| GenBank top hits | e value | %identity | Alignment |
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| KAA0048391.1 RNA polymerase sigma factor sigD [Cucumis melo var. makuwa] | 1.6e-209 | 86.01 | Show/hide |
Query: MATTGSLCSLPPQSPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPSPSETAVLAVEAAREHVLVEGRGVSEAWSFKTLERMEDSY
MATT SLCSLP QSPTLPSISLSSLP LKTHLPQQ HFPF PFS+K G NFIS DTL LP P E AVLAVEAA EHVLVE RG SE WS K +ERME+S
Subjt: MATTGSLCSLPPQSPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPSPSETAVLAVEAAREHVLVEGRGVSEAWSFKTLERMEDSY
Query: GDDGVVAWKKKRRKRRKEMGEKAEEDWVALSSGPLRPGYLSPKEEAVLCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCIDKILCRAKESR
DG VAWKKKRRKRRKE+G KAEE+W+ALSSGPLRPGYLSPKEEA LCLCLKEA LEK K+RIMETQEHEPTNKQLAIAMGTK GCID+ILCRA+ESR
Subjt: GDDGVVAWKKKRRKRRKEMGEKAEEDWVALSSGPLRPGYLSPKEEAVLCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCIDKILCRAKESR
Query: DRLIRCYSKLVISIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSR
DRLIRCYSKLVISIA+PYQGKGLSLQDLTQEGNIGLLKGAERFEP+RGHKLSTYAYWWIRQAIIRALDKKSRLVR+PGHMGQMVARIAE NNHLGIKLSR
Subjt: DRLIRCYSKLVISIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSR
Query: PPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMVIEKLMKQELKKLLDTLSKREAHILSLYFGLNGEIPQSFEEI
PPTN+E+AESL VRVSTVRLV ERS+RPIS++QP+ DR CLTLQEI+PGPDNLTPENMV+ KLMKQELK+LL+TLSKREAHILSLYFGLNGEIPQSFEEI
Subjt: PPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMVIEKLMKQELKKLLDTLSKREAHILSLYFGLNGEIPQSFEEI
Query: GKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
GKSLNLSRET+R+INIATLSKLKKT++LDY+KDYLV
Subjt: GKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
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| XP_004149725.1 RNA polymerase sigma factor sigD, chloroplastic [Cucumis sativus] | 9.3e-210 | 86.01 | Show/hide |
Query: MATTGSLCSLPPQSPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPSPSETAVLAVEAAREHVLVEGRGVSEAWSFKTLERMEDSY
MATT SLCSLP QSPTLPSISLSSLP LKTHLPQQ HFPF PFSTK G N ISNDTL LP P E AVLAVEAA EHVLVE +G SE WS K +E+ME+S
Subjt: MATTGSLCSLPPQSPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPSPSETAVLAVEAAREHVLVEGRGVSEAWSFKTLERMEDSY
Query: GDDGVVAWKKKRRKRRKEMGEKAEEDWVALSSGPLRPGYLSPKEEAVLCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCIDKILCRAKESR
DG VAWKKKRRKRRKE+G KAEE+W+ALSSGPLRPGYLSPKEEA LCLCLKEA LE KTRIMETQEHEPTNKQLAIAMGTK GCID+ILCRA+ESR
Subjt: GDDGVVAWKKKRRKRRKEMGEKAEEDWVALSSGPLRPGYLSPKEEAVLCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCIDKILCRAKESR
Query: DRLIRCYSKLVISIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSR
DRLIRCYSKLVISIA+PYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVR+PGHMGQMVARIAE NNHLGIKLSR
Subjt: DRLIRCYSKLVISIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSR
Query: PPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMVIEKLMKQELKKLLDTLSKREAHILSLYFGLNGEIPQSFEEI
PPTNKE+AESL V +ST+RLV ERS+RPIS++QP+ DR CLTLQEIMPGPDNLTPENMV+ KLMKQELK+LL+TLSKREA ILSLYFGLNGEIPQSFEEI
Subjt: PPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMVIEKLMKQELKKLLDTLSKREAHILSLYFGLNGEIPQSFEEI
Query: GKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
GKSLNLSRET+RQ NIATLSKLKKTD+LDYLKDYLV
Subjt: GKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
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| XP_008461821.1 PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Cucumis melo] | 1.3e-203 | 86.05 | Show/hide |
Query: SPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPSPSETAVLAVEAAREHVLVEGRGVSEAWSFKTLERMEDSYGDDGVVAWKKKRR
SPTLPSISLSSLP LKTHLPQQ HFPF PFS+K G NFIS DTL LP P E AVLAVEAA EHVLVE RG SE WS K +ERME+S DG VAWKKKRR
Subjt: SPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPSPSETAVLAVEAAREHVLVEGRGVSEAWSFKTLERMEDSYGDDGVVAWKKKRR
Query: KRRKEMGEKAEEDWVALSSGPLRPGYLSPKEEAVLCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCIDKILCRAKESRDRLIRCYSKLVIS
KRRKE+G KAEE+W+ALSSGPLRPGYLSPKEEA LCLCLKEA LEK K+RIMETQEHEPTNKQLAIAMGTK GCID+ILCRA+ESRDRLIRCYSKLVIS
Subjt: KRRKEMGEKAEEDWVALSSGPLRPGYLSPKEEAVLCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCIDKILCRAKESRDRLIRCYSKLVIS
Query: IASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSRPPTNKEIAESLNV
IA+PYQGKGLSLQDLTQEGNIGLLKGAERFEP+RGHKLSTYAYWWIRQAIIRALDKKSRLVR+PGHMGQMVARIAE NNHLGIKLSRPPTN+E+AESL V
Subjt: IASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSRPPTNKEIAESLNV
Query: RVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMVIEKLMKQELKKLLDTLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETVRQ
RVSTVRLV ERS+RPIS++QP+ DR CLTLQEI+PGPDNLTPENMV+ KLMKQELK+LL+TLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRET+R+
Subjt: RVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMVIEKLMKQELKKLLDTLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETVRQ
Query: INIATLSKLKKTDILDYLKDYLV
INIATLSKLKKT++LDY+KDYLV
Subjt: INIATLSKLKKTDILDYLKDYLV
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| XP_022152696.1 RNA polymerase sigma factor sigD, chloroplastic [Momordica charantia] | 8.1e-206 | 85.78 | Show/hide |
Query: MATTGSLCSLPPQSPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPSPSETAVLAVEAAREHVLVEGRGVSEAWSFKTLERMEDSY
MAT SLCSLP QSPTLPSISLSSLP LKTHLP QSHF F PFSTK GSNF N+T+A+ P ETAVLAVEAAREHVL E VSE WS LER+E+S
Subjt: MATTGSLCSLPPQSPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPSPSETAVLAVEAAREHVLVEGRGVSEAWSFKTLERMEDSY
Query: GDDGVVAWKKKRRKRRKEMGEKAEEDWVALSSGPLRPGYLSPKEEAVLCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCIDKILCRAKESR
GDDG V WKKKRRKRRKE+GEKAEE VALSSGPLRPGYL+PKEEA LCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIA GT L CID+ILCRAKESR
Subjt: GDDGVVAWKKKRRKRRKEMGEKAEEDWVALSSGPLRPGYLSPKEEAVLCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCIDKILCRAKESR
Query: DRLIRCYSKLVISIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSR
DRLI+CYSKLV+SIA+PYQGKGLSLQDLTQEGNIGLL GAERFEPNRGHKLSTYAYWWIRQAIIRALD KSRLVR+PGHMGQMVARIAEANNHLGIKLSR
Subjt: DRLIRCYSKLVISIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSR
Query: PPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMVIEKLMKQELKKLLDTLSKREAHILSLYFGLNGEIPQSFEEI
PT+KEIAESLNVRVSTV+LVTERS+RPISL+QP+TDRGCLTLQEIMPGPDNLTPENMV+ KLMKQEL++LL+TLSKREAHI+ LYFGLNGEIPQSFEEI
Subjt: PPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMVIEKLMKQELKKLLDTLSKREAHILSLYFGLNGEIPQSFEEI
Query: GKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
GKS+NLSRETVR++NIA LSKLKKTDILDYLKDY+V
Subjt: GKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
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| XP_038906215.1 RNA polymerase sigma factor sigD, chloroplastic [Benincasa hispida] | 3.6e-214 | 87.39 | Show/hide |
Query: MATTGSLCSLPPQSPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPSPSETAVLAVEAAREHVLVEGRGVSEAWSFKTLERMEDSY
MATT SLCSLP QSPTLPSISLSSLP LKTHLPQQ HFPF PFSTK G+NFI+NDTL LP P E AVL VEAAREHVLV+ RG SE WS K LERME S
Subjt: MATTGSLCSLPPQSPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPSPSETAVLAVEAAREHVLVEGRGVSEAWSFKTLERMEDSY
Query: GDDGVVAWKKKRRKRRKEMGEKAEEDWVALSSGPLRPGYLSPKEEAVLCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCIDKILCRAKESR
G DG VAWKKKRRKRRKE+G KAEE+W ALSSGPLRPGYLSPKEEA LCLCLKEAAQLE+AKTRIMETQEHEPTN+QLAIA+GTKLG ID+ILCRA+ESR
Subjt: GDDGVVAWKKKRRKRRKEMGEKAEEDWVALSSGPLRPGYLSPKEEAVLCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCIDKILCRAKESR
Query: DRLIRCYSKLVISIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSR
DRLIRCYSKLVISIA+PYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVR+PGHMGQMVARIAEANNHLG+KLSR
Subjt: DRLIRCYSKLVISIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSR
Query: PPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMVIEKLMKQELKKLLDTLSKREAHILSLYFGLNGEIPQSFEEI
PPT+KE+AESL VRVSTVRLVTERS+RPIS++QP+ DRGCLTLQEIMPGPDNLTPENMV+ KLMKQE+K+LL+TLSKREAHILSLYFGLNGEIP+SFEEI
Subjt: PPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMVIEKLMKQELKKLLDTLSKREAHILSLYFGLNGEIPQSFEEI
Query: GKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
GKSLNLSRET+RQIN+ATLSKLK TDILDYLK+YLV
Subjt: GKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0L9T0 Uncharacterized protein | 4.5e-210 | 86.01 | Show/hide |
Query: MATTGSLCSLPPQSPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPSPSETAVLAVEAAREHVLVEGRGVSEAWSFKTLERMEDSY
MATT SLCSLP QSPTLPSISLSSLP LKTHLPQQ HFPF PFSTK G N ISNDTL LP P E AVLAVEAA EHVLVE +G SE WS K +E+ME+S
Subjt: MATTGSLCSLPPQSPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPSPSETAVLAVEAAREHVLVEGRGVSEAWSFKTLERMEDSY
Query: GDDGVVAWKKKRRKRRKEMGEKAEEDWVALSSGPLRPGYLSPKEEAVLCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCIDKILCRAKESR
DG VAWKKKRRKRRKE+G KAEE+W+ALSSGPLRPGYLSPKEEA LCLCLKEA LE KTRIMETQEHEPTNKQLAIAMGTK GCID+ILCRA+ESR
Subjt: GDDGVVAWKKKRRKRRKEMGEKAEEDWVALSSGPLRPGYLSPKEEAVLCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCIDKILCRAKESR
Query: DRLIRCYSKLVISIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSR
DRLIRCYSKLVISIA+PYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVR+PGHMGQMVARIAE NNHLGIKLSR
Subjt: DRLIRCYSKLVISIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSR
Query: PPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMVIEKLMKQELKKLLDTLSKREAHILSLYFGLNGEIPQSFEEI
PPTNKE+AESL V +ST+RLV ERS+RPIS++QP+ DR CLTLQEIMPGPDNLTPENMV+ KLMKQELK+LL+TLSKREA ILSLYFGLNGEIPQSFEEI
Subjt: PPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMVIEKLMKQELKKLLDTLSKREAHILSLYFGLNGEIPQSFEEI
Query: GKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
GKSLNLSRET+RQ NIATLSKLKKTD+LDYLKDYLV
Subjt: GKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
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| A0A1S3CFL7 RNA polymerase sigma factor sigD, chloroplastic | 6.3e-204 | 86.05 | Show/hide |
Query: SPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPSPSETAVLAVEAAREHVLVEGRGVSEAWSFKTLERMEDSYGDDGVVAWKKKRR
SPTLPSISLSSLP LKTHLPQQ HFPF PFS+K G NFIS DTL LP P E AVLAVEAA EHVLVE RG SE WS K +ERME+S DG VAWKKKRR
Subjt: SPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPSPSETAVLAVEAAREHVLVEGRGVSEAWSFKTLERMEDSYGDDGVVAWKKKRR
Query: KRRKEMGEKAEEDWVALSSGPLRPGYLSPKEEAVLCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCIDKILCRAKESRDRLIRCYSKLVIS
KRRKE+G KAEE+W+ALSSGPLRPGYLSPKEEA LCLCLKEA LEK K+RIMETQEHEPTNKQLAIAMGTK GCID+ILCRA+ESRDRLIRCYSKLVIS
Subjt: KRRKEMGEKAEEDWVALSSGPLRPGYLSPKEEAVLCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCIDKILCRAKESRDRLIRCYSKLVIS
Query: IASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSRPPTNKEIAESLNV
IA+PYQGKGLSLQDLTQEGNIGLLKGAERFEP+RGHKLSTYAYWWIRQAIIRALDKKSRLVR+PGHMGQMVARIAE NNHLGIKLSRPPTN+E+AESL V
Subjt: IASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSRPPTNKEIAESLNV
Query: RVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMVIEKLMKQELKKLLDTLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETVRQ
RVSTVRLV ERS+RPIS++QP+ DR CLTLQEI+PGPDNLTPENMV+ KLMKQELK+LL+TLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRET+R+
Subjt: RVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMVIEKLMKQELKKLLDTLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETVRQ
Query: INIATLSKLKKTDILDYLKDYLV
INIATLSKLKKT++LDY+KDYLV
Subjt: INIATLSKLKKTDILDYLKDYLV
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| A0A5D3BP27 RNA polymerase sigma factor sigD | 7.6e-210 | 86.01 | Show/hide |
Query: MATTGSLCSLPPQSPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPSPSETAVLAVEAAREHVLVEGRGVSEAWSFKTLERMEDSY
MATT SLCSLP QSPTLPSISLSSLP LKTHLPQQ HFPF PFS+K G NFIS DTL LP P E AVLAVEAA EHVLVE RG SE WS K +ERME+S
Subjt: MATTGSLCSLPPQSPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPSPSETAVLAVEAAREHVLVEGRGVSEAWSFKTLERMEDSY
Query: GDDGVVAWKKKRRKRRKEMGEKAEEDWVALSSGPLRPGYLSPKEEAVLCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCIDKILCRAKESR
DG VAWKKKRRKRRKE+G KAEE+W+ALSSGPLRPGYLSPKEEA LCLCLKEA LEK K+RIMETQEHEPTNKQLAIAMGTK GCID+ILCRA+ESR
Subjt: GDDGVVAWKKKRRKRRKEMGEKAEEDWVALSSGPLRPGYLSPKEEAVLCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCIDKILCRAKESR
Query: DRLIRCYSKLVISIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSR
DRLIRCYSKLVISIA+PYQGKGLSLQDLTQEGNIGLLKGAERFEP+RGHKLSTYAYWWIRQAIIRALDKKSRLVR+PGHMGQMVARIAE NNHLGIKLSR
Subjt: DRLIRCYSKLVISIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSR
Query: PPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMVIEKLMKQELKKLLDTLSKREAHILSLYFGLNGEIPQSFEEI
PPTN+E+AESL VRVSTVRLV ERS+RPIS++QP+ DR CLTLQEI+PGPDNLTPENMV+ KLMKQELK+LL+TLSKREAHILSLYFGLNGEIPQSFEEI
Subjt: PPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMVIEKLMKQELKKLLDTLSKREAHILSLYFGLNGEIPQSFEEI
Query: GKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
GKSLNLSRET+R+INIATLSKLKKT++LDY+KDYLV
Subjt: GKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
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| A0A6J1DII5 RNA polymerase sigma factor sigD, chloroplastic | 3.9e-206 | 85.78 | Show/hide |
Query: MATTGSLCSLPPQSPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPSPSETAVLAVEAAREHVLVEGRGVSEAWSFKTLERMEDSY
MAT SLCSLP QSPTLPSISLSSLP LKTHLP QSHF F PFSTK GSNF N+T+A+ P ETAVLAVEAAREHVL E VSE WS LER+E+S
Subjt: MATTGSLCSLPPQSPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPSPSETAVLAVEAAREHVLVEGRGVSEAWSFKTLERMEDSY
Query: GDDGVVAWKKKRRKRRKEMGEKAEEDWVALSSGPLRPGYLSPKEEAVLCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCIDKILCRAKESR
GDDG V WKKKRRKRRKE+GEKAEE VALSSGPLRPGYL+PKEEA LCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIA GT L CID+ILCRAKESR
Subjt: GDDGVVAWKKKRRKRRKEMGEKAEEDWVALSSGPLRPGYLSPKEEAVLCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCIDKILCRAKESR
Query: DRLIRCYSKLVISIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSR
DRLI+CYSKLV+SIA+PYQGKGLSLQDLTQEGNIGLL GAERFEPNRGHKLSTYAYWWIRQAIIRALD KSRLVR+PGHMGQMVARIAEANNHLGIKLSR
Subjt: DRLIRCYSKLVISIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSR
Query: PPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMVIEKLMKQELKKLLDTLSKREAHILSLYFGLNGEIPQSFEEI
PT+KEIAESLNVRVSTV+LVTERS+RPISL+QP+TDRGCLTLQEIMPGPDNLTPENMV+ KLMKQEL++LL+TLSKREAHI+ LYFGLNGEIPQSFEEI
Subjt: PPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMVIEKLMKQELKKLLDTLSKREAHILSLYFGLNGEIPQSFEEI
Query: GKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
GKS+NLSRETVR++NIA LSKLKKTDILDYLKDY+V
Subjt: GKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
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| A0A6J1J3P0 RNA polymerase sigma factor sigD, chloroplastic | 1.7e-201 | 83.75 | Show/hide |
Query: MATTGSLCSLPPQSPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPSPSE-TAVLAVEAAREHVLVEGRGVSEAWSFKTLERMEDS
MATT SLCSLP QSPTLPSISLSSLP LKTHLPQQ HF SPFSTK NFISNDTL P PSE AVLAVEAAREHVLVE +S+ W K LE+ME S
Subjt: MATTGSLCSLPPQSPTLPSISLSSLPLLKTHLPQQSHFPFSPFSTKSGSNFISNDTLALPSPSE-TAVLAVEAAREHVLVEGRGVSEAWSFKTLERMEDS
Query: YGDDGVVAWKKKRRKRRKEMGEKAEEDWVALSSGPLRPGYLSPKEEAVLCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCIDKILCRAKES
G DG VAWKK+RRKRRKE+GE AEE+WVALSSGPLRPG+LS KEEA LCLCLKEAAQ+EK KTRIMETQ+HEPTNKQLAIAMGTKLG ID++L RA+ES
Subjt: YGDDGVVAWKKKRRKRRKEMGEKAEEDWVALSSGPLRPGYLSPKEEAVLCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCIDKILCRAKES
Query: RDRLIRCYSKLVISIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLS
RDRLIRCYSKLVISIA+PYQGKG+SLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQ II+ALDKKSRLVR+PGHMGQMVARIAEANNHLGIKLS
Subjt: RDRLIRCYSKLVISIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLS
Query: RPPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMVIEKLMKQELKKLLDTLSKREAHILSLYFGLNGEIPQSFEE
R PT+KE+A+ L V VSTVRLVTERS+RPIS+++P+ DRGCLTLQEIMPGPDNLTPENMVI KLMKQELK+LL TLSKREAHIL+LYFGLNG+IPQSFEE
Subjt: RPPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMVIEKLMKQELKKLLDTLSKREAHILSLYFGLNGEIPQSFEE
Query: IGKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
IGKSLNLSRET+RQ NIATL+KLKK++ILDYLKDYLV
Subjt: IGKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
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| SwissProt top hits | e value | %identity | Alignment |
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| O22056 RNA polymerase sigma factor sigB | 1.5e-48 | 36.03 | Show/hide |
Query: LSPKEEAVLCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCIDKILCRAKESRDRLIRCYSKLVISIASPYQGKGLSLQDLTQEGNIGLLKG
L+ +EE L +++ +LE+ +T + E +PT Q A A G + + + +D++I+ +LVISIA YQG G++LQDL QEG GL++G
Subjt: LSPKEEAVLCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCIDKILCRAKESRDRLIRCYSKLVISIASPYQGKGLSLQDLTQEGNIGLLKG
Query: AERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSRPPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRG
AE+F+ +G K STYA+WWI+QA+ ++L +SR++R+P HM + R+ EA L + + P N+EIAE+ + + + V + P SL Q I
Subjt: AERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSRPPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRG
Query: CLTLQEIMPGPDNLTPENMVIEKLMKQELKKLLDTLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
L E++ P+ +T E+++I++ M+Q+L K+LD+L RE ++ FG+ ++ +EIG+ + +SRE VRQI + KLK ++L+ YLV
Subjt: CLTLQEIMPGPDNLTPENMVIEKLMKQELKKLLDTLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
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| P26683 RNA polymerase sigma factor SigA | 4.5e-50 | 34.01 | Show/hide |
Query: ERMEDSYGDDGVVAWKKKRRKRRKEMGEK-AEEDWVALSSGPL-RPGYLSPKEEAVLCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCIDK
E +E +D + K + +RR + +K ED + L + R L EE L + + +LE+ + R+ E E +P + + A A+ L
Subjt: ERMEDSYGDDGVVAWKKKRRKRRKEMGEK-AEEDWVALSSGPL-RPGYLSPKEEAVLCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCIDK
Query: ILCRAKESRDRLIRCYSKLVISIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEAN
L + ++D++++ +LV+SIA Y +GLS QDL QEG++GL++ AE+F+ +G+K STYA WWIRQAI RA+ +SR +R+P H+ + ++RI +
Subjt: ILCRAKESRDRLIRCYSKLVISIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEAN
Query: NHLGIKLSRPPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMVIEKLMKQELKKLLDTLSKREAHILSLYFGLNG
L ++ R PT +EIA + + + +R + + ++ PISL PI L + + D TPE+ V + L++++L+K+LD+LS RE +L L +GL+
Subjt: NHLGIKLSRPPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMVIEKLMKQELKKLLDTLSKREAHILSLYFGLNG
Query: EIPQSFEEIGKSLNLSRETVRQINIATLSKLKKTDILDYLKDYL
++ EEIG+ N++RE +RQI L KL+ + LK+Y+
Subjt: EIPQSFEEIGKSLNLSRETVRQINIATLSKLKKTDILDYLKDYL
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| P38023 RNA polymerase sigma factor SigA1 | 5.9e-50 | 34.41 | Show/hide |
Query: EDSYGDDGVVAWKKKRRKRRKEMGEKAEEDWVALSSGPL-RPGYLSPKEEAVLCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCIDKILCR
EDS G+D A K K + R+ ED + L + R L EE L + + LE+ + ++E + P++ + A A+ + L + L R
Subjt: EDSYGDDGVVAWKKKRRKRRKEMGEKAEEDWVALSSGPL-RPGYLSPKEEAVLCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCIDKILCR
Query: AKESRDRLIRCYSKLVISIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLG
+ ++D++++ +LV+SIA Y +GLS QDL QEG++GL++ AE+F+ +G+K STYA WWIRQAI RA+ +SR +R+P H+ + ++RI + L
Subjt: AKESRDRLIRCYSKLVISIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLG
Query: IKLSRPPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMVIEKLMKQELKKLLDTLSKREAHILSLYFGLNGEIPQ
++ R PT +EIA + + + +R + + ++ PISL PI L + + D TPE+ V + L++++L+ +L TLS RE +L L +GL+ +
Subjt: IKLSRPPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMVIEKLMKQELKKLLDTLSKREAHILSLYFGLNGEIPQ
Query: SFEEIGKSLNLSRETVRQINIATLSKLKKTDILDYLKDYL
+ EEIG+ N++RE +RQI L KL+ + LK+Y+
Subjt: SFEEIGKSLNLSRETVRQINIATLSKLKKTDILDYLKDYL
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| Q9LD95 RNA polymerase sigma factor sigF, chloroplastic | 3.6e-47 | 34.67 | Show/hide |
Query: DDGVVAWKKKRRKRRKEMGEKAEEDWVALSSGPLRPGYLSPKEEAVLCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCIDKILCRAKESRD
D+G V K +K+ K+ G ++ GP L+ KEEA L ++ +LEK KT++ EPT + A AMG + + R + SR+
Subjt: DDGVVAWKKKRRKRRKEMGEKAEEDWVALSSGPLRPGYLSPKEEAVLCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCIDKILCRAKESRD
Query: RLIRCYSKLVISIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSRP
+LI +LV+ IA YQ +GL+ QDL QEG++GL+K E+F+P G + +TYAYWWIRQ+I +++ + SR +R+P ++ ++ +++EA + +
Subjt: RLIRCYSKLVISIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSRP
Query: PTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMVIEKLMKQELKKLLDTLSKREAHILSLYFGLNGEIPQSFEEIG
P+ +E+A + V + + +R P+S+ QPI T QEI P TP V ++LM+ ++ LL+ LS +E I+ L FG++G +S EIG
Subjt: PTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMVIEKLMKQELKKLLDTLSKREAHILSLYFGLNGEIPQSFEEIG
Query: KSLNLSRETVRQINIATLSKLKK
+ LS+E VRQ+ L +LK+
Subjt: KSLNLSRETVRQINIATLSKLKK
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| Q9ZSL6 RNA polymerase sigma factor sigD, chloroplastic | 9.3e-88 | 45.72 | Show/hide |
Query: TGSLCSLPPQSPTLPSISLSSLPLLK-THLPQQSHFPFSPFSTKSGSNFISNDTLALPSPSETAVLAVEAAREHVLVEGRGVSEAWSFKTLERMEDSYGD
T ++C PP +P+IS PLL+ TH Q S SPFS K + + DT T V+++ V+++ E W ++ +R
Subjt: TGSLCSLPPQSPTLPSISLSSLPLLK-THLPQQSHFPFSPFSTKSGSNFISNDTLALPSPSETAVLAVEAAREHVLVEGRGVSEAWSFKTLERMEDSYGD
Query: DGVVAWKKKRRKRR-----------KEMGEKAEEDWVALS-SGPLRPGYLSPKEEAVLCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCID
+K+RR+RR + G +AE + +++ G R G+LS EE LCL LKE A+LE T + +E+E + LA G K +
Subjt: DGVVAWKKKRRKRR-----------KEMGEKAEEDWVALS-SGPLRPGYLSPKEEAVLCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCID
Query: KILCRAKESRDRLIRCYSKLVISIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEA
+ILCR KE+R+++ RCY +LV+SIA+ YQGKGL+LQDL QEG+IGLL+GAERF+P+RG+KLSTY YWWI+QAI+RA+ KSRLV++PG M ++ A++AEA
Subjt: KILCRAKESRDRLIRCYSKLVISIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEA
Query: NNHLGIKLSRPPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMVIEKLMKQELKKLLDTLSKREAHILSLYFGLN
+N L KL R P+ +EIAE LN+ VS VRL ERSR P+SL + + G +TLQEI+ GPD PE MV + MK E+++LL +L+ RE+ +L LYFGLN
Subjt: NNHLGIKLSRPPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMVIEKLMKQELKKLLDTLSKREAHILSLYFGLN
Query: GEIPQSFEEIGKSLNLSRETVRQINIATLSKLKKTDILDYLKDY
GE P SFEEIGKSL LSRE VRQIN L KL+ ++ LK Y
Subjt: GEIPQSFEEIGKSLNLSRETVRQINIATLSKLKKTDILDYLKDY
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G08540.1 RNApolymerase sigma subunit 2 | 1.0e-49 | 36.03 | Show/hide |
Query: LSPKEEAVLCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCIDKILCRAKESRDRLIRCYSKLVISIASPYQGKGLSLQDLTQEGNIGLLKG
L+ +EE L +++ +LE+ +T + E +PT Q A A G + + + +D++I+ +LVISIA YQG G++LQDL QEG GL++G
Subjt: LSPKEEAVLCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCIDKILCRAKESRDRLIRCYSKLVISIASPYQGKGLSLQDLTQEGNIGLLKG
Query: AERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSRPPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRG
AE+F+ +G K STYA+WWI+QA+ ++L +SR++R+P HM + R+ EA L + + P N+EIAE+ + + + V + P SL Q I
Subjt: AERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSRPPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRG
Query: CLTLQEIMPGPDNLTPENMVIEKLMKQELKKLLDTLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
L E++ P+ +T E+++I++ M+Q+L K+LD+L RE ++ FG+ ++ +EIG+ + +SRE VRQI + KLK ++L+ YLV
Subjt: CLTLQEIMPGPDNLTPENMVIEKLMKQELKKLLDTLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETVRQINIATLSKLKKTDILDYLKDYLV
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| AT1G64860.1 sigma factor A | 2.9e-36 | 31.05 | Show/hide |
Query: VLVEGRGVSEAWSFKTLERMEDSYGDDGVVAWKK---------KRRKRRKEMGEKAEEDWVA----LSSGPLRPGY---------LSPKEEAVLCLCLKE
+L++ + ++W+ + + Y G + KK R+RR +K V +SSG GY LS E L +K
Subjt: VLVEGRGVSEAWSFKTLERMEDSYGDDGVVAWKK---------KRRKRRKEMGEKAEEDWVA----LSSGPLRPGY---------LSPKEEAVLCLCLKE
Query: AAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCIDKILCRAKESRDRLIRCYSKLVISIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTY
+L+ K+R+ + EP+++QLA+++ + L +R++L +LV+SIA Y G + DL Q G IGLL+G E+F+ ++G ++STY
Subjt: AAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCIDKILCRAKESRDRLIRCYSKLVISIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTY
Query: AYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSRPPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLT
YWWIRQ + RAL SR +R+P H+ + + I A L K P ++ IAESLN+ VR TE + SL DR +PG + +
Subjt: AYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSRPPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLT
Query: ----------PENMVIEKLMKQELKKLLD-TLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETVRQINIATLSKLK
P + + +K+E+ KL+ TL +RE I+ LY+GL+ E ++E+I K + LSRE VRQ+ + L KLK
Subjt: ----------PENMVIEKLMKQELKKLLD-TLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETVRQINIATLSKLK
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| AT1G64860.2 sigma factor A | 3.1e-30 | 29.64 | Show/hide |
Query: VLVEGRGVSEAWSFKTLERMEDSYGDDGVVAWKK---------KRRKRRKEMGEKAEEDWVA----LSSGPLRPGY---------LSPKEEAVLCLCLKE
+L++ + ++W+ + + Y G + KK R+RR +K V +SSG GY LS E L +K
Subjt: VLVEGRGVSEAWSFKTLERMEDSYGDDGVVAWKK---------KRRKRRKEMGEKAEEDWVA----LSSGPLRPGY---------LSPKEEAVLCLCLKE
Query: AAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCIDKILCRAKESRDRLIRCYSKLVISIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTY
+L+ K+R+ + EP+++QLA+++ + L +R++L +LV+SIA Y G + DL Q G IGLL+G E+F+ ++G ++STY
Subjt: AAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCIDKILCRAKESRDRLIRCYSKLVISIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTY
Query: AYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSRPPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLT
YWWIRQ + RAL SR +R+P H+ + + I A L K P ++ IAESLN+ VR TE + SL DR +PG + +
Subjt: AYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSRPPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLT
Query: ----------PENMVIEKLMKQELKKLLD-TLSKREAHILSLYFGLNGEIPQSFEEIGKSL
P + + +K+E+ KL+ TL +RE I+ LY+GL+ E ++E+I K +
Subjt: ----------PENMVIEKLMKQELKKLLD-TLSKREAHILSLYFGLNGEIPQSFEEIGKSL
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| AT2G36990.1 RNApolymerase sigma-subunit F | 2.5e-48 | 34.67 | Show/hide |
Query: DDGVVAWKKKRRKRRKEMGEKAEEDWVALSSGPLRPGYLSPKEEAVLCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCIDKILCRAKESRD
D+G V K +K+ K+ G ++ GP L+ KEEA L ++ +LEK KT++ EPT + A AMG + + R + SR+
Subjt: DDGVVAWKKKRRKRRKEMGEKAEEDWVALSSGPLRPGYLSPKEEAVLCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCIDKILCRAKESRD
Query: RLIRCYSKLVISIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSRP
+LI +LV+ IA YQ +GL+ QDL QEG++GL+K E+F+P G + +TYAYWWIRQ+I +++ + SR +R+P ++ ++ +++EA + +
Subjt: RLIRCYSKLVISIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEANNHLGIKLSRP
Query: PTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMVIEKLMKQELKKLLDTLSKREAHILSLYFGLNGEIPQSFEEIG
P+ +E+A + V + + +R P+S+ QPI T QEI P TP V ++LM+ ++ LL+ LS +E I+ L FG++G +S EIG
Subjt: PTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMVIEKLMKQELKKLLDTLSKREAHILSLYFGLNGEIPQSFEEIG
Query: KSLNLSRETVRQINIATLSKLKK
+ LS+E VRQ+ L +LK+
Subjt: KSLNLSRETVRQINIATLSKLKK
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| AT5G13730.1 sigma factor 4 | 6.6e-89 | 45.72 | Show/hide |
Query: TGSLCSLPPQSPTLPSISLSSLPLLK-THLPQQSHFPFSPFSTKSGSNFISNDTLALPSPSETAVLAVEAAREHVLVEGRGVSEAWSFKTLERMEDSYGD
T ++C PP +P+IS PLL+ TH Q S SPFS K + + DT T V+++ V+++ E W ++ +R
Subjt: TGSLCSLPPQSPTLPSISLSSLPLLK-THLPQQSHFPFSPFSTKSGSNFISNDTLALPSPSETAVLAVEAAREHVLVEGRGVSEAWSFKTLERMEDSYGD
Query: DGVVAWKKKRRKRR-----------KEMGEKAEEDWVALS-SGPLRPGYLSPKEEAVLCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCID
+K+RR+RR + G +AE + +++ G R G+LS EE LCL LKE A+LE T + +E+E + LA G K +
Subjt: DGVVAWKKKRRKRR-----------KEMGEKAEEDWVALS-SGPLRPGYLSPKEEAVLCLCLKEAAQLEKAKTRIMETQEHEPTNKQLAIAMGTKLGCID
Query: KILCRAKESRDRLIRCYSKLVISIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEA
+ILCR KE+R+++ RCY +LV+SIA+ YQGKGL+LQDL QEG+IGLL+GAERF+P+RG+KLSTY YWWI+QAI+RA+ KSRLV++PG M ++ A++AEA
Subjt: KILCRAKESRDRLIRCYSKLVISIASPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRMPGHMGQMVARIAEA
Query: NNHLGIKLSRPPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMVIEKLMKQELKKLLDTLSKREAHILSLYFGLN
+N L KL R P+ +EIAE LN+ VS VRL ERSR P+SL + + G +TLQEI+ GPD PE MV + MK E+++LL +L+ RE+ +L LYFGLN
Subjt: NNHLGIKLSRPPTNKEIAESLNVRVSTVRLVTERSRRPISLSQPITDRGCLTLQEIMPGPDNLTPENMVIEKLMKQELKKLLDTLSKREAHILSLYFGLN
Query: GEIPQSFEEIGKSLNLSRETVRQINIATLSKLKKTDILDYLKDY
GE P SFEEIGKSL LSRE VRQIN L KL+ ++ LK Y
Subjt: GEIPQSFEEIGKSLNLSRETVRQINIATLSKLKKTDILDYLKDY
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