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Lag0031110 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031110
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionmethyl-CpG-binding domain-containing protein 13 isoform X1
Genome locationchr11:4917841..4918669
RNA-Seq ExpressionLag0031110
SyntenyLag0031110
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022140859.1 methyl-CpG-binding domain-containing protein 13 isoform X1 [Momordica charantia]1.2e-2382.19Show/hide
Query:  FYIDPVNGNALHSIRDVHRYLTTGKVCRLAYKLRNQRDSNIKFQHDDISASALKSPAVPKKEMQMIGKARRQI
        FYIDPV GNAL SIRDVHRYLTTGKV RLAYK RNQR+S ++FQ+DDIS SALKSPAV KKEM  IGKARRQI
Subjt:  FYIDPVNGNALHSIRDVHRYLTTGKVCRLAYKLRNQRDSNIKFQHDDISASALKSPAVPKKEMQMIGKARRQI

XP_022140860.1 methyl-CpG-binding domain-containing protein 13 isoform X2 [Momordica charantia]1.2e-2382.19Show/hide
Query:  FYIDPVNGNALHSIRDVHRYLTTGKVCRLAYKLRNQRDSNIKFQHDDISASALKSPAVPKKEMQMIGKARRQI
        FYIDPV GNAL SIRDVHRYLTTGKV RLAYK RNQR+S ++FQ+DDIS SALKSPAV KKEM  IGKARRQI
Subjt:  FYIDPVNGNALHSIRDVHRYLTTGKVCRLAYKLRNQRDSNIKFQHDDISASALKSPAVPKKEMQMIGKARRQI

XP_022140862.1 methyl-CpG-binding domain-containing protein 13 isoform X4 [Momordica charantia]1.2e-2382.19Show/hide
Query:  FYIDPVNGNALHSIRDVHRYLTTGKVCRLAYKLRNQRDSNIKFQHDDISASALKSPAVPKKEMQMIGKARRQI
        FYIDPV GNAL SIRDVHRYLTTGKV RLAYK RNQR+S ++FQ+DDIS SALKSPAV KKEM  IGKARRQI
Subjt:  FYIDPVNGNALHSIRDVHRYLTTGKVCRLAYKLRNQRDSNIKFQHDDISASALKSPAVPKKEMQMIGKARRQI

XP_038890261.1 methyl-CpG-binding domain-containing protein 13 isoform X1 [Benincasa hispida]3.3e-2179.17Show/hide
Query:  YIDPVNGNALHSIRDVHRYLTTGKVCRLAYKLRNQRDSNIKFQHDDISASALKSPAVPKKEMQMIGKARRQI
        YIDPV GNAL SIRDVHRYLT+GKV R A K R+QR+SNI+FQHD+ISAS LKSPAV KKEM  IGKARRQI
Subjt:  YIDPVNGNALHSIRDVHRYLTTGKVCRLAYKLRNQRDSNIKFQHDDISASALKSPAVPKKEMQMIGKARRQI

XP_038890398.1 methyl-CpG-binding domain-containing protein 13 isoform X3 [Benincasa hispida]3.3e-2179.17Show/hide
Query:  YIDPVNGNALHSIRDVHRYLTTGKVCRLAYKLRNQRDSNIKFQHDDISASALKSPAVPKKEMQMIGKARRQI
        YIDPV GNAL SIRDVHRYLT+GKV R A K R+QR+SNI+FQHD+ISAS LKSPAV KKEM  IGKARRQI
Subjt:  YIDPVNGNALHSIRDVHRYLTTGKVCRLAYKLRNQRDSNIKFQHDDISASALKSPAVPKKEMQMIGKARRQI

TrEMBL top hitse value%identityAlignment
A0A0A0L6H4 MBD domain-containing protein3.4e-1973.61Show/hide
Query:  YIDPVNGNALHSIRDVHRYLTTGKVCRLAYKLRNQRDSNIKFQHDDISASALKSPAVPKKEMQMIGKARRQI
        YIDPVNGNAL SIRDVHRYLT+GKV RL +K RNQRD+NI+FQHD+IS     SP V KKE+  IGKARRQI
Subjt:  YIDPVNGNALHSIRDVHRYLTTGKVCRLAYKLRNQRDSNIKFQHDDISASALKSPAVPKKEMQMIGKARRQI

A0A6J1CGC7 methyl-CpG-binding domain-containing protein 13 isoform X25.9e-2482.19Show/hide
Query:  FYIDPVNGNALHSIRDVHRYLTTGKVCRLAYKLRNQRDSNIKFQHDDISASALKSPAVPKKEMQMIGKARRQI
        FYIDPV GNAL SIRDVHRYLTTGKV RLAYK RNQR+S ++FQ+DDIS SALKSPAV KKEM  IGKARRQI
Subjt:  FYIDPVNGNALHSIRDVHRYLTTGKVCRLAYKLRNQRDSNIKFQHDDISASALKSPAVPKKEMQMIGKARRQI

A0A6J1CGY7 methyl-CpG-binding domain-containing protein 13 isoform X15.9e-2482.19Show/hide
Query:  FYIDPVNGNALHSIRDVHRYLTTGKVCRLAYKLRNQRDSNIKFQHDDISASALKSPAVPKKEMQMIGKARRQI
        FYIDPV GNAL SIRDVHRYLTTGKV RLAYK RNQR+S ++FQ+DDIS SALKSPAV KKEM  IGKARRQI
Subjt:  FYIDPVNGNALHSIRDVHRYLTTGKVCRLAYKLRNQRDSNIKFQHDDISASALKSPAVPKKEMQMIGKARRQI

A0A6J1CHA9 methyl-CpG-binding domain-containing protein 13 isoform X34.0e-2076.71Show/hide
Query:  FYIDPVNGNALHSIRDVHRYLTTGKVCRLAYKLRNQRDSNIKFQHDDISASALKSPAVPKKEMQMIGKARRQI
        FYIDPV GNAL SIRDVHRYLTTGKV RLAYK RNQR+S ++FQ+DDIS     SPAV KKEM  IGKARRQI
Subjt:  FYIDPVNGNALHSIRDVHRYLTTGKVCRLAYKLRNQRDSNIKFQHDDISASALKSPAVPKKEMQMIGKARRQI

A0A6J1CI95 methyl-CpG-binding domain-containing protein 13 isoform X45.9e-2482.19Show/hide
Query:  FYIDPVNGNALHSIRDVHRYLTTGKVCRLAYKLRNQRDSNIKFQHDDISASALKSPAVPKKEMQMIGKARRQI
        FYIDPV GNAL SIRDVHRYLTTGKV RLAYK RNQR+S ++FQ+DDIS SALKSPAV KKEM  IGKARRQI
Subjt:  FYIDPVNGNALHSIRDVHRYLTTGKVCRLAYKLRNQRDSNIKFQHDDISASALKSPAVPKKEMQMIGKARRQI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTTTTGTTTGCAGTTTTACATTGATCCTGTTAATGGAAATGCACTTCACTCGATAAGGGATGTACATCGGTATTTGACAACTGGAAAAGTGTGCCGGTTAGCATA
TAAATTAAGGAACCAGAGGGACAGCAATATCAAGTTTCAACATGATGATATCTCTGCAAGTGCTCTCAAGTCGCCTGCTGTCCCCAAGAAAGAGATGCAAATGATTGGCA
AAGCAAGGAGGCAAATCTATGGAGTGAGAGTTCATCAGAACCCAGTGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAACTTTTGTTTGCAGTTTTACATTGATCCTGTTAATGGAAATGCACTTCACTCGATAAGGGATGTACATCGGTATTTGACAACTGGAAAAGTGTGCCGGTTAGCATA
TAAATTAAGGAACCAGAGGGACAGCAATATCAAGTTTCAACATGATGATATCTCTGCAAGTGCTCTCAAGTCGCCTGCTGTCCCCAAGAAAGAGATGCAAATGATTGGCA
AAGCAAGGAGGCAAATCTATGGAGTGAGAGTTCATCAGAACCCAGTGAAATAA
Protein sequenceShow/hide protein sequence
MNFCLQFYIDPVNGNALHSIRDVHRYLTTGKVCRLAYKLRNQRDSNIKFQHDDISASALKSPAVPKKEMQMIGKARRQIYGVRVHQNPVK