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Lag0030933 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0030933
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr11:2937263..2937607
RNA-Seq ExpressionLag0030933
SyntenyLag0030933
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CCA66153.1 hypothetical protein [Beta vulgaris subsp. vulgaris]2.7e-0750Show/hide
Query:  GGIGLQSMKDKNKAPLAKWIWRFNQEKEALWRKLIHGKYG--SSTYLHWASLAKTKGPWKAIVN
        GG+GL ++  KN A L KWIWRF  E  ALWR+++HGKYG   S      SL+   GPW  I N
Subjt:  GGIGLQSMKDKNKAPLAKWIWRFNQEKEALWRKLIHGKYG--SSTYLHWASLAKTKGPWKAIVN

GEY44492.1 RNA-directed DNA polymerase, eukaryota, reverse transcriptase zinc-binding domain protein [Tanacetum cinerariifolium]1.2e-0740.21Show/hide
Query:  GGIGLQSMKDKNKAPLAKWIWRFNQEKEALWRKLIHGKYGS-STYLHWASLAKTKGPWKAIVNIKSSLQVEFVTKL--GMENLLVFGLTLGYQTPHW
        GG+G+ S++ KN + L KW+WRF  E   LWRK+I   YG    ++H A      GPW  IV  KS+   E++ KL   ++NL+V  +  G QT  W
Subjt:  GGIGLQSMKDKNKAPLAKWIWRFNQEKEALWRKLIHGKYGS-STYLHWASLAKTKGPWKAIVNIKSSLQVEFVTKL--GMENLLVFGLTLGYQTPHW

GEZ09909.1 putative RNA-directed DNA polymerase, eukaryota, reverse transcriptase zinc-binding domain protein [Tanacetum cinerariifolium]2.8e-0936.94Show/hide
Query:  MKKGGIGLQSMKDKNKAPLAKWIWRFNQEKEALWRKLIHGKYGSSTYLHWAS-LAKTKGPWKAIVNIKS-----SLQVEFVTKLGMENLLVFGLTLGYQT
        + +GG+G+ S+K  N++ LAKW WRF  E+ ALWRK+I   +G+   LH  S +A   GPW  ++N+K      S  +  V K  +EN    G T  + T
Subjt:  MKKGGIGLQSMKDKNKAPLAKWIWRFNQEKEALWRKLIHGKYGSSTYLHWAS-LAKTKGPWKAIVNIKS-----SLQVEFVTKLGMENLLVFGLTLGYQT

Query:  PHWPINFPFCT
          W    P C+
Subjt:  PHWPINFPFCT

GFA45486.1 reverse transcriptase domain, reverse transcriptase zinc-binding domain protein [Tanacetum cinerariifolium]2.8e-0937.84Show/hide
Query:  MKKGGIGLQSMKDKNKAPLAKWIWRFNQEKEALWRKLIHGKYGSSTYLHWAS-LAKTKGPWKAIVNIKS-----SLQVEFVTKLGMENLLVFGLTLGYQT
        + KGG+G+ S+K  N + LAKW WRF  E+ ALWRK I   +G+   LH  S +A   GPW  ++N+K      S  +  V K  +EN    G T  + T
Subjt:  MKKGGIGLQSMKDKNKAPLAKWIWRFNQEKEALWRKLIHGKYGSSTYLHWAS-LAKTKGPWKAIVNIKS-----SLQVEFVTKLGMENLLVFGLTLGYQT

Query:  PHWPINFPFCT
          W    P C+
Subjt:  PHWPINFPFCT

XP_022027924.1 uncharacterized protein LOC110929112 isoform X1 [Helianthus annuus]2.7e-0735.34Show/hide
Query:  GGIGLQSMKDKNKAPLAKWIWRFNQEKEALWRKLIHGKYGSSTYLHWASL---AKTKGPWKAIVNIKSS-LQVEFVTKLGMENLLVFGLTLGYQTPHWPI
        GG+G  S+KD N A LAKW WRF  EK  LWRK+I   + +S    W+++       GPWK IV+I  + L+V    K  +   +  G    +    W  
Subjt:  GGIGLQSMKDKNKAPLAKWIWRFNQEKEALWRKLIHGKYGSSTYLHWASL---AKTKGPWKAIVNIKSS-LQVEFVTKLGMENLLVFGLTLGYQTPHWPI

Query:  NFP--------FCTDC
         FP        FC +C
Subjt:  NFP--------FCTDC

TrEMBL top hitse value%identityAlignment
A0A438EJF7 LINE-1 retrotransposable element ORF2 protein4.9e-0736.56Show/hide
Query:  KKGGIGLQSMKDKNKAPLAKWIWRFNQEKEALWRKLIHGKYGSSTYLHWASLAKTK---GPWKAIVNIKSSLQVEFVTKLGMENLLVFGLTLG
        +KGG+G++ +   NKA + KWIWRF  EK+ LW+K+I  KYG   +  W + A+     G WK I+   +      + K+G    + FGL  G
Subjt:  KKGGIGLQSMKDKNKAPLAKWIWRFNQEKEALWRKLIHGKYGSSTYLHWASLAKTK---GPWKAIVNIKSSLQVEFVTKLGMENLLVFGLTLG

A0A5D2P022 Uncharacterized protein3.7e-0762.5Show/hide
Query:  KGGIGLQSMKDKNKAPLAKWIWRFNQEKEALWRKLIHGKYGSSTYLHW
        KGG+G+  +K KNK+ LAKW WRF  E+EALWRK+I  KYG ST L W
Subjt:  KGGIGLQSMKDKNKAPLAKWIWRFNQEKEALWRKLIHGKYGSSTYLHW

A0A699JNQ0 Reverse transcriptase domain, reverse transcriptase zinc-binding domain protein (Fragment)1.4e-0937.84Show/hide
Query:  MKKGGIGLQSMKDKNKAPLAKWIWRFNQEKEALWRKLIHGKYGSSTYLHWAS-LAKTKGPWKAIVNIKS-----SLQVEFVTKLGMENLLVFGLTLGYQT
        + KGG+G+ S+K  N + LAKW WRF  E+ ALWRK I   +G+   LH  S +A   GPW  ++N+K      S  +  V K  +EN    G T  + T
Subjt:  MKKGGIGLQSMKDKNKAPLAKWIWRFNQEKEALWRKLIHGKYGSSTYLHWAS-LAKTKGPWKAIVNIKS-----SLQVEFVTKLGMENLLVFGLTLGYQT

Query:  PHWPINFPFCT
          W    P C+
Subjt:  PHWPINFPFCT

A0A7C9EGN3 Reverse transcriptase domain-containing protein (Fragment)2.9e-0746.15Show/hide
Query:  KGGIGLQSMKDKNKAPLAKWIWRFNQEKEALWRKLIHGKYGSSTYLHWA---SLAKTKGPWKAIV
        +GG+G++ ++D N+A  +KW+WRF QE+EALWRK+I  KYG      W+   S A   G WK+I+
Subjt:  KGGIGLQSMKDKNKAPLAKWIWRFNQEKEALWRKLIHGKYGSSTYLHWA---SLAKTKGPWKAIV

F4NCK1 Reverse transcriptase domain-containing protein1.3e-0750Show/hide
Query:  GGIGLQSMKDKNKAPLAKWIWRFNQEKEALWRKLIHGKYG--SSTYLHWASLAKTKGPWKAIVN
        GG+GL ++  KN A L KWIWRF  E  ALWR+++HGKYG   S      SL+   GPW  I N
Subjt:  GGIGLQSMKDKNKAPLAKWIWRFNQEKEALWRKLIHGKYG--SSTYLHWASLAKTKGPWKAIVN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAAAGGTGGCATCGGATTGCAATCCATGAAAGATAAAAATAAGGCACCCCTTGCTAAATGGATTTGGAGATTCAACCAAGAGAAGGAAGCATTATGGCGAAAACT
TATTCATGGTAAATATGGATCCTCCACTTATTTACATTGGGCATCTCTTGCTAAAACCAAAGGCCCATGGAAAGCCATTGTAAACATCAAGAGCTCATTACAAGTAGAAT
TTGTCACCAAGTTGGGAATGGAGAATCTACTCGTTTTTGGTTTGACCCTTGGGTATCAAACCCCCCATTGGCCAATCAATTTCCCCTTTTGCACAGATTGTCTCGGTGTA
AAGATGCCATGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAAAGGTGGCATCGGATTGCAATCCATGAAAGATAAAAATAAGGCACCCCTTGCTAAATGGATTTGGAGATTCAACCAAGAGAAGGAAGCATTATGGCGAAAACT
TATTCATGGTAAATATGGATCCTCCACTTATTTACATTGGGCATCTCTTGCTAAAACCAAAGGCCCATGGAAAGCCATTGTAAACATCAAGAGCTCATTACAAGTAGAAT
TTGTCACCAAGTTGGGAATGGAGAATCTACTCGTTTTTGGTTTGACCCTTGGGTATCAAACCCCCCATTGGCCAATCAATTTCCCCTTTTGCACAGATTGTCTCGGTGTA
AAGATGCCATGGTGA
Protein sequenceShow/hide protein sequence
MKKGGIGLQSMKDKNKAPLAKWIWRFNQEKEALWRKLIHGKYGSSTYLHWASLAKTKGPWKAIVNIKSSLQVEFVTKLGMENLLVFGLTLGYQTPHWPINFPFCTDCLGV
KMPW