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Lag0030950 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0030950
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr11:3183851..3185779
RNA-Seq ExpressionLag0030950
SyntenyLag0030950
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFZ01086.1 peptidyl-prolyl cis-trans isomerase [Actinidia rufa]1.5e-2743.38Show/hide
Query:  LESLIGQADPPFVDEIMQAEVPHKFRLPT-FPQYDGKKDPVQHLDTYRAWMGFHGATEATKCRAFSLTLTGIAQQWYGKLPPKSIDSFKELSRLFATQFL
        +++L+ Q DPPF + ++ A +  KF+LPT    Y+GK DP+ HLD+Y++ M  HG ++   C+AFS TL G+A+ W+ KL P +IDSF ELSRLF   F+
Subjt:  LESLIGQADPPFVDEIMQAEVPHKFRLPT-FPQYDGKKDPVQHLDTYRAWMGFHGATEATKCRAFSLTLTGIAQQWYGKLPPKSIDSFKELSRLFATQFL

Query:  GARDRRKPQFNLLTVKQRPGESLNGYITRFSNGVVQ
          R+R+K   +L TV Q+  ESL  ++ RF+  +++
Subjt:  GARDRRKPQFNLLTVKQRPGESLNGYITRFSNGVVQ

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]1.7e-2850Show/hide
Query:  VDEIMQAEVPHKFRLPTFPQYDGKKDPVQHLDTYRAWMGFHGATEATKCRAFSLTLTGIAQQWYGKLPPKSIDSFKELSRLFATQFLGARDRRKPQFNLL
        ++EIM+ +VP KF+LPT  Q+DG  D V HLD YR WM  +G +EA KCR FS TL+G A+ W+ +L   SI SFK L++ F TQF+G R R +P   LL
Subjt:  VDEIMQAEVPHKFRLPTFPQYDGKKDPVQHLDTYRAWMGFHGATEATKCRAFSLTLTGIAQQWYGKLPPKSIDSFKELSRLFATQFLGARDRRKPQFNLL

Query:  TVKQRPGESLNGYITRFSNGVVQEMVDWSYNAIS
        T+KQR  ESL+ Y+ RF+   +Q  V+   NA+S
Subjt:  TVKQRPGESLNGYITRFSNGVVQEMVDWSYNAIS

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]4.0e-3348.5Show/hide
Query:  SAKPREAEKE---NLESLIGQADPPFVDEIMQAEVPHKFRLPTFPQYDGKKDPVQHLDTYRAWMGFHGATEATKCRAFSLTLTGIAQQWYGKLPPKSIDS
        S++ R + KE   +LE L+ QAD PF +EIM+ +VP KF+LPT  Q+D   DPV HLD YR WM  +G +EA +CR FS TL G A+ W+ +L   SI S
Subjt:  SAKPREAEKE---NLESLIGQADPPFVDEIMQAEVPHKFRLPTFPQYDGKKDPVQHLDTYRAWMGFHGATEATKCRAFSLTLTGIAQQWYGKLPPKSIDS

Query:  FKELSRLFATQFLGARDRRKPQFNLLTVKQRPGESLNGYITRFSNGVVQEMVDWSYNAISELIGCSG
        FK L+R F TQF+G R R +P   LLT+KQR  ESL  Y+ RF+   +Q  V+   +A+S L   SG
Subjt:  FKELSRLFATQFLGARDRRKPQFNLLTVKQRPGESLNGYITRFSNGVVQEMVDWSYNAISELIGCSG

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]6.9e-3347.31Show/hide
Query:  SAKPREAEKE---NLESLIGQADPPFVDEIMQAEVPHKFRLPTFPQYDGKKDPVQHLDTYRAWMGFHGATEATKCRAFSLTLTGIAQQWYGKLPPKSIDS
        S++ R  +KE   +LE L+GQAD PF +EIM+ +VP KF+LPT   +DG  +PV HLD YR WM  +G ++A +CR FS TL G A+ W+ +L   SI S
Subjt:  SAKPREAEKE---NLESLIGQADPPFVDEIMQAEVPHKFRLPTFPQYDGKKDPVQHLDTYRAWMGFHGATEATKCRAFSLTLTGIAQQWYGKLPPKSIDS

Query:  FKELSRLFATQFLGARDRRKPQFNLLTVKQRPGESLNGYITRFSNGVVQEMVDWSYNAISELIGCSG
        FK L+R F TQF+G R R +P   LLT+KQR  ESL+ Y+ RF+   +Q  ++   +A+S L   SG
Subjt:  FKELSRLFATQFLGARDRRKPQFNLLTVKQRPGESLNGYITRFSNGVVQEMVDWSYNAISELIGCSG

XP_024041095.1 uncharacterized protein LOC112098853 [Citrus clementina]2.3e-2847.41Show/hide
Query:  LESLIGQADPPFVDEIMQAEVPHKFRLPTFPQYDGKKDPVQHLDTYRAWMGFHGATEATKCRAFSLTLTGIAQQWYGKLPPKSIDSFKELSRLFATQFLG
        L+ +  + +PPF  +IM A+ P +F LP    YDG++DP +HL+ YR  M   GA++A  CRAF LTL G A++W+ +L P SI SF +LSR F + F  
Subjt:  LESLIGQADPPFVDEIMQAEVPHKFRLPTFPQYDGKKDPVQHLDTYRAWMGFHGATEATKCRAFSLTLTGIAQQWYGKLPPKSIDSFKELSRLFATQFLG

Query:  ARDRRKPQFNLLTVKQRPGESLNGYITRFSNGVVQ
        AR R KP   LLTVKQ+ GE+L  YI R++N + Q
Subjt:  ARDRRKPQFNLLTVKQRPGESLNGYITRFSNGVVQ

TrEMBL top hitse value%identityAlignment
A0A6J1D7D2 uncharacterized protein LOC1110183078.5e-2950Show/hide
Query:  VDEIMQAEVPHKFRLPTFPQYDGKKDPVQHLDTYRAWMGFHGATEATKCRAFSLTLTGIAQQWYGKLPPKSIDSFKELSRLFATQFLGARDRRKPQFNLL
        ++EIM+ +VP KF+LPT  Q+DG  D V HLD YR WM  +G +EA KCR FS TL+G A+ W+ +L   SI SFK L++ F TQF+G R R +P   LL
Subjt:  VDEIMQAEVPHKFRLPTFPQYDGKKDPVQHLDTYRAWMGFHGATEATKCRAFSLTLTGIAQQWYGKLPPKSIDSFKELSRLFATQFLGARDRRKPQFNLL

Query:  TVKQRPGESLNGYITRFSNGVVQEMVDWSYNAIS
        T+KQR  ESL+ Y+ RF+   +Q  V+   NA+S
Subjt:  TVKQRPGESLNGYITRFSNGVVQEMVDWSYNAIS

A0A6J1DWY0 uncharacterized protein LOC1110252931.9e-3348.5Show/hide
Query:  SAKPREAEKE---NLESLIGQADPPFVDEIMQAEVPHKFRLPTFPQYDGKKDPVQHLDTYRAWMGFHGATEATKCRAFSLTLTGIAQQWYGKLPPKSIDS
        S++ R + KE   +LE L+ QAD PF +EIM+ +VP KF+LPT  Q+D   DPV HLD YR WM  +G +EA +CR FS TL G A+ W+ +L   SI S
Subjt:  SAKPREAEKE---NLESLIGQADPPFVDEIMQAEVPHKFRLPTFPQYDGKKDPVQHLDTYRAWMGFHGATEATKCRAFSLTLTGIAQQWYGKLPPKSIDS

Query:  FKELSRLFATQFLGARDRRKPQFNLLTVKQRPGESLNGYITRFSNGVVQEMVDWSYNAISELIGCSG
        FK L+R F TQF+G R R +P   LLT+KQR  ESL  Y+ RF+   +Q  V+   +A+S L   SG
Subjt:  FKELSRLFATQFLGARDRRKPQFNLLTVKQRPGESLNGYITRFSNGVVQEMVDWSYNAISELIGCSG

A0A6J1E1E7 uncharacterized protein LOC1110255483.3e-3347.31Show/hide
Query:  SAKPREAEKE---NLESLIGQADPPFVDEIMQAEVPHKFRLPTFPQYDGKKDPVQHLDTYRAWMGFHGATEATKCRAFSLTLTGIAQQWYGKLPPKSIDS
        S++ R  +KE   +LE L+GQAD PF +EIM+ +VP KF+LPT   +DG  +PV HLD YR WM  +G ++A +CR FS TL G A+ W+ +L   SI S
Subjt:  SAKPREAEKE---NLESLIGQADPPFVDEIMQAEVPHKFRLPTFPQYDGKKDPVQHLDTYRAWMGFHGATEATKCRAFSLTLTGIAQQWYGKLPPKSIDS

Query:  FKELSRLFATQFLGARDRRKPQFNLLTVKQRPGESLNGYITRFSNGVVQEMVDWSYNAISELIGCSG
        FK L+R F TQF+G R R +P   LLT+KQR  ESL+ Y+ RF+   +Q  ++   +A+S L   SG
Subjt:  FKELSRLFATQFLGARDRRKPQFNLLTVKQRPGESLNGYITRFSNGVVQEMVDWSYNAISELIGCSG

A0A7J0EXS8 Ribonuclease H1.6e-2739.39Show/hide
Query:  LESLIGQADPPFVDEIMQAEVPHKFRLPT-FPQYDGKKDPVQHLDTYRAWMGFHGATEATKCRAFSLTLTGIAQQWYGKLPPKSIDSFKELSRLFATQFL
        +++LI Q +PPF + I++A +  KF+LP     Y+GK DP+ HLD+Y++ M   G ++   C+AFS TL G A+ W+ KL P++IDSF ELSRLF   F+
Subjt:  LESLIGQADPPFVDEIMQAEVPHKFRLPT-FPQYDGKKDPVQHLDTYRAWMGFHGATEATKCRAFSLTLTGIAQQWYGKLPPKSIDSFKELSRLFATQFL

Query:  GARDRRKPQFNLLTVKQRPGESLNGYITRFSNGVVQEMVDWSYNAISELIGCSGREKMQRNEKSK
          R+R+K   +L T+ Q+  ESL  ++ RF+  +++   D  Y A  EL     R + + + K K
Subjt:  GARDRRKPQFNLLTVKQRPGESLNGYITRFSNGVVQEMVDWSYNAISELIGCSGREKMQRNEKSK

A0A7J0FQT7 Peptidyl-prolyl cis-trans isomerase7.2e-2843.38Show/hide
Query:  LESLIGQADPPFVDEIMQAEVPHKFRLPT-FPQYDGKKDPVQHLDTYRAWMGFHGATEATKCRAFSLTLTGIAQQWYGKLPPKSIDSFKELSRLFATQFL
        +++L+ Q DPPF + ++ A +  KF+LPT    Y+GK DP+ HLD+Y++ M  HG ++   C+AFS TL G+A+ W+ KL P +IDSF ELSRLF   F+
Subjt:  LESLIGQADPPFVDEIMQAEVPHKFRLPT-FPQYDGKKDPVQHLDTYRAWMGFHGATEATKCRAFSLTLTGIAQQWYGKLPPKSIDSFKELSRLFATQFL

Query:  GARDRRKPQFNLLTVKQRPGESLNGYITRFSNGVVQ
          R+R+K   +L TV Q+  ESL  ++ RF+  +++
Subjt:  GARDRRKPQFNLLTVKQRPGESLNGYITRFSNGVVQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAATTTTGGCTTGGCAGGTACACAAGGGCGGAAGACTTCAGGCCCAGTTGAAATTGGCCCAAAGGAGCAAAAACCCACCAAAGGTGGACCAACACCTCGGCCTCG
GCCCAAAGCCGAGGCCGAGGATCTGGTCGGCCTCGGCCCAAGGCCGAGGCCGACCAGGCGAACCGGGCAGGTGAGCGCTTGGCCAGATTTTGGCATCAACAGTTGGCGCC
GTCTGTGGGGAGGACGAGAATTGGCACGGGAGCATTGCAAGCCGGTGCGGAGGTTGAAAATTAGGAGAATGGAGCAGGAAAGTCCGTTGGGGGAAGGAAGTCGTCAGCCC
AAGACAGGCACCTCGGACACCGAGATGGAGGTTCTTAGAGGAAGAATGAACGAGATGGGACAAAGTTTGGCAGAGATTTTGGGTATCCTGAAACAGCCGAATCCGAGCAC
GAGGTACCAGAAGAGTTTCGCGCAGGATCGTGAGAAGGGGAAAAGGGTTTACGACGAGGAAGAAGAGGAAACAGGTAGTGCAACCAGCAAACCGCGCAAGCCGAGGGATG
GCAAAGAGCTGGCCTTGAAGGAGCCAGGTCCAAGCAGAAGAGTAGAGCGCAAAAGTGCACTGGAAATTGTAGATGAGGTCAGTACAGTGGGTGCATGTGGTAAGGTAGGG
GCCGAGGCCGAGGCCAAGGCAAGGGAAAAATTAGAGCTTGAAGCAAGGATCCGGGTCGAGATTGAAAGTAAGTTGAGAGCCGAGGCCGAAGCGGCGGCCAGGGCAAAGGC
CGAGGCCGAGGCGGCGGTACGGGTCAAGGTTAATACCCAGGGAAGCGCCAAACCCAGGGAGGCGGAGAAAGAAAATCTAGAGAGCCTGATAGGGCAGGCCGACCCTCCTT
TTGTCGATGAGATTATGCAAGCCGAAGTCCCGCATAAGTTTAGATTACCTACTTTTCCGCAGTATGATGGGAAGAAAGACCCAGTTCAGCACCTGGATACCTACCGGGCA
TGGATGGGGTTTCATGGGGCCACCGAGGCAACAAAATGTCGTGCGTTCTCTCTAACCTTAACTGGGATAGCACAACAGTGGTACGGCAAGTTACCGCCTAAGTCAATTGA
TTCATTCAAAGAATTGTCACGCCTTTTCGCCACGCAGTTTTTGGGTGCTAGGGACCGAAGGAAGCCGCAATTCAACCTGTTGACCGTCAAACAAAGGCCGGGGGAAAGTC
TGAACGGGTATATCACACGGTTCAGCAACGGAGTCGTGCAGGAAATGGTTGATTGGAGCTATAATGCAATATCAGAGTTAATCGGGTGCTCGGGGCGTGAAAAGATGCAA
AGGAATGAAAAGAGTAAAAGTGGAGAAAAGTCAAATCGCGGTCAACAGCAGGCTAGCGTCGAGACGCTAGCTCTTGAGCGTCTCGACGCTCACATTCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATAATTTTGGCTTGGCAGGTACACAAGGGCGGAAGACTTCAGGCCCAGTTGAAATTGGCCCAAAGGAGCAAAAACCCACCAAAGGTGGACCAACACCTCGGCCTCG
GCCCAAAGCCGAGGCCGAGGATCTGGTCGGCCTCGGCCCAAGGCCGAGGCCGACCAGGCGAACCGGGCAGGTGAGCGCTTGGCCAGATTTTGGCATCAACAGTTGGCGCC
GTCTGTGGGGAGGACGAGAATTGGCACGGGAGCATTGCAAGCCGGTGCGGAGGTTGAAAATTAGGAGAATGGAGCAGGAAAGTCCGTTGGGGGAAGGAAGTCGTCAGCCC
AAGACAGGCACCTCGGACACCGAGATGGAGGTTCTTAGAGGAAGAATGAACGAGATGGGACAAAGTTTGGCAGAGATTTTGGGTATCCTGAAACAGCCGAATCCGAGCAC
GAGGTACCAGAAGAGTTTCGCGCAGGATCGTGAGAAGGGGAAAAGGGTTTACGACGAGGAAGAAGAGGAAACAGGTAGTGCAACCAGCAAACCGCGCAAGCCGAGGGATG
GCAAAGAGCTGGCCTTGAAGGAGCCAGGTCCAAGCAGAAGAGTAGAGCGCAAAAGTGCACTGGAAATTGTAGATGAGGTCAGTACAGTGGGTGCATGTGGTAAGGTAGGG
GCCGAGGCCGAGGCCAAGGCAAGGGAAAAATTAGAGCTTGAAGCAAGGATCCGGGTCGAGATTGAAAGTAAGTTGAGAGCCGAGGCCGAAGCGGCGGCCAGGGCAAAGGC
CGAGGCCGAGGCGGCGGTACGGGTCAAGGTTAATACCCAGGGAAGCGCCAAACCCAGGGAGGCGGAGAAAGAAAATCTAGAGAGCCTGATAGGGCAGGCCGACCCTCCTT
TTGTCGATGAGATTATGCAAGCCGAAGTCCCGCATAAGTTTAGATTACCTACTTTTCCGCAGTATGATGGGAAGAAAGACCCAGTTCAGCACCTGGATACCTACCGGGCA
TGGATGGGGTTTCATGGGGCCACCGAGGCAACAAAATGTCGTGCGTTCTCTCTAACCTTAACTGGGATAGCACAACAGTGGTACGGCAAGTTACCGCCTAAGTCAATTGA
TTCATTCAAAGAATTGTCACGCCTTTTCGCCACGCAGTTTTTGGGTGCTAGGGACCGAAGGAAGCCGCAATTCAACCTGTTGACCGTCAAACAAAGGCCGGGGGAAAGTC
TGAACGGGTATATCACACGGTTCAGCAACGGAGTCGTGCAGGAAATGGTTGATTGGAGCTATAATGCAATATCAGAGTTAATCGGGTGCTCGGGGCGTGAAAAGATGCAA
AGGAATGAAAAGAGTAAAAGTGGAGAAAAGTCAAATCGCGGTCAACAGCAGGCTAGCGTCGAGACGCTAGCTCTTGAGCGTCTCGACGCTCACATTCCATAA
Protein sequenceShow/hide protein sequence
MDNFGLAGTQGRKTSGPVEIGPKEQKPTKGGPTPRPRPKAEAEDLVGLGPRPRPTRRTGQVSAWPDFGINSWRRLWGGRELAREHCKPVRRLKIRRMEQESPLGEGSRQP
KTGTSDTEMEVLRGRMNEMGQSLAEILGILKQPNPSTRYQKSFAQDREKGKRVYDEEEEETGSATSKPRKPRDGKELALKEPGPSRRVERKSALEIVDEVSTVGACGKVG
AEAEAKAREKLELEARIRVEIESKLRAEAEAAARAKAEAEAAVRVKVNTQGSAKPREAEKENLESLIGQADPPFVDEIMQAEVPHKFRLPTFPQYDGKKDPVQHLDTYRA
WMGFHGATEATKCRAFSLTLTGIAQQWYGKLPPKSIDSFKELSRLFATQFLGARDRRKPQFNLLTVKQRPGESLNGYITRFSNGVVQEMVDWSYNAISELIGCSGREKMQ
RNEKSKSGEKSNRGQQQASVETLALERLDAHIP