +PS  + +++ +  SFLW G   +       W     P   GGLGI  LK  N
Subjt:  SFWQPVIDKIQKKLDRWRRFNLSRGGRLTLCNSVLSSIPLYYMSSFLMPSKVVSKVEQLIRSFLWEGSNGSKLNHLARWEQASKPLLSGGLGIGGLKNRN

Query:  LSLLAKWGWRYMREPDSLWCKVVKSIHGPDCYNWHTSGKAGLSLRSPWINISKVWKQFENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRIAFPNA
                                         W  SG   L     W  I K            + NGS  +FW D+W       SK   L  +   + 
Subjt:  LSLLAKWGWRYMREPDSLWCKVVKSIHGPDCYNWHTSGKAGLSLRSPWINISKVWKQFENLASFKLGNGSRIAFWLDSWIEDLPFCSKYPSLFRIAFPNA

Query:  SVMDLWDGETISWSISFRRLLKEEEISDFQQLLVCLNDAIVSEFSDSRIWSLENSGLYS-----VKSLFN-----FLAASSSINKEMFKAIWKSKCPKRI
          +D+  G T+  S++   ++           L+ + D +++E     + S E++  +       K  FN            +    +K +W S    + 
Subjt:  SVMDLWDGETISWSISFRRLLKEEEISDFQQLLVCLNDAIVSEFSDSRIWSLENSGLYS-----VKSLFN-----FLAASSSINKEMFKAIWKSKCPKRI

Query:  NFLVWVMIFGTLNCSEVLQSRLPSHALSPSICPLCLNASESLQHLFFDCVYS
        + L W+ I   L   + +   L  +A + S C LC +  E+  HLFF C YS
Subjt:  NFLVWVMIFGTLNCSEVLQSRLPSHALSPSICPLCLNASESLQHLFFDCVYS

AT4G04650.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein8.6e-0825.59Show/hide
Query:  KLGNGSRIAFWLDSWIEDLPFCSKYPSL--FRIAFP-NASVMDLWDGETISWSISFRRLLKEEEISDFQQLLVCLNDAIVSEFSDSRIWSLENSGLYSVK
        ++G+G    FW D+WI   P       L    +  P +A V D   G   SW I+  R  +   I   + LL      +  +  DS +W  +   L++  
Subjt:  KLGNGSRIAFWLDSWIEDLPFCSKYPSL--FRIAFP-NASVMDLWDGETISWSISFRRLLKEEEISDFQQLLVCLNDAIVSEFSDSRIWSLENSGLYSVK

Query:  SLFNFLAASSSINKE-----MFKAIW-KSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALS-PSICPLCLNASESLQHLFFDCVYSHQCWGKLLSIFK
        + F+     S+++ +       KA+W K+  PK   F+ WV+ +  L+     + RL +  LS P+ C LC    +S  HLFF+C +S   W    +   
Subjt:  SLFNFLAASSSINKE-----MFKAIW-KSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALS-PSICPLCLNASESLQHLFFDCVYSHQCWGKLLSIFK

Query:  LQWALDQSFKGNVQQLLVGPSVKPISKLLWSNGAKAVLSELWFERNQRIFHDIS
        L      +   +    L+ PS +    L+      + +  +W ERNQR+   +S
Subjt:  LQWALDQSFKGNVQQLLVGPSVKPISKLLWSNGAKAVLSELWFERNQRIFHDIS

AT5G18880.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.0e-0525.2Show/hide
Query:  LGNGSRIAFWLDSWIEDLPFCSKYPSLFRIAFPNASVMDLWDGETISWSISFRRLLKEEEISDFQQLLVCLNDAIV---SEFSDSRIW-SLENSGLYSVK
        +GNG   +FW D+W +      +  +    A P   +    D   +  S +    L      + Q  L  L  A V   S   DS +W +   S L S  
Subjt:  LGNGSRIAFWLDSWIEDLPFCSKYPSLFRIAFPNASVMDLWDGETISWSISFRRLLKEEEISDFQQLLVCLNDAIV---SEFSDSRIW-SLENSGLYSVK

Query:  SLFNF-LAASSSINKEMFKAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALS-PSICPLCLNASESLQHLFFDCVYSHQCWGKLLSIFKLQWAL
        S   +      S      K +W  +   R + + W+     L      + RL    ++ PS   LC N  E+  HLFF+C +S   W    S F+     
Subjt:  SLFNF-LAASSSINKEMFKAIWKSKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALS-PSICPLCLNASESLQHLFFDCVYSHQCWGKLLSIFKLQWAL

Query:  DQSFKGN-VQQLLVGPSVKPISKLLWSNGAKAVLSELWFERNQRIFHDIS
              + + QL +      I KLL     ++ +  +W ERN RIF  IS
Subjt:  DQSFKGN-VQQLLVGPSVKPISKLLWSNGAKAVLSELWFERNQRIFHDIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGAGTTCATATTTCCATTCTTCAATTTGCAGATGATACTCTTTTATTTTGCAAGTATGATGATGCTATGCTTGATTCTCTCATTTCTACCATTGGTCTTCTTGA
ATGGTGGTTAGGTGGTTATCCGAAAAAGGTGTCATTTTGGCAGCCAGTGATTGATAAAATTCAGAAAAAGCTTGATAGATGGAGGCGTTTCAATCTATCTAGAGGTGGCC
GATTGACTTTATGCAATTCAGTTTTATCAAGCATTCCGTTATATTATATGTCCTCGTTTCTCATGCCTTCTAAAGTTGTTTCAAAAGTGGAGCAGTTAATTAGATCGTTT
TTATGGGAAGGAAGTAATGGTTCCAAGTTAAATCACTTGGCTCGTTGGGAGCAAGCTTCAAAGCCTCTTTTGAGTGGAGGTCTCGGTATTGGTGGCTTGAAAAACAGAAA
CCTGTCTCTTCTTGCTAAATGGGGGTGGCGATATATGCGAGAGCCTGATTCTTTATGGTGCAAAGTTGTTAAAAGCATTCACGGGCCGGATTGTTATAATTGGCACACTT
CTGGTAAGGCCGGCCTGAGCCTTCGAAGTCCTTGGATTAATATTTCTAAGGTATGGAAGCAATTTGAGAATTTAGCTTCATTTAAACTTGGTAATGGTTCTAGAATTGCC
TTCTGGCTCGATTCTTGGATTGAAGATCTTCCTTTTTGTTCAAAGTATCCTAGTTTATTTCGGATTGCTTTTCCTAATGCCTCCGTTATGGATCTTTGGGATGGGGAGAC
TATTTCATGGTCCATTTCATTTCGTCGGCTTCTCAAAGAGGAAGAAATTTCTGATTTTCAGCAGTTGTTGGTGTGTTTAAATGATGCCATTGTATCTGAGTTTTCAGATT
CTCGCATTTGGTCTCTTGAGAATTCGGGACTTTATTCGGTTAAGTCCCTTTTTAACTTCTTGGCAGCCTCCTCTTCGATTAACAAGGAAATGTTTAAAGCTATTTGGAAA
TCTAAATGCCCTAAGAGAATTAATTTTCTTGTTTGGGTTATGATTTTTGGGACTCTAAATTGTTCAGAAGTTCTTCAAAGTAGGCTTCCTTCTCATGCATTATCTCCTTC
TATTTGCCCTTTATGTTTGAATGCCAGTGAATCTTTGCAGCATTTGTTCTTCGATTGTGTTTATTCCCATCAGTGTTGGGGAAAGCTATTGTCTATCTTCAAGCTTCAAT
GGGCTTTGGATCAATCATTCAAAGGAAATGTGCAGCAGCTTTTAGTTGGTCCTTCAGTTAAGCCGATATCTAAATTGCTTTGGTCTAATGGGGCCAAAGCCGTTTTATCA
GAACTTTGGTTTGAAAGAAATCAGAGAATTTTTCATGATATTTCTCTTCCTTGGGTGGATCGTTTTTACTCTGCTCGGCTCAAAGCTTCGTCTTGGTGTTCTTTGTCCAA
GCATTTTTCAGGATTCTCCATTCAAGATATTTGCCTCAACTGGGAAGCTTTTATTTTTCCATCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATAGAGTTCATATTTCCATTCTTCAATTTGCAGATGATACTCTTTTATTTTGCAAGTATGATGATGCTATGCTTGATTCTCTCATTTCTACCATTGGTCTTCTTGA
ATGGTGGTTAGGTGGTTATCCGAAAAAGGTGTCATTTTGGCAGCCAGTGATTGATAAAATTCAGAAAAAGCTTGATAGATGGAGGCGTTTCAATCTATCTAGAGGTGGCC
GATTGACTTTATGCAATTCAGTTTTATCAAGCATTCCGTTATATTATATGTCCTCGTTTCTCATGCCTTCTAAAGTTGTTTCAAAAGTGGAGCAGTTAATTAGATCGTTT
TTATGGGAAGGAAGTAATGGTTCCAAGTTAAATCACTTGGCTCGTTGGGAGCAAGCTTCAAAGCCTCTTTTGAGTGGAGGTCTCGGTATTGGTGGCTTGAAAAACAGAAA
CCTGTCTCTTCTTGCTAAATGGGGGTGGCGATATATGCGAGAGCCTGATTCTTTATGGTGCAAAGTTGTTAAAAGCATTCACGGGCCGGATTGTTATAATTGGCACACTT
CTGGTAAGGCCGGCCTGAGCCTTCGAAGTCCTTGGATTAATATTTCTAAGGTATGGAAGCAATTTGAGAATTTAGCTTCATTTAAACTTGGTAATGGTTCTAGAATTGCC
TTCTGGCTCGATTCTTGGATTGAAGATCTTCCTTTTTGTTCAAAGTATCCTAGTTTATTTCGGATTGCTTTTCCTAATGCCTCCGTTATGGATCTTTGGGATGGGGAGAC
TATTTCATGGTCCATTTCATTTCGTCGGCTTCTCAAAGAGGAAGAAATTTCTGATTTTCAGCAGTTGTTGGTGTGTTTAAATGATGCCATTGTATCTGAGTTTTCAGATT
CTCGCATTTGGTCTCTTGAGAATTCGGGACTTTATTCGGTTAAGTCCCTTTTTAACTTCTTGGCAGCCTCCTCTTCGATTAACAAGGAAATGTTTAAAGCTATTTGGAAA
TCTAAATGCCCTAAGAGAATTAATTTTCTTGTTTGGGTTATGATTTTTGGGACTCTAAATTGTTCAGAAGTTCTTCAAAGTAGGCTTCCTTCTCATGCATTATCTCCTTC
TATTTGCCCTTTATGTTTGAATGCCAGTGAATCTTTGCAGCATTTGTTCTTCGATTGTGTTTATTCCCATCAGTGTTGGGGAAAGCTATTGTCTATCTTCAAGCTTCAAT
GGGCTTTGGATCAATCATTCAAAGGAAATGTGCAGCAGCTTTTAGTTGGTCCTTCAGTTAAGCCGATATCTAAATTGCTTTGGTCTAATGGGGCCAAAGCCGTTTTATCA
GAACTTTGGTTTGAAAGAAATCAGAGAATTTTTCATGATATTTCTCTTCCTTGGGTGGATCGTTTTTACTCTGCTCGGCTCAAAGCTTCGTCTTGGTGTTCTTTGTCCAA
GCATTTTTCAGGATTCTCCATTCAAGATATTTGCCTCAACTGGGAAGCTTTTATTTTTCCATCTTAG
Protein sequenceShow/hide protein sequence
MDRVHISILQFADDTLLFCKYDDAMLDSLISTIGLLEWWLGGYPKKVSFWQPVIDKIQKKLDRWRRFNLSRGGRLTLCNSVLSSIPLYYMSSFLMPSKVVSKVEQLIRSF
LWEGSNGSKLNHLARWEQASKPLLSGGLGIGGLKNRNLSLLAKWGWRYMREPDSLWCKVVKSIHGPDCYNWHTSGKAGLSLRSPWINISKVWKQFENLASFKLGNGSRIA
FWLDSWIEDLPFCSKYPSLFRIAFPNASVMDLWDGETISWSISFRRLLKEEEISDFQQLLVCLNDAIVSEFSDSRIWSLENSGLYSVKSLFNFLAASSSINKEMFKAIWK
SKCPKRINFLVWVMIFGTLNCSEVLQSRLPSHALSPSICPLCLNASESLQHLFFDCVYSHQCWGKLLSIFKLQWALDQSFKGNVQQLLVGPSVKPISKLLWSNGAKAVLS
ELWFERNQRIFHDISLPWVDRFYSARLKASSWCSLSKHFSGFSIQDICLNWEAFIFPS