; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0030923 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0030923
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationchr11:2875038..2875616
RNA-Seq ExpressionLag0030923
SyntenyLag0030923
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0007275 - multicellular organism development (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR013010 - Zinc finger, SIAH-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR018121 - Seven-in-absentia protein, TRAF-like domain
IPR044286 - E3 ubiquitin-protein ligase SINA-like, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140738.2 E3 ubiquitin-protein ligase SINA-like 10 [Cucumis sativus]7.3e-5860.85Show/hide
Query:  MRCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHKNLAQSFSYYSKFTTCFNIDDTYCILQEEDD
        +RCR IEK+LESIK+ C N+ YGCK  +  N I +HESLC YEPCSCPL NC+FVGS+ QL LHF+KKHK+ A+ FSY ++FT C N  DT+ IL+ E+D
Subjt:  MRCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHKNLAQSFSYYSKFTTCFNIDDTYCILQEEDD

Query:  GRLFLLFFTYEPFGNAATVSRIGPSSSKKKFYYEIKVKDQERVLRSQSMAKEIQAWVRVPPPSNGSLLIPNGFFESSSQMTLQLCIWPA
        G LF L +T+E FGNA T++RIGP SS+KKF YEIK K    VL  QS+AKEIQ  ++V PPS GSLLIPN +F SS+Q  L++ IWPA
Subjt:  GRLFLLFFTYEPFGNAATVSRIGPSSSKKKFYYEIKVKDQERVLRSQSMAKEIQAWVRVPPPSNGSLLIPNGFFESSSQMTLQLCIWPA

XP_022143325.1 E3 ubiquitin-protein ligase SINA-like 10 [Momordica charantia]2.0e-6065.08Show/hide
Query:  MRCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHKNLAQSFSYYSKFTTCFNIDDTYCILQEEDD
        +RCR IEK+LESIK+ C NS YGCK T+  N+  +H SLCTYEPCSCP+ +C FVGSS +L  HFSKKHKN A+SFSY S+FT C N  D+Y ILQ E D
Subjt:  MRCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHKNLAQSFSYYSKFTTCFNIDDTYCILQEEDD

Query:  GRLFLLFFTYEPFGNAATVSRIGPSSSKKKFYYEIKVKDQERVLRSQSMAKEIQAWVRVPPPSNGSLLIPNGFFESSSQMTLQLCIWPA
        G LF L FT+E FGNA TVSRIGPSSS+KKF YEIK K Q  +L  QS+AKEIQ  V V PPSN SLLIPN FF SS+Q  L+  IWP+
Subjt:  GRLFLLFFTYEPFGNAATVSRIGPSSSKKKFYYEIKVKDQERVLRSQSMAKEIQAWVRVPPPSNGSLLIPNGFFESSSQMTLQLCIWPA

XP_022143326.1 putative E3 ubiquitin-protein ligase SINA-like 6 isoform X1 [Momordica charantia]3.8e-6769.68Show/hide
Query:  MRCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHKNLAQSFSYYSKFTTCFNIDDTY-CILQEED
        M CRPIEKLLES+K HC NS YGCK  +YWNKI +HESLC YEPCSCPL NCSFVGSSGQ+  HF+KKHK+ A SFSY SKFT CFN  +TY  ILQE+ 
Subjt:  MRCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHKNLAQSFSYYSKFTTCFNIDDTY-CILQEED

Query:  DGRLFLLFFTYEPFGNAATVSRIGPSSSKKKFYYEIKVKDQERVLRSQSMAKEIQAWVRVPPPSNGSLLIPNGFFESSSQMTLQLCIW
        D  L+LL +T EPFGNAATVSRIG S S +KF+YEIK K +ERVL  QS+AKEI+A V V  PSNGSLLIP  FFESSS+ TL++ IW
Subjt:  DGRLFLLFFTYEPFGNAATVSRIGPSSSKKKFYYEIKVKDQERVLRSQSMAKEIQAWVRVPPPSNGSLLIPNGFFESSSQMTLQLCIW

XP_022143327.1 E3 ubiquitin-protein ligase SINA-like 10 isoform X2 [Momordica charantia]1.2e-7169.79Show/hide
Query:  MRCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHKNLAQSFSYYSKFTTCFNIDDTYCILQEEDD
        MRCRPIEKLLESIK+ C NSTYGCK+ +YWNKI +H+S C YEPCSCP  +CSFVGSSG L+ HF KKHKN A SFSY SKFT CFN  +TY IL+EE D
Subjt:  MRCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHKNLAQSFSYYSKFTTCFNIDDTYCILQEEDD

Query:  GRLFLLFFTYEPFGNAATVSRIGPSSSKKKFYYEIKVKDQERVLRSQSMAKEIQAWVRVPPPSNGSLLIPNGFFESSSQMTLQLCIWPAGER
        G L++L +T EPFGN ATVSRIG S SK+KF+YEIK + +E VLRSQS+AKEIQA V VPPPS GSLLIP  FF+SSS  TL+L IWPA  +
Subjt:  GRLFLLFFTYEPFGNAATVSRIGPSSSKKKFYYEIKVKDQERVLRSQSMAKEIQAWVRVPPPSNGSLLIPNGFFESSSQMTLQLCIWPAGER

XP_022143328.1 E3 ubiquitin-protein ligase SINA-like 10 isoform X3 [Momordica charantia]1.2e-7169.79Show/hide
Query:  MRCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHKNLAQSFSYYSKFTTCFNIDDTYCILQEEDD
        MRCRPIEKLLESIK+ C NSTYGCK+ +YWNKI +H+S C YEPCSCP  +CSFVGSSG L+ HF KKHKN A SFSY SKFT CFN  +TY IL+EE D
Subjt:  MRCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHKNLAQSFSYYSKFTTCFNIDDTYCILQEEDD

Query:  GRLFLLFFTYEPFGNAATVSRIGPSSSKKKFYYEIKVKDQERVLRSQSMAKEIQAWVRVPPPSNGSLLIPNGFFESSSQMTLQLCIWPAGER
        G L++L +T EPFGN ATVSRIG S SK+KF+YEIK + +E VLRSQS+AKEIQA V VPPPS GSLLIP  FF+SSS  TL+L IWPA  +
Subjt:  GRLFLLFFTYEPFGNAATVSRIGPSSSKKKFYYEIKVKDQERVLRSQSMAKEIQAWVRVPPPSNGSLLIPNGFFESSSQMTLQLCIWPAGER

TrEMBL top hitse value%identityAlignment
A0A0A0L9Z6 RING-type E3 ubiquitin transferase3.5e-5860.85Show/hide
Query:  MRCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHKNLAQSFSYYSKFTTCFNIDDTYCILQEEDD
        +RCR IEK+LESIK+ C N+ YGCK  +  N I +HESLC YEPCSCPL NC+FVGS+ QL LHF+KKHK+ A+ FSY ++FT C N  DT+ IL+ E+D
Subjt:  MRCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHKNLAQSFSYYSKFTTCFNIDDTYCILQEEDD

Query:  GRLFLLFFTYEPFGNAATVSRIGPSSSKKKFYYEIKVKDQERVLRSQSMAKEIQAWVRVPPPSNGSLLIPNGFFESSSQMTLQLCIWPA
        G LF L +T+E FGNA T++RIGP SS+KKF YEIK K    VL  QS+AKEIQ  ++V PPS GSLLIPN +F SS+Q  L++ IWPA
Subjt:  GRLFLLFFTYEPFGNAATVSRIGPSSSKKKFYYEIKVKDQERVLRSQSMAKEIQAWVRVPPPSNGSLLIPNGFFESSSQMTLQLCIWPA

A0A6J1CNI1 RING-type E3 ubiquitin transferase9.9e-6165.08Show/hide
Query:  MRCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHKNLAQSFSYYSKFTTCFNIDDTYCILQEEDD
        +RCR IEK+LESIK+ C NS YGCK T+  N+  +H SLCTYEPCSCP+ +C FVGSS +L  HFSKKHKN A+SFSY S+FT C N  D+Y ILQ E D
Subjt:  MRCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHKNLAQSFSYYSKFTTCFNIDDTYCILQEEDD

Query:  GRLFLLFFTYEPFGNAATVSRIGPSSSKKKFYYEIKVKDQERVLRSQSMAKEIQAWVRVPPPSNGSLLIPNGFFESSSQMTLQLCIWPA
        G LF L FT+E FGNA TVSRIGPSSS+KKF YEIK K Q  +L  QS+AKEIQ  V V PPSN SLLIPN FF SS+Q  L+  IWP+
Subjt:  GRLFLLFFTYEPFGNAATVSRIGPSSSKKKFYYEIKVKDQERVLRSQSMAKEIQAWVRVPPPSNGSLLIPNGFFESSSQMTLQLCIWPA

A0A6J1CPY7 RING-type E3 ubiquitin transferase1.9e-6769.68Show/hide
Query:  MRCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHKNLAQSFSYYSKFTTCFNIDDTY-CILQEED
        M CRPIEKLLES+K HC NS YGCK  +YWNKI +HESLC YEPCSCPL NCSFVGSSGQ+  HF+KKHK+ A SFSY SKFT CFN  +TY  ILQE+ 
Subjt:  MRCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHKNLAQSFSYYSKFTTCFNIDDTY-CILQEED

Query:  DGRLFLLFFTYEPFGNAATVSRIGPSSSKKKFYYEIKVKDQERVLRSQSMAKEIQAWVRVPPPSNGSLLIPNGFFESSSQMTLQLCIW
        D  L+LL +T EPFGNAATVSRIG S S +KF+YEIK K +ERVL  QS+AKEI+A V V  PSNGSLLIP  FFESSS+ TL++ IW
Subjt:  DGRLFLLFFTYEPFGNAATVSRIGPSSSKKKFYYEIKVKDQERVLRSQSMAKEIQAWVRVPPPSNGSLLIPNGFFESSSQMTLQLCIW

A0A6J1CQF8 RING-type E3 ubiquitin transferase5.6e-7269.79Show/hide
Query:  MRCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHKNLAQSFSYYSKFTTCFNIDDTYCILQEEDD
        MRCRPIEKLLESIK+ C NSTYGCK+ +YWNKI +H+S C YEPCSCP  +CSFVGSSG L+ HF KKHKN A SFSY SKFT CFN  +TY IL+EE D
Subjt:  MRCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHKNLAQSFSYYSKFTTCFNIDDTYCILQEEDD

Query:  GRLFLLFFTYEPFGNAATVSRIGPSSSKKKFYYEIKVKDQERVLRSQSMAKEIQAWVRVPPPSNGSLLIPNGFFESSSQMTLQLCIWPAGER
        G L++L +T EPFGN ATVSRIG S SK+KF+YEIK + +E VLRSQS+AKEIQA V VPPPS GSLLIP  FF+SSS  TL+L IWPA  +
Subjt:  GRLFLLFFTYEPFGNAATVSRIGPSSSKKKFYYEIKVKDQERVLRSQSMAKEIQAWVRVPPPSNGSLLIPNGFFESSSQMTLQLCIWPAGER

A0A6J1CQH1 RING-type E3 ubiquitin transferase5.6e-7269.79Show/hide
Query:  MRCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHKNLAQSFSYYSKFTTCFNIDDTYCILQEEDD
        MRCRPIEKLLESIK+ C NSTYGCK+ +YWNKI +H+S C YEPCSCP  +CSFVGSSG L+ HF KKHKN A SFSY SKFT CFN  +TY IL+EE D
Subjt:  MRCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHKNLAQSFSYYSKFTTCFNIDDTYCILQEEDD

Query:  GRLFLLFFTYEPFGNAATVSRIGPSSSKKKFYYEIKVKDQERVLRSQSMAKEIQAWVRVPPPSNGSLLIPNGFFESSSQMTLQLCIWPAGER
        G L++L +T EPFGN ATVSRIG S SK+KF+YEIK + +E VLRSQS+AKEIQA V VPPPS GSLLIP  FF+SSS  TL+L IWPA  +
Subjt:  GRLFLLFFTYEPFGNAATVSRIGPSSSKKKFYYEIKVKDQERVLRSQSMAKEIQAWVRVPPPSNGSLLIPNGFFESSSQMTLQLCIWPAGER

SwissProt top hitse value%identityAlignment
Q84K34 E3 ubiquitin-protein ligase SINA-like 102.5e-2130.48Show/hide
Query:  MRCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHKNLAQSFSYYSKFTTCFNIDDTYCILQEEDD
        +RCR +EK++E+ +V C N+ YGCK +  +    +HE +C + PCSCP+L+C + G    L+ H   +HK+   SF + ++ T   +++    ILQEE+D
Subjt:  MRCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHKNLAQSFSYYSKFTTCFNIDDTYCILQEEDD

Query:  GRLFLLFFTYEPFGNAATVSRIGP-SSSKKKFYYEIKVKDQERVLRSQSMAKEIQAWVRVPPPSNGSLLIPNGFFESSSQMTLQLCI
        G + ++           +VS I P +    +    +     + +L+   M K IQ  V    P +G +LIP+  F  +  + LQ+ I
Subjt:  GRLFLLFFTYEPFGNAATVSRIGP-SSSKKKFYYEIKVKDQERVLRSQSMAKEIQAWVRVPPPSNGSLLIPNGFFESSSQMTLQLCI

Q9C9M0 E3 ubiquitin-protein ligase SINA-like 42.9e-1731.44Show/hide
Query:  MRCRPIEKLLESIKVHCPNSTYGCKR-TVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHK-NLAQSFSYYSKFTTCFNID----DTYCI
        +RCR +EK++++  V C N+ YGCK+ T Y N++++HE +C + PCSCP+ +C+++G    L  HF   HK +     S+       F +D    D   I
Subjt:  MRCRPIEKLLESIKVHCPNSTYGCKR-TVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHK-NLAQSFSYYSKFTTCFNID----DTYCI

Query:  LQEEDDGRLFLLFFTYEPFGNAATVSRIGPSSSK-KKFYYEIKVKDQERVLRSQSMAKEIQAW-VRVPPPSNGSLLIPNGFFESSSQMTLQLCI
          EE  G LF++       G  ATVS I P   + +KF   +        LR     K IQ    +   P    LLIP+ +  +   M +++ I
Subjt:  LQEEDDGRLFLLFFTYEPFGNAATVSRIGPSSSK-KKFYYEIKVKDQERVLRSQSMAKEIQAW-VRVPPPSNGSLLIPNGFFESSSQMTLQLCI

Q9FKD7 E3 ubiquitin-protein ligase SINA-like 71.9e-1631.21Show/hide
Query:  RCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHKNLAQ--SFSYYSKFTTCFNIDDTYCILQEED
        RCR +E +LESI + CPN+  GCK+ V + K   HE  C +  C+CP L+C++  S   L  H+   H  + Q  +F      +   NI     I  E  
Subjt:  RCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHKNLAQ--SFSYYSKFTTCFNIDDTYCILQEED

Query:  DGRLFLLFFTYEPFGNAATVSRIGPSSSK-KKFYYEIKVKDQERVLRSQSMAKEIQAWVRVPPPSNGSLLIPN
           LF +    EP+G   TVS I PSS +  ++ Y +        +  QS   +    +    P    +LIPN
Subjt:  DGRLFLLFFTYEPFGNAATVSRIGPSSSK-KKFYYEIKVKDQERVLRSQSMAKEIQAWVRVPPPSNGSLLIPN

Q9FKD9 Putative E3 ubiquitin-protein ligase SINA-like 65.0e-1730.53Show/hide
Query:  MRCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHK--NLAQSFSYYSKFTTCFNIDDTYCILQEE
        +RCR +E++LES+ V C  +  GC +T+Y+ +   HE +C + PCSCP+  C++ GS   L  H+   H   + A SF+  S       I D   I +  
Subjt:  MRCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHK--NLAQSFSYYSKFTTCFNIDDTYCILQEE

Query:  DDGRLFLLFFTYEPFGNAATVSRIGPSSSK-KKFYYEIKVKDQERV-LRSQSMAKEIQAWVRVPPPSNGSLLIPNGFFESSSQMTLQLCI
        +   LF++    EP G   +VS I PS+ +  +F Y +     E V +  QS   +    V    P +  +LIP+        + + LCI
Subjt:  DDGRLFLLFFTYEPFGNAATVSRIGPSSSK-KKFYYEIKVKDQERV-LRSQSMAKEIQAWVRVPPPSNGSLLIPNGFFESSSQMTLQLCI

Q9FM14 E3 ubiquitin-protein ligase SINA-like 111.0e-1731.03Show/hide
Query:  RCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKH---KNLAQSFSYYSKFTTCFNIDDTYCILQEE
        RC  +E++LES  V C N+ +GC ++V + K+ +HE  C Y  CSCP L C++ GS   +  HF ++H     +  S   YS      NI +   +L E 
Subjt:  RCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKH---KNLAQSFSYYSKFTTCFNIDDTYCILQEE

Query:  DDGRLFLLFFTYEPFGNAATVSRIGPSSSK-KKFYYEIKVKDQERVLRSQSMAKEIQAWVRVPPPSNGSLLIPN
            LF++    E  G   TV RI P +S+ KKF Y +        +  +S   +    V    P +  + +PN
Subjt:  DDGRLFLLFFTYEPFGNAATVSRIGPSSSK-KKFYYEIKVKDQERVLRSQSMAKEIQAWVRVPPPSNGSLLIPN

Arabidopsis top hitse value%identityAlignment
AT1G66650.1 Protein with RING/U-box and TRAF-like domains2.1e-1831.44Show/hide
Query:  MRCRPIEKLLESIKVHCPNSTYGCKR-TVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHK-NLAQSFSYYSKFTTCFNID----DTYCI
        +RCR +EK++++  V C N+ YGCK+ T Y N++++HE +C + PCSCP+ +C+++G    L  HF   HK +     S+       F +D    D   I
Subjt:  MRCRPIEKLLESIKVHCPNSTYGCKR-TVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHK-NLAQSFSYYSKFTTCFNID----DTYCI

Query:  LQEEDDGRLFLLFFTYEPFGNAATVSRIGPSSSK-KKFYYEIKVKDQERVLRSQSMAKEIQAW-VRVPPPSNGSLLIPNGFFESSSQMTLQLCI
          EE  G LF++       G  ATVS I P   + +KF   +        LR     K IQ    +   P    LLIP+ +  +   M +++ I
Subjt:  LQEEDDGRLFLLFFTYEPFGNAATVSRIGPSSSK-KKFYYEIKVKDQERVLRSQSMAKEIQAW-VRVPPPSNGSLLIPNGFFESSSQMTLQLCI

AT5G37870.1 Protein with RING/U-box and TRAF-like domains3.5e-1830.53Show/hide
Query:  MRCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHK--NLAQSFSYYSKFTTCFNIDDTYCILQEE
        +RCR +E++LES+ V C  +  GC +T+Y+ +   HE +C + PCSCP+  C++ GS   L  H+   H   + A SF+  S       I D   I +  
Subjt:  MRCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHK--NLAQSFSYYSKFTTCFNIDDTYCILQEE

Query:  DDGRLFLLFFTYEPFGNAATVSRIGPSSSK-KKFYYEIKVKDQERV-LRSQSMAKEIQAWVRVPPPSNGSLLIPNGFFESSSQMTLQLCI
        +   LF++    EP G   +VS I PS+ +  +F Y +     E V +  QS   +    V    P +  +LIP+        + + LCI
Subjt:  DDGRLFLLFFTYEPFGNAATVSRIGPSSSK-KKFYYEIKVKDQERV-LRSQSMAKEIQAWVRVPPPSNGSLLIPNGFFESSSQMTLQLCI

AT5G37890.1 Protein with RING/U-box and TRAF-like domains1.3e-1731.21Show/hide
Query:  RCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHKNLAQ--SFSYYSKFTTCFNIDDTYCILQEED
        RCR +E +LESI + CPN+  GCK+ V + K   HE  C +  C+CP L+C++  S   L  H+   H  + Q  +F      +   NI     I  E  
Subjt:  RCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHKNLAQ--SFSYYSKFTTCFNIDDTYCILQEED

Query:  DGRLFLLFFTYEPFGNAATVSRIGPSSSK-KKFYYEIKVKDQERVLRSQSMAKEIQAWVRVPPPSNGSLLIPN
           LF +    EP+G   TVS I PSS +  ++ Y +        +  QS   +    +    P    +LIPN
Subjt:  DGRLFLLFFTYEPFGNAATVSRIGPSSSK-KKFYYEIKVKDQERVLRSQSMAKEIQAWVRVPPPSNGSLLIPN

AT5G37930.1 Protein with RING/U-box and TRAF-like domains1.8e-2230.48Show/hide
Query:  MRCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHKNLAQSFSYYSKFTTCFNIDDTYCILQEEDD
        +RCR +EK++E+ +V C N+ YGCK +  +    +HE +C + PCSCP+L+C + G    L+ H   +HK+   SF + ++ T   +++    ILQEE+D
Subjt:  MRCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHKNLAQSFSYYSKFTTCFNIDDTYCILQEEDD

Query:  GRLFLLFFTYEPFGNAATVSRIGP-SSSKKKFYYEIKVKDQERVLRSQSMAKEIQAWVRVPPPSNGSLLIPNGFFESSSQMTLQLCI
        G + ++           +VS I P +    +    +     + +L+   M K IQ  V    P +G +LIP+  F  +  + LQ+ I
Subjt:  GRLFLLFFTYEPFGNAATVSRIGP-SSSKKKFYYEIKVKDQERVLRSQSMAKEIQAWVRVPPPSNGSLLIPNGFFESSSQMTLQLCI

AT5G62800.1 Protein with RING/U-box and TRAF-like domains7.1e-1931.03Show/hide
Query:  RCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKH---KNLAQSFSYYSKFTTCFNIDDTYCILQEE
        RC  +E++LES  V C N+ +GC ++V + K+ +HE  C Y  CSCP L C++ GS   +  HF ++H     +  S   YS      NI +   +L E 
Subjt:  RCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKH---KNLAQSFSYYSKFTTCFNIDDTYCILQEE

Query:  DDGRLFLLFFTYEPFGNAATVSRIGPSSSK-KKFYYEIKVKDQERVLRSQSMAKEIQAWVRVPPPSNGSLLIPN
            LF++    E  G   TV RI P +S+ KKF Y +        +  +S   +    V    P +  + +PN
Subjt:  DDGRLFLLFFTYEPFGNAATVSRIGPSSSK-KKFYYEIKVKDQERVLRSQSMAKEIQAWVRVPPPSNGSLLIPN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTTGCAGACCGATCGAAAAGCTTTTGGAATCGATCAAAGTACACTGCCCAAACTCAACTTATGGATGCAAAAGGACAGTATATTGGAACAAGATAAAGAACCACGA
GTCATTATGCACGTATGAACCATGCTCGTGCCCTTTATTGAATTGCTCATTTGTTGGTTCATCTGGGCAGTTATCCTTGCATTTCAGCAAAAAACACAAAAACTTAGCCC
AAAGCTTCTCATATTATTCCAAATTCACTACGTGCTTCAACATTGATGATACGTATTGTATTCTTCAAGAAGAGGATGATGGGCGTTTGTTCCTCCTCTTTTTTACGTAT
GAACCTTTTGGGAATGCAGCAACTGTGAGTCGAATCGGACCTTCGTCGTCGAAGAAAAAGTTTTACTATGAAATCAAAGTGAAAGATCAAGAGCGCGTTCTTCGTTCGCA
ATCAATGGCGAAGGAGATCCAAGCTTGGGTTAGAGTTCCTCCTCCTTCAAATGGATCCCTTTTGATTCCAAATGGCTTCTTTGAATCTTCATCCCAGATGACCTTGCAGT
TATGCATTTGGCCTGCAGGGGAAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCGTTGCAGACCGATCGAAAAGCTTTTGGAATCGATCAAAGTACACTGCCCAAACTCAACTTATGGATGCAAAAGGACAGTATATTGGAACAAGATAAAGAACCACGA
GTCATTATGCACGTATGAACCATGCTCGTGCCCTTTATTGAATTGCTCATTTGTTGGTTCATCTGGGCAGTTATCCTTGCATTTCAGCAAAAAACACAAAAACTTAGCCC
AAAGCTTCTCATATTATTCCAAATTCACTACGTGCTTCAACATTGATGATACGTATTGTATTCTTCAAGAAGAGGATGATGGGCGTTTGTTCCTCCTCTTTTTTACGTAT
GAACCTTTTGGGAATGCAGCAACTGTGAGTCGAATCGGACCTTCGTCGTCGAAGAAAAAGTTTTACTATGAAATCAAAGTGAAAGATCAAGAGCGCGTTCTTCGTTCGCA
ATCAATGGCGAAGGAGATCCAAGCTTGGGTTAGAGTTCCTCCTCCTTCAAATGGATCCCTTTTGATTCCAAATGGCTTCTTTGAATCTTCATCCCAGATGACCTTGCAGT
TATGCATTTGGCCTGCAGGGGAAAGATGA
Protein sequenceShow/hide protein sequence
MRCRPIEKLLESIKVHCPNSTYGCKRTVYWNKIKNHESLCTYEPCSCPLLNCSFVGSSGQLSLHFSKKHKNLAQSFSYYSKFTTCFNIDDTYCILQEEDDGRLFLLFFTY
EPFGNAATVSRIGPSSSKKKFYYEIKVKDQERVLRSQSMAKEIQAWVRVPPPSNGSLLIPNGFFESSSQMTLQLCIWPAGER