; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0031094 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031094
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr11:4768511..4769272
RNA-Seq ExpressionLag0031094
SyntenyLag0031094
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_012851712.1 PREDICTED: uncharacterized protein LOC105971405 [Erythranthe guttata]4.9e-4640.93Show/hide
Query:  VNSRGLSGGLALFWSDDVEMQLLTYSKGHIDTILSYE---TKCFRFTGFYGEPDPLNRHVSWTLISRLKDFSNLPWVMAGDFNEILHEKERDGGREAVLS
        V+  G SGGLAL W  D++++L++YS  HID  + YE      +R TGFYG P+   +++SW LI  L+D   +PW++ GDFNEIL   E+ GG   + +
Subjt:  VNSRGLSGGLALFWSDDVEMQLLTYSKGHIDTILSYE---TKCFRFTGFYGEPDPLNRHVSWTLISRLKDFSNLPWVMAGDFNEILHEKERDGGREAVLS

Query:  LSRGFSNALNESELRDVGYNGSPFTWMNRRHGVDFVRKRLDRCLVNSDLFLLFHSIVVNHLDFLCSDHRPLEICLQDHQSPCQRRNRKRSYRFEEAWTRY
          R F N L +  L D+G+ GSPFTW N RH  D VR RLDRC  N+    LF    V HL++  SDH P++  L+D ++  Q   +KR +RFE  W R 
Subjt:  LSRGFSNALNESELRDVGYNGSPFTWMNRRHGVDFVRKRLDRCLVNSDLFLLFHSIVVNHLDFLCSDHRPLEICLQDHQSPCQRRNRKRSYRFEEAWTRY

Query:  EDCEEMIRRSWRQTHESNKVEDLMSNLKQTAVTLHTW
        +DCE++I + W      + +EDL+    +  + L  W
Subjt:  EDCEEMIRRSWRQTHESNKVEDLMSNLKQTAVTLHTW

XP_012857002.1 PREDICTED: uncharacterized protein LOC105976270 [Erythranthe guttata]3.9e-4339Show/hide
Query:  NVFVVNSRGLSGGLALFWSDDVEMQLLTYSKGHIDTIL---SYETKCFRFTGFYGEPDPLNRHVSWTLISRLKDFSNLPWVMAGDFNEILHEKERDGGRE
        N F ++  G SGGL LFW  +VE+ L++YS  HID  +   ++ +K +R TGFYG P+   RH SW ++ +L++  NLPWV+ GD+NEIL   E++GG  
Subjt:  NVFVVNSRGLSGGLALFWSDDVEMQLLTYSKGHIDTIL---SYETKCFRFTGFYGEPDPLNRHVSWTLISRLKDFSNLPWVMAGDFNEILHEKERDGGRE

Query:  AVLSLSRGFSNALNESELRDVGYNGSPFTWMNRRHGVDFVRKRLDRCLVNSDLFLLFHSIVVNHLDFLCSDHRPLEICLQDHQSPCQRRNRKRSYRFEEA
         + +    F  AL++  L D+ + G  FTW N R     VR RLDR   ++D  L F   +V+H+ +  SDH PL++ L   Q+  +RR +KR +RFE  
Subjt:  AVLSLSRGFSNALNESELRDVGYNGSPFTWMNRRHGVDFVRKRLDRCLVNSDLFLLFHSIVVNHLDFLCSDHRPLEICLQDHQSPCQRRNRKRSYRFEEA

Query:  WTRYEDCEEMIRRSWRQTHESNKVEDLMSNLKQTAVTLHTW
        W R +DCEE+++++W+    S+ +ED++   K   + L  W
Subjt:  WTRYEDCEEMIRRSWRQTHESNKVEDLMSNLKQTAVTLHTW

XP_012857846.1 PREDICTED: uncharacterized protein LOC105977118 [Erythranthe guttata]4.2e-4540.51Show/hide
Query:  VNSRGLSGGLALFWSDDVEMQLLTYSKGHIDTILSYE---TKCFRFTGFYGEPDPLNRHVSWTLISRLKDFSNLPWVMAGDFNEILHEKERDGGREAVLS
        V+  G SGGLAL W  D++++L++YS  HID  + YE      +R TGFYG P+   +++SW LI  L+D   +PW++ GDFNEIL   E+ GG   + +
Subjt:  VNSRGLSGGLALFWSDDVEMQLLTYSKGHIDTILSYE---TKCFRFTGFYGEPDPLNRHVSWTLISRLKDFSNLPWVMAGDFNEILHEKERDGGREAVLS

Query:  LSRGFSNALNESELRDVGYNGSPFTWMNRRHGVDFVRKRLDRCLVNSDLFLLFHSIVVNHLDFLCSDHRPLEICLQDHQSPCQRRNRKRSYRFEEAWTRY
          R F N L +  L D+G+ GSPFTW N R   D VR RLDRC  N+    LF    V HL++  SDH P++  L+D ++  Q   +KR +RFE  W R 
Subjt:  LSRGFSNALNESELRDVGYNGSPFTWMNRRHGVDFVRKRLDRCLVNSDLFLLFHSIVVNHLDFLCSDHRPLEICLQDHQSPCQRRNRKRSYRFEEAWTRY

Query:  EDCEEMIRRSWRQTHESNKVEDLMSNLKQTAVTLHTW
        +DCE++I + W      + +EDL+    +  + L  W
Subjt:  EDCEEMIRRSWRQTHESNKVEDLMSNLKQTAVTLHTW

XP_028075737.1 uncharacterized protein LOC114277953 [Camellia sinensis]1.3e-4339.68Show/hide
Query:  MNRLKEFLSFKNVFVVNSRGLSGGLALFWSDDVEMQLLTYSKGHIDTILSYET--KCFRFTGFYGEPDPLNRHVSWTLISRLKDFSNLPWVMAGDFNEIL
        M R++  L  +  F V+  GLSGGLAL W  ++++Q+ ++S+GH+D+I+  E+    + FTGFYG P    R  SW L+ RL+D  +LPW+ AGDFNEIL
Subjt:  MNRLKEFLSFKNVFVVNSRGLSGGLALFWSDDVEMQLLTYSKGHIDTILSYET--KCFRFTGFYGEPDPLNRHVSWTLISRLKDFSNLPWVMAGDFNEIL

Query:  HEKERDGGREAVLSLSRGFSNALNESELRDVGYNGSPFTWMNRRHGVDFVRKRLDRCLVNSDLFLLFHSIVVNHLDFLCSDHRPLEICLQDHQSPCQRRN
        +  E+ G          GF   L++ +L D+G+ G+ FTW N R G   +R+RLDRC+VN      F    V HL    SDH P+ + L+  ++    R 
Subjt:  HEKERDGGREAVLSLSRGFSNALNESELRDVGYNGSPFTWMNRRHGVDFVRKRLDRCLVNSDLFLLFHSIVVNHLDFLCSDHRPLEICLQDHQSPCQRRN

Query:  RKRS-YRFEEAWTRYEDCEEMIRRSWRQTHESNKVEDLMSNLKQTAVTLHTW
        + R  YRFE  W R EDCE +I R W Q    + VE +   L+  A  L  W
Subjt:  RKRS-YRFEEAWTRYEDCEEMIRRSWRQTHESNKVEDLMSNLKQTAVTLHTW

XP_030924992.1 uncharacterized protein LOC115952038 [Quercus lobata]1.8e-4340.62Show/hide
Query:  MNRLKEFLSFKNVFVVNSRGLSGGLALFWSDDVEMQLLTYSKGHIDTILSYE-TKCFRFTGFYGEPDPLNRHVSWTLISRLKDFSNLPWVMAGDFNEILH
        M +L+  L F N+F+V  R LSGGLALFW +++++ + T+S  HID +++      +RFTGFYG P+  NR  SWTL+  L   ++LPWV  GDFNEI  
Subjt:  MNRLKEFLSFKNVFVVNSRGLSGGLALFWSDDVEMQLLTYSKGHIDTILSYE-TKCFRFTGFYGEPDPLNRHVSWTLISRLKDFSNLPWVMAGDFNEILH

Query:  EKERDGGREAVLSLSRGFSNALNESELRDVGYNGSPFTWMNRRHGVDFVRKRLDRCLVNSDLFLLFHSIVVNHLDFLCSDHRPLEICLQDHQSPCQRRNR
         +E+ GG        +GF + L+    +D+G++G PFTW N R     V  RLDR + +++  L+F SI ++HL    SDH+P+ +C  D    C+    
Subjt:  EKERDGGREAVLSLSRGFSNALNESELRDVGYNGSPFTWMNRRHGVDFVRKRLDRCLVNSDLFLLFHSIVVNHLDFLCSDHRPLEICLQDHQSPCQRRNR

Query:  KRSYRFEEAWTRYEDCEEMIRRSW
        +R +RFEE WT+ E CE ++  +W
Subjt:  KRSYRFEEAWTRYEDCEEMIRRSW

TrEMBL top hitse value%identityAlignment
A0A2N9FNH6 Reverse transcriptase domain-containing protein2.5e-4339.57Show/hide
Query:  VNSRGLSGGLALFWSDDVEMQLLTYSKGHID-TILSYETKCFRFTGFYGEPDPLNRHVSWTLISRLKDFSNLPWVMAGDFNEILHEKERDGGREAVLSLS
        V   G  GGLAL W + +++  L++S  HID TI S  T  + FTGFYG PD   RH SWTL+ RLK + ++PW++ GDFNE+L   E+ G         
Subjt:  VNSRGLSGGLALFWSDDVEMQLLTYSKGHID-TILSYETKCFRFTGFYGEPDPLNRHVSWTLISRLKDFSNLPWVMAGDFNEILHEKERDGGREAVLSLS

Query:  RGFSNALNESELRDVGYNGSPFTWMNRRHGVDFVRKRLDRCLVNSDLFLLFHSIVVNHLDFLCSDHRPLEICLQDHQSPCQRRNRKRSYRFEEAWTRYED
          F  AL++ EL+D+GY G+ FTW N RHG D V +RLDR + ++  F LF    + H+ F  SDH  L + L   Q+  Q   ++  +RFE  W + E 
Subjt:  RGFSNALNESELRDVGYNGSPFTWMNRRHGVDFVRKRLDRCLVNSDLFLLFHSIVVNHLDFLCSDHRPLEICLQDHQSPCQRRNRKRSYRFEEAWTRYED

Query:  CEEMIRRSWRQTHESNKVEDLMSNLKQTAVTLHTW
        CEE++RR+W+Q      +  +   +K   + L  W
Subjt:  CEEMIRRSWRQTHESNKVEDLMSNLKQTAVTLHTW

A0A2N9I5D8 Uncharacterized protein3.4e-4540.87Show/hide
Query:  MNRLKEFLSFKNVFVVNSRGLSGGLALFWSDDVEMQLLTYSKGHIDTIL-SYETKCFRFTGFYGEPDPLNRHVSWTLISRLKDFSNLPWVMAGDFNEILH
        M  ++  L F N  +V S G SGGLA+ W DDVE+ + +YS  HID+++ S ++  +RFTGFYG P+   ++ SW L+  L    +LPW+  GDFNEIL 
Subjt:  MNRLKEFLSFKNVFVVNSRGLSGGLALFWSDDVEMQLLTYSKGHIDTIL-SYETKCFRFTGFYGEPDPLNRHVSWTLISRLKDFSNLPWVMAGDFNEILH

Query:  EKERDGGREAVLSLSRGFSNALNESELRDVGYNGSPFTWMNRRHGVDFVRKRLDRCLVNSDLFLLFHSIVVNHLDFLCSDHRPLEICLQDHQSPCQRRNR
        + E+ G  +  L     F +ALN  +L D+GY+G  FTW N RHG   V++RLDR     +    FH  +V+++ +  SDH PL I      SP Q    
Subjt:  EKERDGGREAVLSLSRGFSNALNESELRDVGYNGSPFTWMNRRHGVDFVRKRLDRCLVNSDLFLLFHSIVVNHLDFLCSDHRPLEICLQDHQSPCQRRNR

Query:  KRSYRFEEAWTRYEDCEEMIRRSWRQTHESNKVE-DLMSNLKQTAVTLHTWG
        KR +RFEE W    +CEE+IR  W Q H S  +   L   +K+    L TWG
Subjt:  KRSYRFEEAWTRYEDCEEMIRRSWRQTHESNKVE-DLMSNLKQTAVTLHTWG

A0A2N9J3U0 Reverse transcriptase domain-containing protein2.5e-4339.57Show/hide
Query:  VNSRGLSGGLALFWSDDVEMQLLTYSKGHID-TILSYETKCFRFTGFYGEPDPLNRHVSWTLISRLKDFSNLPWVMAGDFNEILHEKERDGGREAVLSLS
        V   G  GGLAL W + +++  L++S  HID TI S  T  + FTGFYG PD   RH SWTL+ RLK + ++PW++ GDFNE+L   E+ G         
Subjt:  VNSRGLSGGLALFWSDDVEMQLLTYSKGHID-TILSYETKCFRFTGFYGEPDPLNRHVSWTLISRLKDFSNLPWVMAGDFNEILHEKERDGGREAVLSLS

Query:  RGFSNALNESELRDVGYNGSPFTWMNRRHGVDFVRKRLDRCLVNSDLFLLFHSIVVNHLDFLCSDHRPLEICLQDHQSPCQRRNRKRSYRFEEAWTRYED
          F  AL++ EL+D+GY G+ FTW N RHG D V +RLDR + ++  F LF    + H+ F  SDH  L + L   Q+  Q   ++  +RFE  W + E 
Subjt:  RGFSNALNESELRDVGYNGSPFTWMNRRHGVDFVRKRLDRCLVNSDLFLLFHSIVVNHLDFLCSDHRPLEICLQDHQSPCQRRNRKRSYRFEEAWTRYED

Query:  CEEMIRRSWRQTHESNKVEDLMSNLKQTAVTLHTW
        CEE++RR+W+Q      +  +   +K   + L  W
Subjt:  CEEMIRRSWRQTHESNKVEDLMSNLKQTAVTLHTW

A0A2N9J6Y2 Uncharacterized protein1.3e-4440Show/hide
Query:  FKNVFVVNSRGLSGGLALFWSDDVEMQLLTYSKGHIDTILSYETKCFRFTGFYGEPDPLNRHVSWTLISRLKDFSNLPWVMAGDFNEILHEKERDGGREA
        F   FVV SRG SGGLA FWS +V + + +YS+ HID I+ Y+   +R TGFYG P    + V W L+  L+    LPW+  GDFNE+LH +E+ G    
Subjt:  FKNVFVVNSRGLSGGLALFWSDDVEMQLLTYSKGHIDTILSYETKCFRFTGFYGEPDPLNRHVSWTLISRLKDFSNLPWVMAGDFNEILHEKERDGGREA

Query:  VLSLSRGFSNALNESELRDVGYNGSPFTWMNRRHGVDFVRKRLDRCLVNSDLFLLFHSIVVNHLDFLCSDHRPLEICLQDHQSPCQRRNRKRSYRFEEAW
          +  R F   ++E    D+G+ GSPFTW N++HG   V + LDRCL  ++  L F +  V HL  + SDHRPL + L    S    R R++ +RFEE W
Subjt:  VLSLSRGFSNALNESELRDVGYNGSPFTWMNRRHGVDFVRKRLDRCLVNSDLFLLFHSIVVNHLDFLCSDHRPLEICLQDHQSPCQRRNRKRSYRFEEAW

Query:  TRYEDCEEMIRRSWRQTHESNKVEDLMSNLKQTAVTLHTW
        T ++ CE+ IR +W   H    +  ++  +K +   L  W
Subjt:  TRYEDCEEMIRRSWRQTHESNKVEDLMSNLKQTAVTLHTW

A0A803PRV5 Uncharacterized protein1.1e-4642.06Show/hide
Query:  LKEFLSFKNVFVVNSRGLSGGLALFWSDDVEMQLLTYSKGHIDTILSYET-KCFRFTGFYGEPDPLNRHVSWTLISRLKDFSNLPWVMAGDFNEILHEKE
        L+  L F   F V +RG SGGL L WS D+E Q+L+YS+ HID+ +  E  + +RFTGFYG+PDP  R  SW L+ RL      PWV+ GDFNEIL +KE
Subjt:  LKEFLSFKNVFVVNSRGLSGGLALFWSDDVEMQLLTYSKGHIDTILSYET-KCFRFTGFYGEPDPLNRHVSWTLISRLKDFSNLPWVMAGDFNEILHEKE

Query:  RDGGREAVLSLSRGFSNALNESELRDVGYNGSPFTWMNRRHGVDFVRKRLDRCLVNSDLFLLFHSIVVNHLDFLCSDHRPLEICLQDHQSPCQRRNRKRS
        + GG      L   F  AL+  +LRDVGY G+ +TW N R   D + +RLDR   NSD F +F S+ V HLD   SDH PL +   D     Q   R R+
Subjt:  RDGGREAVLSLSRGFSNALNESELRDVGYNGSPFTWMNRRHGVDFVRKRLDRCLVNSDLFLLFHSIVVNHLDFLCSDHRPLEICLQDHQSPCQRRNRKRS

Query:  -YRFEEAWTRYEDCEEMIRRSWRQTHESNKVEDLMSNLKQTAVTLHTWGVIK
         + FE AW   E+C  +++ +W +  ++   + L + L Q  + L  W   K
Subjt:  -YRFEEAWTRYEDCEEMIRRSWRQTHESNKVEDLMSNLKQTAVTLHTWGVIK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein5.3e-0630.77Show/hide
Query:  VMAGDFNEILHEKERDGGREAVLSLSRG---FSNALNESELRDVGYNGSPFTWMNRRHGVDFVRKRLDRCLVNSDLFLLFHSIVVNHLDFLCSDHRPLEI
        ++ GDF++I    +     +  + + RG   F N L +S+L D+   G  +TW N +     +RK LDR + N D F  F S +        SDH P  I
Subjt:  VMAGDFNEILHEKERDGGREAVLSLSRG---FSNALNESELRDVGYNGSPFTWMNRRHGVDFVRKRLDRCLVNSDLFLLFHSIVVNHLDFLCSDHRPLEI

Query:  CLQD
         L++
Subjt:  CLQD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAGATTGAAAGAATTCTTGTCTTTTAAAAATGTATTTGTTGTTAACAGTAGAGGGTTGAGTGGTGGGCTAGCTTTGTTCTGGAGTGATGATGTTGAAATGCAGCT
GTTGACTTATTCGAAAGGCCACATTGATACAATTTTGAGTTATGAAACTAAATGTTTTCGTTTCACTGGCTTTTATGGGGAACCCGATCCACTGAATCGTCATGTCTCAT
GGACTTTAATTTCTCGATTAAAAGATTTCTCGAATCTACCGTGGGTAATGGCAGGAGATTTTAATGAAATTTTGCATGAGAAAGAAAGAGATGGTGGTCGTGAAGCAGTT
TTATCACTTAGTAGGGGCTTTTCTAATGCTCTTAACGAGAGTGAATTACGGGATGTAGGCTACAATGGGAGTCCTTTCACTTGGATGAATAGACGACATGGAGTTGATTT
TGTTAGAAAGCGTTTGGATCGCTGCTTGGTGAATTCTGACCTTTTTCTACTTTTCCACTCTATTGTTGTTAATCATCTTGACTTTTTATGCTCTGATCATAGACCTCTTG
AAATTTGTTTGCAGGATCACCAATCCCCTTGTCAAAGGAGAAATCGCAAACGCTCGTATAGATTCGAGGAGGCATGGACGAGATATGAGGATTGTGAGGAGATGATTAGA
AGGTCCTGGAGACAAACACATGAAAGTAACAAAGTGGAGGATCTAATGAGTAATCTTAAGCAAACGGCTGTTACTCTTCACACATGGGGCGTGATAAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATAGATTGAAAGAATTCTTGTCTTTTAAAAATGTATTTGTTGTTAACAGTAGAGGGTTGAGTGGTGGGCTAGCTTTGTTCTGGAGTGATGATGTTGAAATGCAGCT
GTTGACTTATTCGAAAGGCCACATTGATACAATTTTGAGTTATGAAACTAAATGTTTTCGTTTCACTGGCTTTTATGGGGAACCCGATCCACTGAATCGTCATGTCTCAT
GGACTTTAATTTCTCGATTAAAAGATTTCTCGAATCTACCGTGGGTAATGGCAGGAGATTTTAATGAAATTTTGCATGAGAAAGAAAGAGATGGTGGTCGTGAAGCAGTT
TTATCACTTAGTAGGGGCTTTTCTAATGCTCTTAACGAGAGTGAATTACGGGATGTAGGCTACAATGGGAGTCCTTTCACTTGGATGAATAGACGACATGGAGTTGATTT
TGTTAGAAAGCGTTTGGATCGCTGCTTGGTGAATTCTGACCTTTTTCTACTTTTCCACTCTATTGTTGTTAATCATCTTGACTTTTTATGCTCTGATCATAGACCTCTTG
AAATTTGTTTGCAGGATCACCAATCCCCTTGTCAAAGGAGAAATCGCAAACGCTCGTATAGATTCGAGGAGGCATGGACGAGATATGAGGATTGTGAGGAGATGATTAGA
AGGTCCTGGAGACAAACACATGAAAGTAACAAAGTGGAGGATCTAATGAGTAATCTTAAGCAAACGGCTGTTACTCTTCACACATGGGGCGTGATAAAGTAG
Protein sequenceShow/hide protein sequence
MNRLKEFLSFKNVFVVNSRGLSGGLALFWSDDVEMQLLTYSKGHIDTILSYETKCFRFTGFYGEPDPLNRHVSWTLISRLKDFSNLPWVMAGDFNEILHEKERDGGREAV
LSLSRGFSNALNESELRDVGYNGSPFTWMNRRHGVDFVRKRLDRCLVNSDLFLLFHSIVVNHLDFLCSDHRPLEICLQDHQSPCQRRNRKRSYRFEEAWTRYEDCEEMIR
RSWRQTHESNKVEDLMSNLKQTAVTLHTWGVIK