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Lag0031026 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031026
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr11:3942072..3946721
RNA-Seq ExpressionLag0031026
SyntenyLag0031026
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEC72931.1 hypothetical protein OsI_06781 [Oryza sativa Indica Group]1.5e-0435.65Show/hide
Query:  KGGLGWIVRDSCGSPICAGMKSVSQSWPIKVLEAKAMWEGINSVFTLSNRPSRIEAGADCSELIAILNGEEDDRWELKSCA-EAIRFLSSDQGVLAFKLC
        KGG+G ++RDS G+ I A  K +++       E +A  EG+N V   +  P  +E   DC  ++ +LN  E DR EL +   EA R L+  + +L  K+ 
Subjt:  KGGLGWIVRDSCGSPICAGMKSVSQSWPIKVLEAKAMWEGINSVFTLSNRPSRIEAGADCSELIAILNGEEDDRWELKSCA-EAIRFLSSDQGVLAFKLC

Query:  PRSINGVANSLARAA
         RS N V++ LA  A
Subjt:  PRSINGVANSLARAA

KAG6599977.1 hypothetical protein SDJN03_05210, partial [Cucurbita argyrosperma subsp. sororia]2.7e-0634.65Show/hide
Query:  GKGGLGWIVRDSCGSPICAGMKSVSQSWPIKVLEAKAMWEGINSVFTLSNRPSRIEAGADCSELIAILNGEEDDRWELKSCAEAIRFLSSDQGVLAFKLC
        GKGG+ W++ DS GS IC   K + + W +K+LE KAM EG+ +   +    S         EL  ILN    D  EL +  + I  L    G+++F   
Subjt:  GKGGLGWIVRDSCGSPICAGMKSVSQSWPIKVLEAKAMWEGINSVFTLSNRPSRIEAGADCSELIAILNGEEDDRWELKSCAEAIRFLSSDQGVLAFKLC

Query:  P
        P
Subjt:  P

XP_015383853.1 uncharacterized protein LOC107176237 [Citrus sinensis]3.3e-0427.37Show/hide
Query:  MMEIESLARYVGVI-SYSKMSERRQHFRAYPRARNSR---------FRVGDDPCVSCSCCGKGGLGWIVRDSCGSPICAGMKSVSQSWPIKVLEAKAMWE
        M  + +++R   V+ +Y ++ + +   +A   ++N +         F+V  D  V+     K GLG ++RDSC     A +K+   +  +K  EA+A+  
Subjt:  MMEIESLARYVGVI-SYSKMSERRQHFRAYPRARNSR---------FRVGDDPCVSCSCCGKGGLGWIVRDSCGSPICAGMKSVSQSWPIKVLEAKAMWE

Query:  GINSVFTLSNRPSRIEAGADCSELIAILNGEEDDRWELKSCAEAIRFLSSDQGVLAFKLCPRSINGVANSLARAAAGSN
        G+  V   S     I   +DC E++ ++N +E  R E+      I+ LS D    +    PRS N  A+SLA+ A  +N
Subjt:  GINSVFTLSNRPSRIEAGADCSELIAILNGEEDDRWELKSCAEAIRFLSSDQGVLAFKLCPRSINGVANSLARAAAGSN

XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]7.8e-0635.34Show/hide
Query:  KGGLGWIVRDSCGSPICAGMKSVSQSWPIKVLEAKAMWEGINSVFTLS-NRPSRIEAGADCSELIAILNGEEDDRWELKSCAEAIRFLSSDQGVLAFKLC
        +GG+GWI+R   G  + AG + V     +K+LEA A+ EG+ ++  L   RP  IE   D +E+ ++LN + +D  +     E I  L     +LAF   
Subjt:  KGGLGWIVRDSCGSPICAGMKSVSQSWPIKVLEAKAMWEGINSVFTLS-NRPSRIEAGADCSELIAILNGEEDDRWELKSCAEAIRFLSSDQGVLAFKLC

Query:  PRSINGVANSLARAAA
         R  NG A+SLA+ A+
Subjt:  PRSINGVANSLARAAA

XP_025877173.1 uncharacterized protein LOC107278050 isoform X1 [Oryza sativa Japonica Group]2.5e-0430.71Show/hide
Query:  GKGGLGWIVRDSCGSPICAGMKSVSQSWPIKVLEAKAMWEGINSVFTLSNRPSRIEAGADCSELIAILNGEEDDRWELKSCAEAIRFLSSDQGVLAFKLC
        GKGG+G I+RD+ GS + A  KS+         E +A  EG+      + RP  IE   DC  L+ +L     D  EL +  + I+ L S++  +     
Subjt:  GKGGLGWIVRDSCGSPICAGMKSVSQSWPIKVLEAKAMWEGINSVFTLSNRPSRIEAGADCSELIAILNGEEDDRWELKSCAEAIRFLSSDQGVLAFKLC

Query:  PRSINGVANSLARAAAGSNCHSFFVDSGSPSMLEEGADED
         RS NGV++ LA  A   +    + + GS + + +   ED
Subjt:  PRSINGVANSLARAAAGSNCHSFFVDSGSPSMLEEGADED

TrEMBL top hitse value%identityAlignment
A0A6J1DNV9 uncharacterized protein LOC1110224033.8e-0635.34Show/hide
Query:  KGGLGWIVRDSCGSPICAGMKSVSQSWPIKVLEAKAMWEGINSVFTLS-NRPSRIEAGADCSELIAILNGEEDDRWELKSCAEAIRFLSSDQGVLAFKLC
        +GG+GWI+R   G  + AG + V     +K+LEA A+ EG+ ++  L   RP  IE   D +E+ ++LN + +D  +     E I  L     +LAF   
Subjt:  KGGLGWIVRDSCGSPICAGMKSVSQSWPIKVLEAKAMWEGINSVFTLS-NRPSRIEAGADCSELIAILNGEEDDRWELKSCAEAIRFLSSDQGVLAFKLC

Query:  PRSINGVANSLARAAA
         R  NG A+SLA+ A+
Subjt:  PRSINGVANSLARAAA

A0A803MUM1 Uncharacterized protein7.9e-0430.56Show/hide
Query:  LGWIVRDSCGSPICAGMKSVSQSWPIKVLEAKAMWEGINSVFTLSNRPSRIEAGADCSELIAILNGEEDDRWELKSCAEAIRFLSSDQGVLAFKLCPRSI
        +G +VRD  G  + AG + V QSW   ++EAKAM  G+     +     R+   +DC  L+ ++NG   D   L   A+ I+ ++     + F    R  
Subjt:  LGWIVRDSCGSPICAGMKSVSQSWPIKVLEAKAMWEGINSVFTLSNRPSRIEAGADCSELIAILNGEEDDRWELKSCAEAIRFLSSDQGVLAFKLCPRSI

Query:  NGVANSLA
        N VA+++A
Subjt:  NGVANSLA

B8AFN2 RNase H domain-containing protein7.2e-0535.65Show/hide
Query:  KGGLGWIVRDSCGSPICAGMKSVSQSWPIKVLEAKAMWEGINSVFTLSNRPSRIEAGADCSELIAILNGEEDDRWELKSCA-EAIRFLSSDQGVLAFKLC
        KGG+G ++RDS G+ I A  K +++       E +A  EG+N V   +  P  +E   DC  ++ +LN  E DR EL +   EA R L+  + +L  K+ 
Subjt:  KGGLGWIVRDSCGSPICAGMKSVSQSWPIKVLEAKAMWEGINSVFTLSNRPSRIEAGADCSELIAILNGEEDDRWELKSCA-EAIRFLSSDQGVLAFKLC

Query:  PRSINGVANSLARAA
         RS N V++ LA  A
Subjt:  PRSINGVANSLARAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTGATCGGCGAAGGTCTGAGAAAGTACTTGGAGGTGTGTAGAGAGAGAAAACCATCGATGATCGTCGAAGCGGACGCGTCTGAGGTTATCAAAACTCTAAACCT
CGAATGCGAAGATCTTTCAAATTCCAAGTCAGTGATGATGGAGATTGAATCCCTAGCGAGGTATGTGGGTGTAATCTCATACTCAAAAATGTCGGAGAGGCGTCAACACT
TTCGCGCATATCCTCGCGCGCGCAACAGTCGGTTTCGCGTCGGAGATGATCCCTGTGTTTCGTGTAGTTGCTGCGGCAAAGGTGGCTTAGGTTGGATCGTTCGTGACTCC
TGTGGGTCTCCCATCTGCGCCGGAATGAAATCAGTTTCTCAGTCGTGGCCAATTAAAGTGCTCGAGGCGAAGGCGATGTGGGAAGGAATTAATTCTGTGTTTACCTTGTC
TAATAGACCGTCTCGGATTGAAGCAGGGGCTGACTGCTCCGAGCTCATCGCTATCCTTAATGGAGAAGAAGATGATCGCTGGGAATTGAAGAGCTGCGCCGAAGCTATTC
GTTTCCTGTCCTCTGACCAGGGAGTGCTCGCTTTCAAGCTCTGCCCTAGATCGATTAATGGAGTTGCCAATTCCCTTGCTCGTGCTGCAGCAGGGAGCAATTGCCATTCT
TTTTTTGTTGATTCTGGGTCTCCTTCCATGCTGGAAGAAGGAGCTGACGAGGACAACCCGACACGAGCCAAAAATAGGACCGGAGGATGGACCCCGGAGGCGAAACGGGC
CAATGGGTCGGGCCAAGGCCGAAGGGATCGGGCTTTTGGCCCGACCCCGTTTGCCTCCATTTGGTCTTTGCTGCCCTTGGTCGCTCCGGTTCCACATGGTTCATCCCGAA
ATGCCTCTGAATTCCCAAAAACCCCAGGAGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGTGATCGGCGAAGGTCTGAGAAAGTACTTGGAGGTGTGTAGAGAGAGAAAACCATCGATGATCGTCGAAGCGGACGCGTCTGAGGTTATCAAAACTCTAAACCT
CGAATGCGAAGATCTTTCAAATTCCAAGTCAGTGATGATGGAGATTGAATCCCTAGCGAGGTATGTGGGTGTAATCTCATACTCAAAAATGTCGGAGAGGCGTCAACACT
TTCGCGCATATCCTCGCGCGCGCAACAGTCGGTTTCGCGTCGGAGATGATCCCTGTGTTTCGTGTAGTTGCTGCGGCAAAGGTGGCTTAGGTTGGATCGTTCGTGACTCC
TGTGGGTCTCCCATCTGCGCCGGAATGAAATCAGTTTCTCAGTCGTGGCCAATTAAAGTGCTCGAGGCGAAGGCGATGTGGGAAGGAATTAATTCTGTGTTTACCTTGTC
TAATAGACCGTCTCGGATTGAAGCAGGGGCTGACTGCTCCGAGCTCATCGCTATCCTTAATGGAGAAGAAGATGATCGCTGGGAATTGAAGAGCTGCGCCGAAGCTATTC
GTTTCCTGTCCTCTGACCAGGGAGTGCTCGCTTTCAAGCTCTGCCCTAGATCGATTAATGGAGTTGCCAATTCCCTTGCTCGTGCTGCAGCAGGGAGCAATTGCCATTCT
TTTTTTGTTGATTCTGGGTCTCCTTCCATGCTGGAAGAAGGAGCTGACGAGGACAACCCGACACGAGCCAAAAATAGGACCGGAGGATGGACCCCGGAGGCGAAACGGGC
CAATGGGTCGGGCCAAGGCCGAAGGGATCGGGCTTTTGGCCCGACCCCGTTTGCCTCCATTTGGTCTTTGCTGCCCTTGGTCGCTCCGGTTCCACATGGTTCATCCCGAA
ATGCCTCTGAATTCCCAAAAACCCCAGGAGCATGA
Protein sequenceShow/hide protein sequence
MDVIGEGLRKYLEVCRERKPSMIVEADASEVIKTLNLECEDLSNSKSVMMEIESLARYVGVISYSKMSERRQHFRAYPRARNSRFRVGDDPCVSCSCCGKGGLGWIVRDS
CGSPICAGMKSVSQSWPIKVLEAKAMWEGINSVFTLSNRPSRIEAGADCSELIAILNGEEDDRWELKSCAEAIRFLSSDQGVLAFKLCPRSINGVANSLARAAAGSNCHS
FFVDSGSPSMLEEGADEDNPTRAKNRTGGWTPEAKRANGSGQGRRDRAFGPTPFASIWSLLPLVAPVPHGSSRNASEFPKTPGA