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Lag0031108 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031108
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationchr11:4886838..4888649
RNA-Seq ExpressionLag0031108
SyntenyLag0031108
Gene Ontology termsGO:0043170 - macromolecule metabolic process (biological process)
GO:0044237 - cellular metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW19920.1 Biotin synthase, mitochondrial [Vitis vinifera]8.3e-2942.79Show/hide
Query:  HENRPGRKKRPYRRQSVGLGGERPLGRLGNHRVLNEDAL---------LERERPFDEGIDWCPISDREKNDLDSPFSMEEIKKAVFDCDRDKAQ------
        H    GR+ R Y +  +   GE     L N  V++E+ +          E +    EGIDW PIS+     LD PFS EE++ AVF  +++KA       
Subjt:  HENRPGRKKRPYRRQSVGLGGERPLGRLGNHRVLNEDAL---------LERERPFDEGIDWCPISDREKNDLDSPFSMEEIKKAVFDCDRDKAQ------

Query:  -VQMDSPWPFFKTTGKRL------KGTWS--VEKVFSSTITEAQGAFIERRQILDQALIANEAIEDYRRSGQEGVVFKIDFEKAYDHVDWNFLDKILE-K
               W   K    R+      KG  S  + KV   TI  +QGAF+E RQILD  LIANE +++ RRSG+EGVVFKIDFEKAYDHV+W FLD +L+ K
Subjt:  -VQMDSPWPFFKTTGKRL------KGTWS--VEKVFSSTITEAQGAFIERRQILDQALIANEAIEDYRRSGQEGVVFKIDFEKAYDHVDWNFLDKILE-K

Query:  GFGYKWRS
        GF  KWRS
Subjt:  GFGYKWRS

RVW25035.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]8.3e-2945.31Show/hide
Query:  HENRPGRKKRPYRRQSVGLGGERPLGRLGNHRVLNEDALLERERPFD---------EGIDWCPISDREKNDLDSPFSMEEIKKAVFDCDRDKAQVQMDSP
        H+   GR+ R Y ++   L  ER L  L N   + E+ LL  E+ +          EG+DW PIS+     LDSPF+ EEI KA+F  DRDKA      P
Subjt:  HENRPGRKKRPYRRQSVGLGGERPLGRLGNHRVLNEDALLERERPFD---------EGIDWCPISDREKNDLDSPFSMEEIKKAVFDCDRDKAQVQMDSP

Query:  WPFFKTTGKRLKGTWSVEKVFSSTITEAQGAFIERRQILDQALIANEAIEDYRRSGQEGVVFKIDFEKAYDHVDWNFLDKILE-KGFGYKWR
         P   T    +   W +  V   TI   QGAF++ RQILD  LI +E +++ RRSG+EGVVFKIDFEKAYDH+ W+FLD +LE KGF  +WR
Subjt:  WPFFKTTGKRLKGTWSVEKVFSSTITEAQGAFIERRQILDQALIANEAIEDYRRSGQEGVVFKIDFEKAYDHVDWNFLDKILE-KGFGYKWR

RVW26445.1 putative ribonuclease H protein [Vitis vinifera]6.3e-2952.08Show/hide
Query:  EGIDWCPISDREKNDLDSPFSMEEIKKAVFDCDRDKAQ-------VQMDSPWPFFKTTGKRLKGTWSVEKVFSSTITEAQGAFIERRQILDQALIANEAI
        EGIDW PIS+   + LDSPF+  EI  A+F  DRDKA              W   K    RL+G      V   TI   QGAF++ RQILD  LIANE +
Subjt:  EGIDWCPISDREKNDLDSPFSMEEIKKAVFDCDRDKAQ-------VQMDSPWPFFKTTGKRLKGTWSVEKVFSSTITEAQGAFIERRQILDQALIANEAI

Query:  EDYRRSGQEGVVFKIDFEKAYDHVDWNFLDKILE-KGFGYKWRS
        ++ +RSG+EGVVFKIDFEKAYDHV W+FLD +LE KGF  +WRS
Subjt:  EDYRRSGQEGVVFKIDFEKAYDHVDWNFLDKILE-KGFGYKWRS

RVW40626.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]4.9e-2950.32Show/hide
Query:  EGIDWCPISDREKNDLDSPFSMEEIKKAVFDCDRDKAQVQMDSPWPFFKTTG-------------------KRLKGTWSVEKVFSSTITEAQGAFIERRQ
        EG+DW PIS+     LDSPF+ EEI KA+F  DRDKA  QM    P+ K+ G                   K L G   +  V   TI   QGAF++ RQ
Subjt:  EGIDWCPISDREKNDLDSPFSMEEIKKAVFDCDRDKAQVQMDSPWPFFKTTG-------------------KRLKGTWSVEKVFSSTITEAQGAFIERRQ

Query:  ILDQALIANEAIEDYRRSGQEGVVFKIDFEKAYDHVDWNFLDKILE-KGFGYKWR
        ILD  LIANE +++ RRSG+EGV+FKIDFEKAYDHV W+FLD +LE KGF  +WR
Subjt:  ILDQALIANEAIEDYRRSGQEGVVFKIDFEKAYDHVDWNFLDKILE-KGFGYKWR

RVW66522.1 putative ribonuclease H protein [Vitis vinifera]4.9e-2944.27Show/hide
Query:  HENRPGRKKRPYRRQSVGLGGERPLGRLGNHRVLNEDALLERERPFD---------EGIDWCPISDREKNDLDSPFSMEEIKKAVFDCDRDKAQVQMDSP
        H+   GR+ R Y ++   L  +R L  L N   + E+ LL  E+ +          EG+DW PIS+     LDSPF+ EEI KA+F  DRDKA    D  
Subjt:  HENRPGRKKRPYRRQSVGLGGERPLGRLGNHRVLNEDALLERERPFD---------EGIDWCPISDREKNDLDSPFSMEEIKKAVFDCDRDKAQVQMDSP

Query:  WPFFKTTGKRLKGTWSVEKVFSSTITEAQGAFIERRQILDQALIANEAIEDYRRSGQEGVVFKIDFEKAYDHVDWNFLDKILE-KGFGYKWR
           F+         W +  V   TI   QGAF++ RQILD  LI +E +++ RRSG+EGVVFKIDFEKAYDH+ W+FLD +LE KGF  +WR
Subjt:  WPFFKTTGKRLKGTWSVEKVFSSTITEAQGAFIERRQILDQALIANEAIEDYRRSGQEGVVFKIDFEKAYDHVDWNFLDKILE-KGFGYKWR

TrEMBL top hitse value%identityAlignment
A0A438C9K9 Biotin synthase, mitochondrial4.0e-2942.79Show/hide
Query:  HENRPGRKKRPYRRQSVGLGGERPLGRLGNHRVLNEDAL---------LERERPFDEGIDWCPISDREKNDLDSPFSMEEIKKAVFDCDRDKAQ------
        H    GR+ R Y +  +   GE     L N  V++E+ +          E +    EGIDW PIS+     LD PFS EE++ AVF  +++KA       
Subjt:  HENRPGRKKRPYRRQSVGLGGERPLGRLGNHRVLNEDAL---------LERERPFDEGIDWCPISDREKNDLDSPFSMEEIKKAVFDCDRDKAQ------

Query:  -VQMDSPWPFFKTTGKRL------KGTWS--VEKVFSSTITEAQGAFIERRQILDQALIANEAIEDYRRSGQEGVVFKIDFEKAYDHVDWNFLDKILE-K
               W   K    R+      KG  S  + KV   TI  +QGAF+E RQILD  LIANE +++ RRSG+EGVVFKIDFEKAYDHV+W FLD +L+ K
Subjt:  -VQMDSPWPFFKTTGKRL------KGTWS--VEKVFSSTITEAQGAFIERRQILDQALIANEAIEDYRRSGQEGVVFKIDFEKAYDHVDWNFLDKILE-K

Query:  GFGYKWRS
        GF  KWRS
Subjt:  GFGYKWRS

A0A438CP96 LINE-1 retrotransposable element ORF2 protein4.0e-2945.31Show/hide
Query:  HENRPGRKKRPYRRQSVGLGGERPLGRLGNHRVLNEDALLERERPFD---------EGIDWCPISDREKNDLDSPFSMEEIKKAVFDCDRDKAQVQMDSP
        H+   GR+ R Y ++   L  ER L  L N   + E+ LL  E+ +          EG+DW PIS+     LDSPF+ EEI KA+F  DRDKA      P
Subjt:  HENRPGRKKRPYRRQSVGLGGERPLGRLGNHRVLNEDALLERERPFD---------EGIDWCPISDREKNDLDSPFSMEEIKKAVFDCDRDKAQVQMDSP

Query:  WPFFKTTGKRLKGTWSVEKVFSSTITEAQGAFIERRQILDQALIANEAIEDYRRSGQEGVVFKIDFEKAYDHVDWNFLDKILE-KGFGYKWR
         P   T    +   W +  V   TI   QGAF++ RQILD  LI +E +++ RRSG+EGVVFKIDFEKAYDH+ W+FLD +LE KGF  +WR
Subjt:  WPFFKTTGKRLKGTWSVEKVFSSTITEAQGAFIERRQILDQALIANEAIEDYRRSGQEGVVFKIDFEKAYDHVDWNFLDKILE-KGFGYKWR

A0A438CTB1 Putative ribonuclease H protein3.1e-2952.08Show/hide
Query:  EGIDWCPISDREKNDLDSPFSMEEIKKAVFDCDRDKAQ-------VQMDSPWPFFKTTGKRLKGTWSVEKVFSSTITEAQGAFIERRQILDQALIANEAI
        EGIDW PIS+   + LDSPF+  EI  A+F  DRDKA              W   K    RL+G      V   TI   QGAF++ RQILD  LIANE +
Subjt:  EGIDWCPISDREKNDLDSPFSMEEIKKAVFDCDRDKAQ-------VQMDSPWPFFKTTGKRLKGTWSVEKVFSSTITEAQGAFIERRQILDQALIANEAI

Query:  EDYRRSGQEGVVFKIDFEKAYDHVDWNFLDKILE-KGFGYKWRS
        ++ +RSG+EGVVFKIDFEKAYDHV W+FLD +LE KGF  +WRS
Subjt:  EDYRRSGQEGVVFKIDFEKAYDHVDWNFLDKILE-KGFGYKWRS

A0A438DYN4 Transposon TX1 uncharacterized 149 kDa protein2.3e-2950.32Show/hide
Query:  EGIDWCPISDREKNDLDSPFSMEEIKKAVFDCDRDKAQVQMDSPWPFFKTTG-------------------KRLKGTWSVEKVFSSTITEAQGAFIERRQ
        EG+DW PIS+     LDSPF+ EEI KA+F  DRDKA  QM    P+ K+ G                   K L G   +  V   TI   QGAF++ RQ
Subjt:  EGIDWCPISDREKNDLDSPFSMEEIKKAVFDCDRDKAQVQMDSPWPFFKTTG-------------------KRLKGTWSVEKVFSSTITEAQGAFIERRQ

Query:  ILDQALIANEAIEDYRRSGQEGVVFKIDFEKAYDHVDWNFLDKILE-KGFGYKWR
        ILD  LIANE +++ RRSG+EGV+FKIDFEKAYDHV W+FLD +LE KGF  +WR
Subjt:  ILDQALIANEAIEDYRRSGQEGVVFKIDFEKAYDHVDWNFLDKILE-KGFGYKWR

A0A438G2V0 Putative ribonuclease H protein2.3e-2944.27Show/hide
Query:  HENRPGRKKRPYRRQSVGLGGERPLGRLGNHRVLNEDALLERERPFD---------EGIDWCPISDREKNDLDSPFSMEEIKKAVFDCDRDKAQVQMDSP
        H+   GR+ R Y ++   L  +R L  L N   + E+ LL  E+ +          EG+DW PIS+     LDSPF+ EEI KA+F  DRDKA    D  
Subjt:  HENRPGRKKRPYRRQSVGLGGERPLGRLGNHRVLNEDALLERERPFD---------EGIDWCPISDREKNDLDSPFSMEEIKKAVFDCDRDKAQVQMDSP

Query:  WPFFKTTGKRLKGTWSVEKVFSSTITEAQGAFIERRQILDQALIANEAIEDYRRSGQEGVVFKIDFEKAYDHVDWNFLDKILE-KGFGYKWR
           F+         W +  V   TI   QGAF++ RQILD  LI +E +++ RRSG+EGVVFKIDFEKAYDH+ W+FLD +LE KGF  +WR
Subjt:  WPFFKTTGKRLKGTWSVEKVFSSTITEAQGAFIERRQILDQALIANEAIEDYRRSGQEGVVFKIDFEKAYDHVDWNFLDKILE-KGFGYKWR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATTCGTGGTCGGAAAAGGGGCGACCTTCGAGAGATCCAATGAGACGATGGGGTGCCTGAGAAGATATGAAAAAATCTTACTTCAATTGCCATCTACAGCTAGGGG
TGTTCAAAATAACCACGAAAACCGACCCGGCCGAAAAAAACGACCGTACCGACGTCAGTCGGTCGGTTTAGGGGGAGAAAGGCCTCTAGGGAGGTTGGGGAATCATCGAG
TTCTAAATGAAGATGCTCTCTTGGAACGTGAGAGACCATTTGACGAAGGGATTGATTGGTGCCCAATCTCAGATAGGGAGAAAAACGATCTAGACTCTCCCTTCTCGATG
GAGGAAATCAAGAAAGCGGTCTTTGATTGTGATAGAGATAAAGCCCAGGTCCAAATGGATTCTCCATGGCCTTTTTTCAAGACAACTGGAAAGAGATTAAAGGGGACTTG
GAGCGTTGAAAAAGTTTTCTCCTCTACAATTACGGAGGCCCAAGGGGCTTTTATTGAACGAAGACAAATCTTGGATCAAGCCCTTATTGCTAACGAGGCTATCGAGGACT
ACCGAAGGAGTGGGCAGGAGGGAGTGGTTTTCAAGATCGATTTTGAGAAGGCGTATGATCATGTGGATTGGAACTTCTTGGATAAAATTCTGGAGAAAGGGTTTGGGTAC
AAGTGGAGATCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGATTCGTGGTCGGAAAAGGGGCGACCTTCGAGAGATCCAATGAGACGATGGGGTGCCTGAGAAGATATGAAAAAATCTTACTTCAATTGCCATCTACAGCTAGGGG
TGTTCAAAATAACCACGAAAACCGACCCGGCCGAAAAAAACGACCGTACCGACGTCAGTCGGTCGGTTTAGGGGGAGAAAGGCCTCTAGGGAGGTTGGGGAATCATCGAG
TTCTAAATGAAGATGCTCTCTTGGAACGTGAGAGACCATTTGACGAAGGGATTGATTGGTGCCCAATCTCAGATAGGGAGAAAAACGATCTAGACTCTCCCTTCTCGATG
GAGGAAATCAAGAAAGCGGTCTTTGATTGTGATAGAGATAAAGCCCAGGTCCAAATGGATTCTCCATGGCCTTTTTTCAAGACAACTGGAAAGAGATTAAAGGGGACTTG
GAGCGTTGAAAAAGTTTTCTCCTCTACAATTACGGAGGCCCAAGGGGCTTTTATTGAACGAAGACAAATCTTGGATCAAGCCCTTATTGCTAACGAGGCTATCGAGGACT
ACCGAAGGAGTGGGCAGGAGGGAGTGGTTTTCAAGATCGATTTTGAGAAGGCGTATGATCATGTGGATTGGAACTTCTTGGATAAAATTCTGGAGAAAGGGTTTGGGTAC
AAGTGGAGATCCTAG
Protein sequenceShow/hide protein sequence
MRFVVGKGATFERSNETMGCLRRYEKILLQLPSTARGVQNNHENRPGRKKRPYRRQSVGLGGERPLGRLGNHRVLNEDALLERERPFDEGIDWCPISDREKNDLDSPFSM
EEIKKAVFDCDRDKAQVQMDSPWPFFKTTGKRLKGTWSVEKVFSSTITEAQGAFIERRQILDQALIANEAIEDYRRSGQEGVVFKIDFEKAYDHVDWNFLDKILEKGFGY
KWRS