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Lag0030973 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0030973
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr11:3405919..3406374
RNA-Seq ExpressionLag0030973
SyntenyLag0030973
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4273082.1 unnamed protein product [Prunus armeniaca]1.2e-1039.33Show/hide
Query:  MNTDAAWFEKEAAGGISWVVRDSCGSLIAAGLKKIERRMQIKSMEAEAIREGLRKFNQIFKHRHPPLLVEADALEVINNLWGKKDDYSETKNIVDDISSL
        +N DAAW  +   GG+ WVVRDS G ++ AG K   R     +MEAEAIRE L    Q    +   L VE+D+L+VI  + G+ +       IV DI  L
Subjt:  MNTDAAWFEKEAAGGISWVVRDSCGSLIAAGLKKIERRMQIKSMEAEAIREGLRKFNQIFKHRHPPLLVEADALEVINNLWGKKDDYSETKNIVDDISSL

Query:  SKEMGRIDFQHCPRNQNTVAHYASRIAARFFVSRDQRLEFWFYINYPDLW
          +     F + PRN N  AH   +IAA  FVSR   +  W      DLW
Subjt:  SKEMGRIDFQHCPRNQNTVAHYASRIAARFFVSRDQRLEFWFYINYPDLW

CAB4279811.1 unnamed protein product [Prunus armeniaca]2.6e-1038Show/hide
Query:  MNTDAAWFEKEAAGGISWVVRDSCGSLIAAGLKKIERRMQIKSMEAEAIREGLRKFNQIFKHRHPPLLVEADALEVINNLWGKKDDYSETKNIVDDISSL
        +N DAAW  +   GG+ WVVRDS G ++ AG K   R     +MEA+AIRE L    Q    +   L VE+D+L++I  L G+ +     + IV DI  L
Subjt:  MNTDAAWFEKEAAGGISWVVRDSCGSLIAAGLKKIERRMQIKSMEAEAIREGLRKFNQIFKHRHPPLLVEADALEVINNLWGKKDDYSETKNIVDDISSL

Query:  SKEMGRIDFQHCPRNQNTVAHYASRIAARFFVSRDQRLEFWFYINYPDLW
          +     F + PRN N  AH   +I A  FVSR   +  W      DLW
Subjt:  SKEMGRIDFQHCPRNQNTVAHYASRIAARFFVSRDQRLEFWFYINYPDLW

XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]5.2e-1136.43Show/hide
Query:  MNTDAAWFEKEAAGGISWVVRDSCGSLIAAGLKKIERRMQIKSMEAEAIREGLRKFNQIFKHRHPPLLVEADALEVINNLWGKKDDYSETKNIVDDISSL
        +N DAA   K+   G+  +VRD+ G ++A G+K+ + R ++   EAEAI  GL+  NQI       L+VE+D  EV+  L   K   +E   I+ D+   
Subjt:  MNTDAAWFEKEAAGGISWVVRDSCGSLIAAGLKKIERRMQIKSMEAEAIREGLRKFNQIFKHRHPPLLVEADALEVINNLWGKKDDYSETKNIVDDISSL

Query:  SKEMGRIDFQHCPRNQNTVAHYASRIAAR
        SKE  ++ F   PR  NT AH  ++ A R
Subjt:  SKEMGRIDFQHCPRNQNTVAHYASRIAAR

XP_022143535.1 uncharacterized protein LOC111013412 [Momordica charantia]5.8e-1034.65Show/hide
Query:  MNTDAAWFEKEAAGGISWVVRDSCGSLIAAGLKKIERRMQIKSMEAEAIREGLRKFNQIFKHRHPPLLVEADALEVINNLWGKKDDYSETKNIVDDISSL
        +NT+AAW      GGI W++RD  G +I A  + I     I  +E  AI EGLR   Q       P+ +E+D+LE I+ L  +  D +E   ++++I  +
Subjt:  MNTDAAWFEKEAAGGISWVVRDSCGSLIAAGLKKIERRMQIKSMEAEAIREGLRKFNQIFKHRHPPLLVEADALEVINNLWGKKDDYSETKNIVDDISSL

Query:  SKEMGRIDFQHCPRNQNTVAHYASRIA
         K+M  +  +H  R  N VAH  +R A
Subjt:  SKEMGRIDFQHCPRNQNTVAHYASRIA

XP_022156777.1 uncharacterized protein LOC111023608 [Momordica charantia]4.4e-1034.33Show/hide
Query:  MNTDAAWFEKEAAGGISWVVRDSCGSLIAAGLKKIERRMQIKSMEAEAIREGLRKFNQIFKHRHP-------PLLVEADALEVINNLWGKKDDYSETKNI
        +NTDAAW      GGI W++RD  G +I A  + I     I  +E  AI EGLR   Q  +H  P       P+ +E+D+LE I+ L  +  D +E   +
Subjt:  MNTDAAWFEKEAAGGISWVVRDSCGSLIAAGLKKIERRMQIKSMEAEAIREGLRKFNQIFKHRHP-------PLLVEADALEVINNLWGKKDDYSETKNI

Query:  VDDISSLSKEMGRIDFQHCPRNQNTVAHYASRIA
        +++I  + ++M  +  +H  R  N VAH  +R A
Subjt:  VDDISSLSKEMGRIDFQHCPRNQNTVAHYASRIA

TrEMBL top hitse value%identityAlignment
A0A6J1CP26 uncharacterized protein LOC1110134122.8e-1034.65Show/hide
Query:  MNTDAAWFEKEAAGGISWVVRDSCGSLIAAGLKKIERRMQIKSMEAEAIREGLRKFNQIFKHRHPPLLVEADALEVINNLWGKKDDYSETKNIVDDISSL
        +NT+AAW      GGI W++RD  G +I A  + I     I  +E  AI EGLR   Q       P+ +E+D+LE I+ L  +  D +E   ++++I  +
Subjt:  MNTDAAWFEKEAAGGISWVVRDSCGSLIAAGLKKIERRMQIKSMEAEAIREGLRKFNQIFKHRHPPLLVEADALEVINNLWGKKDDYSETKNIVDDISSL

Query:  SKEMGRIDFQHCPRNQNTVAHYASRIA
         K+M  +  +H  R  N VAH  +R A
Subjt:  SKEMGRIDFQHCPRNQNTVAHYASRIA

A0A6J1DNV9 uncharacterized protein LOC1110224031.1e-0932.81Show/hide
Query:  MNTDAAWFEKEAAGGISWVVRDSCGSLIAAGLKKIERRMQIKSMEAEAIREGLRKFNQIFKHRHPPLLVEADALEVINNLWGKKDDYSETKNIVDDISSL
        +N DA+W +    GGI W++R   G ++ AG + +E    +K +EA AI EGLR    +   R  PL +E D+ EV + L  K++D ++T  +V++I +L
Subjt:  MNTDAAWFEKEAAGGISWVVRDSCGSLIAAGLKKIERRMQIKSMEAEAIREGLRKFNQIFKHRHPPLLVEADALEVINNLWGKKDDYSETKNIVDDISSL

Query:  SKEMGRIDFQHCPRNQNTVAHYASRIAA
              + F    R  N  AH  ++ A+
Subjt:  SKEMGRIDFQHCPRNQNTVAHYASRIAA

A0A6J1DSV1 uncharacterized protein LOC1110236082.1e-1034.33Show/hide
Query:  MNTDAAWFEKEAAGGISWVVRDSCGSLIAAGLKKIERRMQIKSMEAEAIREGLRKFNQIFKHRHP-------PLLVEADALEVINNLWGKKDDYSETKNI
        +NTDAAW      GGI W++RD  G +I A  + I     I  +E  AI EGLR   Q  +H  P       P+ +E+D+LE I+ L  +  D +E   +
Subjt:  MNTDAAWFEKEAAGGISWVVRDSCGSLIAAGLKKIERRMQIKSMEAEAIREGLRKFNQIFKHRHP-------PLLVEADALEVINNLWGKKDDYSETKNI

Query:  VDDISSLSKEMGRIDFQHCPRNQNTVAHYASRIA
        +++I  + ++M  +  +H  R  N VAH  +R A
Subjt:  VDDISSLSKEMGRIDFQHCPRNQNTVAHYASRIA

A0A6J5UAY2 Reverse transcriptase domain-containing protein5.7e-1139.33Show/hide
Query:  MNTDAAWFEKEAAGGISWVVRDSCGSLIAAGLKKIERRMQIKSMEAEAIREGLRKFNQIFKHRHPPLLVEADALEVINNLWGKKDDYSETKNIVDDISSL
        +N DAAW  +   GG+ WVVRDS G ++ AG K   R     +MEAEAIRE L    Q    +   L VE+D+L+VI  + G+ +       IV DI  L
Subjt:  MNTDAAWFEKEAAGGISWVVRDSCGSLIAAGLKKIERRMQIKSMEAEAIREGLRKFNQIFKHRHPPLLVEADALEVINNLWGKKDDYSETKNIVDDISSL

Query:  SKEMGRIDFQHCPRNQNTVAHYASRIAARFFVSRDQRLEFWFYINYPDLW
          +     F + PRN N  AH   +IAA  FVSR   +  W      DLW
Subjt:  SKEMGRIDFQHCPRNQNTVAHYASRIAARFFVSRDQRLEFWFYINYPDLW

A0A6J5UV01 Reverse transcriptase domain-containing protein1.3e-1038Show/hide
Query:  MNTDAAWFEKEAAGGISWVVRDSCGSLIAAGLKKIERRMQIKSMEAEAIREGLRKFNQIFKHRHPPLLVEADALEVINNLWGKKDDYSETKNIVDDISSL
        +N DAAW  +   GG+ WVVRDS G ++ AG K   R     +MEA+AIRE L    Q    +   L VE+D+L++I  L G+ +     + IV DI  L
Subjt:  MNTDAAWFEKEAAGGISWVVRDSCGSLIAAGLKKIERRMQIKSMEAEAIREGLRKFNQIFKHRHPPLLVEADALEVINNLWGKKDDYSETKNIVDDISSL

Query:  SKEMGRIDFQHCPRNQNTVAHYASRIAARFFVSRDQRLEFWFYINYPDLW
          +     F + PRN N  AH   +I A  FVSR   +  W      DLW
Subjt:  SKEMGRIDFQHCPRNQNTVAHYASRIAARFFVSRDQRLEFWFYINYPDLW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52990.1 thioredoxin family protein3.5e-0526.05Show/hide
Query:  NTDAAWFEKEAAGGISWVVRDSCGSLIAAGLKKIERRMQIKSMEAEAIREGLRKFNQIFKHRHPPLLVEADALEVINNLWGKKDDYSETKNIVDDISSLS
        N DA+  E +   G+ W++R+S G+++  G+ K + RM  +  E  A+   ++  +      +  ++ E D   V N L   K D    K+ +D I S  
Subjt:  NTDAAWFEKEAAGGISWVVRDSCGSLIAAGLKKIERRMQIKSMEAEAIREGLRKFNQIFKHRHPPLLVEADALEVINNLWGKKDDYSETKNIVDDISSLS

Query:  KEMGRIDFQHCPRNQNTVA
              +F    R QN  A
Subjt:  KEMGRIDFQHCPRNQNTVA

AT2G13980.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.0e-0421.71Show/hide
Query:  NTDAAWFEKEAAGGISWVVRDSCGSLIAAGLKKIERRMQIKSMEAEAIREGLRKFNQIFKHRHPPLLVEADALEVINNLWGKKDDYSETKNIVDDISSLS
        N DA +  +       W++R+  G     G  +++        E +A+   L    Q +   +  +++E D  E + NL      ++   N++DDI   +
Subjt:  NTDAAWFEKEAAGGISWVVRDSCGSLIAAGLKKIERRMQIKSMEAEAIREGLRKFNQIFKHRHPPLLVEADALEVINNLWGKKDDYSETKNIVDDISSLS

Query:  KEMGRIDFQHCPRNQNTVAHYASRIA--ARFFVSRDQRLEFWFYINYPDLWG
        K+   + F    R  N VAH  +++   +  F S    L  W + +Y + +G
Subjt:  KEMGRIDFQHCPRNQNTVAHYASRIA--ARFFVSRDQRLEFWFYINYPDLWG

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.1e-0623.44Show/hide
Query:  NTDAAWFEKEAAGGISWVVRDSCGSLIAAGLKKIERRMQIKSMEAEAIREGLRKFNQIFKHRHPPLLVEADALEVINNLWGKKDDYSETKNIVDDISSLS
        N DA+  E+    G+ W++R+S G++I  G+ K + RM  +  E   +   +      +   H  ++ E D  + I  +   K      ++ +D I S  
Subjt:  NTDAAWFEKEAAGGISWVVRDSCGSLIAAGLKKIERRMQIKSMEAEAIREGLRKFNQIFKHRHPPLLVEADALEVINNLWGKKDDYSETKNIVDDISSLS

Query:  KEMGRIDFQHCPRNQNTVAHYASRIAAR
             I+F    R QN  A + ++ A +
Subjt:  KEMGRIDFQHCPRNQNTVAHYASRIAAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACACTGATGCTGCGTGGTTTGAAAAAGAAGCCGCAGGGGGAATTAGTTGGGTCGTTCGTGATTCTTGTGGATCCTTGATAGCTGCTGGCCTGAAAAAGATTGAGAG
AAGAATGCAAATTAAATCCATGGAAGCTGAGGCAATAAGGGAAGGTTTGAGGAAATTTAACCAAATTTTCAAGCATCGTCACCCTCCCTTGTTAGTCGAAGCGGATGCTC
TGGAGGTAATCAACAATTTGTGGGGGAAGAAGGACGATTACTCAGAGACAAAGAACATCGTGGATGATATCTCTTCCCTCAGCAAGGAAATGGGCAGAATCGACTTTCAA
CACTGCCCTAGGAACCAAAATACAGTAGCCCACTATGCTTCTCGCATTGCCGCGAGATTTTTTGTTTCGCGGGACCAAAGGCTGGAATTCTGGTTTTACATTAATTACCC
TGATTTATGGGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACACTGATGCTGCGTGGTTTGAAAAAGAAGCCGCAGGGGGAATTAGTTGGGTCGTTCGTGATTCTTGTGGATCCTTGATAGCTGCTGGCCTGAAAAAGATTGAGAG
AAGAATGCAAATTAAATCCATGGAAGCTGAGGCAATAAGGGAAGGTTTGAGGAAATTTAACCAAATTTTCAAGCATCGTCACCCTCCCTTGTTAGTCGAAGCGGATGCTC
TGGAGGTAATCAACAATTTGTGGGGGAAGAAGGACGATTACTCAGAGACAAAGAACATCGTGGATGATATCTCTTCCCTCAGCAAGGAAATGGGCAGAATCGACTTTCAA
CACTGCCCTAGGAACCAAAATACAGTAGCCCACTATGCTTCTCGCATTGCCGCGAGATTTTTTGTTTCGCGGGACCAAAGGCTGGAATTCTGGTTTTACATTAATTACCC
TGATTTATGGGGGTAA
Protein sequenceShow/hide protein sequence
MNTDAAWFEKEAAGGISWVVRDSCGSLIAAGLKKIERRMQIKSMEAEAIREGLRKFNQIFKHRHPPLLVEADALEVINNLWGKKDDYSETKNIVDDISSLSKEMGRIDFQ
HCPRNQNTVAHYASRIAARFFVSRDQRLEFWFYINYPDLWG