; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0031020 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031020
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr11:3897916..3902459
RNA-Seq ExpressionLag0031020
SyntenyLag0031020
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5463231.1 hypothetical protein F2P56_019161 [Juglans regia]4.3e-2558.26Show/hide
Query:  SSFMSPVKMDMEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRPSDGASDSGEGGPVESSGGSSRGSKKSSMSDEDWEEMDLRAASAIRLNLAKNILANV
        S   + ++ ++EKFDGR+NFGLWQVQVKDVLIQSGLHKALKGRP+   S          +  + +   +S MSDEDWE++DLRAASAIRL LAKN+LAN+
Subjt:  SSFMSPVKMDMEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRPSDGASDSGEGGPVESSGGSSRGSKKSSMSDEDWEEMDLRAASAIRLNLAKNILANV

Query:  HGISTAKSFGRSLKQ
        HGISTAK     L++
Subjt:  HGISTAKSFGRSLKQ

KAF5765959.1 putative RNA-directed DNA polymerase [Helianthus annuus]4.3e-2562.16Show/hide
Query:  SPVKMDMEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRPSDGASDSGEGGPVESSGGSSRGSKKSSMSDEDWEEMDLRAASAIRLNLAKNILANVHGIS
        SP++ D+EK+DGR+NFGLWQVQVKDVLIQSGLHKAL+G+P+          PV S    S G+ K    DE+WE++DLRAASAIRL LAKN+LANVHGIS
Subjt:  SPVKMDMEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRPSDGASDSGEGGPVESSGGSSRGSKKSSMSDEDWEEMDLRAASAIRLNLAKNILANVHGIS

Query:  TAKSFGRSLKQ
        TAK     L+Q
Subjt:  TAKSFGRSLKQ

KAF7802225.1 cytochrome p450 [Senna tora]3.0e-2662.61Show/hide
Query:  MSSFMSPVKMDMEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRPSDGASDSGEGGPVESSGGSSRGSKKSSMSDEDWEEMDLRAASAIRLNLAKNILAN
        MS F S VK D+EKFDGR+NFGLWQVQVKDVLIQSGLHKAL+G+ S   S+  E                SSMSD DWEE+DLRAAS IRL+LAKN+LAN
Subjt:  MSSFMSPVKMDMEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRPSDGASDSGEGGPVESSGGSSRGSKKSSMSDEDWEEMDLRAASAIRLNLAKNILAN

Query:  VHGISTAKSFGRSLK
        V GISTAK   + L+
Subjt:  VHGISTAKSFGRSLK

KAG7968253.1 hypothetical protein I3843_08G145100 [Carya illinoinensis]1.3e-2443Show/hide
Query:  WNPRVPNKEVVSLIIVMVEALGGRSLTSGKILEA--PLSHLERFK------------EVMG----------SKLARSEAEMSSFMSPVKMDMEKFDGRMN
        W   V     V+ I ++  +L   S  S  ++E   P+S  +RFK            EV+G           +L  +    + F++    ++EKFDGR+N
Subjt:  WNPRVPNKEVVSLIIVMVEALGGRSLTSGKILEA--PLSHLERFK------------EVMG----------SKLARSEAEMSSFMSPVKMDMEKFDGRMN

Query:  FGLWQVQVKDVLIQSGLHKALKGRP----SDGASDSGEGGPVESSGGSSRGSKKSSMSDEDWEEMDLRAASAIRLNLAKNILANVHGISTAKSFGRSLKQ
        FGLWQ+QVKDVLIQSGLHKALK RP    S G S +GEG              +  MSDE+WE++DLR ASAIRL LAKN+LANVHGISTAK F + L++
Subjt:  FGLWQVQVKDVLIQSGLHKALKGRP----SDGASDSGEGGPVESSGGSSRGSKKSSMSDEDWEEMDLRAASAIRLNLAKNILANVHGISTAKSFGRSLKQ

XP_022139673.1 uncharacterized protein LOC111010521 [Momordica charantia]4.7e-4080Show/hide
Query:  EAEMSSFMSPVKMDMEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRPSDGASD--SGEGGPVESSGGSSRGSKKSSMSDEDWEEMDLRAASAIRLNLAK
        EA+MS FMSPVK+D+EKFDG +NFGLWQVQVKDVLIQS LHKALKGRPS+GAS+  S +GGP+ESSGGSSRGSKKSSMS EDWEEMDLRAASAIR +LAK
Subjt:  EAEMSSFMSPVKMDMEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRPSDGASD--SGEGGPVESSGGSSRGSKKSSMSDEDWEEMDLRAASAIRLNLAK

Query:  NILANVHGISTAKSFGRSLK
        NILANVH ISTAK     L+
Subjt:  NILANVHGISTAKSFGRSLK

TrEMBL top hitse value%identityAlignment
A0A2G2XLY2 Uncharacterized protein7.4e-2364Show/hide
Query:  KMDMEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRPSDGASDSGEGGPVESSGGSSRGSKKSSMSDEDWEEMDLRAASAIRLNLAKNILANVHGISTAK
        K ++EKFDGR+NFGLWQVQVKDVLIQSGLHK LK RP+     SG+G        SS+ S+KS +SDE+WEE+D++AAS IRL LAKN+LANV G+ST K
Subjt:  KMDMEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRPSDGASDSGEGGPVESSGGSSRGSKKSSMSDEDWEEMDLRAASAIRLNLAKNILANVHGISTAK

A0A2G2YJH4 Uncharacterized protein1.1e-2152.94Show/hide
Query:  FMSPVKMDMEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRPSDGASDSGEGGPVESSGGSSRGSKKSSMSDEDWEEMDLRAASAIRLNLAKNILANVHG
        +M   K ++EKFDGR+NFGLWQVQVKDVLIQSGLHKALK RP+     SG+G        SS  S+KS +SDE+WEE+D++  S IRL LAK +L NV G
Subjt:  FMSPVKMDMEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRPSDGASDSGEGGPVESSGGSSRGSKKSSMSDEDWEEMDLRAASAIRLNLAKNILANVHG

Query:  ISTAKSFGRSLKQCIRQRT
        +ST K     L++  + ++
Subjt:  ISTAKSFGRSLKQCIRQRT

A0A2G3AMB5 Uncharacterized protein3.7e-2252.24Show/hide
Query:  SPVKM----DMEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRPSDGASDSGEGGPVESSGGSSRGSKKSSMSDEDWEEMDLRAASAIRLNLAKNILANV
        +PVKM    ++EKFDGR+NF LWQVQVKDVLIQSGL+KALK RP+     S +G        SS+ S+K  +SDE+WEE+D++AAS IRL LAKN+LANV
Subjt:  SPVKM----DMEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRPSDGASDSGEGGPVESSGGSSRGSKKSSMSDEDWEEMDLRAASAIRLNLAKNILANV

Query:  HGISTAKSF---------GRSLKQCIRQRTSRIG
         G+ST K            +SLK C + +  +IG
Subjt:  HGISTAKSF---------GRSLKQCIRQRTSRIG

A0A2P5D0W5 Pol-like polyprotein/retrotransposon1.3e-2262.86Show/hide
Query:  FMSPVKMDMEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRPSDGASDSGEGGPVESSGGSSRGSKKSSMSDEDWEEMDLRAASAIRLNLAKNILANVHG
        F +PV+ D+EKFDG +NFGLWQ+QVKD+LIQSGLHKALKGR              E+  G  R S+KSSMSDEDWE++D RAASAIR+ LAKN+LANV  
Subjt:  FMSPVKMDMEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRPSDGASDSGEGGPVESSGGSSRGSKKSSMSDEDWEEMDLRAASAIRLNLAKNILANVHG

Query:  ISTAK
        I+TAK
Subjt:  ISTAK

A0A6J1CG82 uncharacterized protein LOC1110105212.3e-4080Show/hide
Query:  EAEMSSFMSPVKMDMEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRPSDGASD--SGEGGPVESSGGSSRGSKKSSMSDEDWEEMDLRAASAIRLNLAK
        EA+MS FMSPVK+D+EKFDG +NFGLWQVQVKDVLIQS LHKALKGRPS+GAS+  S +GGP+ESSGGSSRGSKKSSMS EDWEEMDLRAASAIR +LAK
Subjt:  EAEMSSFMSPVKMDMEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRPSDGASD--SGEGGPVESSGGSSRGSKKSSMSDEDWEEMDLRAASAIRLNLAK

Query:  NILANVHGISTAKSFGRSLK
        NILANVH ISTAK     L+
Subjt:  NILANVHGISTAKSFGRSLK

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.0e-0934.75Show/hide
Query:  MSPVKMDMEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRPSDGASDSGEGGPVESSGGSSRGSKKSSMSDEDWEEMDLRAASAIRLNLAKNILANVHGI
        MS VK ++ KF+G   F  WQ +++D+LIQ GLHK L                V+S        K  +M  EDW ++D RAASAIRL+L+ +++ N+   
Subjt:  MSPVKMDMEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRPSDGASDSGEGGPVESSGGSSRGSKKSSMSDEDWEEMDLRAASAIRLNLAKNILANVHGI

Query:  STAKSFGRSLKQCIRQRT
         TA+     L+     +T
Subjt:  STAKSFGRSLKQCIRQRT

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCACTGTATTTGTCCCGATGCAAGAAGTTGACGCCGGTAGGAATGGGATTTCACATAGCAACGACCTTGCGTCCACGAAAATATATTCCCACTCGAATCTC
AGGGGTGATCATCGGTCGGTCAGCGTCGGTTTTGGGCTCAAACCGACGTCGACCACCGACACGTCGGTTTCCGTCGGTTTGGAAGTAGTTGGTTACGCCGACCGC
CCGACTACACCGACGCTAGATATAATAGTTCTCACATCTAAAGACTTTGTTCTTTATATTATCACATGTCATGATAGTCCCTTACAAGTGGTATTAGAGCCATGC
CCCGGGAGTAGCCGTGTTGGGTGGAATCCTCGGGTTCCGAACAAAGAAGTTGTGAGCCTTATAATAGTCATGGTGGAGGCTCTGGGTGGACGGTCCCTTACAAGT
GGCAAAATATTAGAAGCGCCTTTGTCCCACCTTGAAAGGTTCAAGGAAGTGATGGGCTCCAAATTAGCTAGGAGTGAGGCAGAAATGTCAAGCTTCATGAGTCCA
GTGAAGATGGACATGGAGAAATTTGATGGAAGGATGAACTTTGGCTTGTGGCAAGTGCAAGTCAAGGATGTGTTGATACAATCTGGGTTACACAAGGCTTTGAAG
GGAAGACCAAGCGATGGTGCTTCTGACAGCGGTGAAGGTGGTCCAGTGGAGTCCAGTGGCGGTTCCAGCAGAGGTTCGAAGAAGTCCAGTATGAGTGATGAAGAT
TGGGAGGAAATGGATTTGAGAGCTGCAAGTGCAATCAGACTCAATTTAGCTAAGAACATTCTTGCAAATGTGCATGGAATTTCGACAGCCAAAAGCTTTGGGAGA
AGCTTGAAGCAATGTATCAGGCAAAGAACATCTCGAATCGGTTGTACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCACTGTATTTGTCCCGATGCAAGAAGTTGACGCCGGTAGGAATGGGATTTCACATAGCAACGACCTTGCGTCCACGAAAATATATTCCCACTCGAATCTC
AGGGGTGATCATCGGTCGGTCAGCGTCGGTTTTGGGCTCAAACCGACGTCGACCACCGACACGTCGGTTTCCGTCGGTTTGGAAGTAGTTGGTTACGCCGACCGC
CCGACTACACCGACGCTAGATATAATAGTTCTCACATCTAAAGACTTTGTTCTTTATATTATCACATGTCATGATAGTCCCTTACAAGTGGTATTAGAGCCATGC
CCCGGGAGTAGCCGTGTTGGGTGGAATCCTCGGGTTCCGAACAAAGAAGTTGTGAGCCTTATAATAGTCATGGTGGAGGCTCTGGGTGGACGGTCCCTTACAAGT
GGCAAAATATTAGAAGCGCCTTTGTCCCACCTTGAAAGGTTCAAGGAAGTGATGGGCTCCAAATTAGCTAGGAGTGAGGCAGAAATGTCAAGCTTCATGAGTCCA
GTGAAGATGGACATGGAGAAATTTGATGGAAGGATGAACTTTGGCTTGTGGCAAGTGCAAGTCAAGGATGTGTTGATACAATCTGGGTTACACAAGGCTTTGAAG
GGAAGACCAAGCGATGGTGCTTCTGACAGCGGTGAAGGTGGTCCAGTGGAGTCCAGTGGCGGTTCCAGCAGAGGTTCGAAGAAGTCCAGTATGAGTGATGAAGAT
TGGGAGGAAATGGATTTGAGAGCTGCAAGTGCAATCAGACTCAATTTAGCTAAGAACATTCTTGCAAATGTGCATGGAATTTCGACAGCCAAAAGCTTTGGGAGA
AGCTTGAAGCAATGTATCAGGCAAAGAACATCTCGAATCGGTTGTACCTGA
Protein sequenceShow/hide protein sequence
MFTVFVPMQEVDAGRNGISHSNDLASTKIYSHSNLRGDHRSVSVGFGLKPTSTTDTSVSVGLEVVGYADRPTTPTLDIIVLTSKDFVLYIITCHDSPLQVVLEPC
PGSSRVGWNPRVPNKEVVSLIIVMVEALGGRSLTSGKILEAPLSHLERFKEVMGSKLARSEAEMSSFMSPVKMDMEKFDGRMNFGLWQVQVKDVLIQSGLHKALK
GRPSDGASDSGEGGPVESSGGSSRGSKKSSMSDEDWEEMDLRAASAIRLNLAKNILANVHGISTAKSFGRSLKQCIRQRTSRIGCT