; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0031141 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031141
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibosomal protein S21 family protein isoform 1
Genome locationchr11:5245427..5247443
RNA-Seq ExpressionLag0031141
SyntenyLag0031141
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001911 - Ribosomal protein S21


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581566.1 Cycloartenol-C-24-methyltransferase, partial [Cucurbita argyrosperma subsp. sororia]3.6e-4189.72Show/hide
Query:  MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRAKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKS
        MNSL+RN+SCSIRSS+H T+ LQHLH QQQQWRGIR KVLNGNLE+ALTFLQRKM+SSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLK+
Subjt:  MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRAKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKS

Query:  ILIKKVR
        ILIKKVR
Subjt:  ILIKKVR
XP_022151802.1 uncharacterized protein LOC111019699 [Momordica charantia]2.5e-4290Show/hide
Query:  MNSLARNISCSIRSSIHTTDS---LQHLHCQQQQWRGIRAKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK
        MNSLARN+SC IR SIHTTDS   LQ+LHCQQQQWRGIR KVLNGNLE+AL FLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK
Subjt:  MNSLARNISCSIRSSIHTTDS---LQHLHCQQQQWRGIRAKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK

Query:  LKSILIKKVR
        LK+ILIKKVR
Subjt:  LKSILIKKVR
XP_022934889.1 uncharacterized protein LOC111441929 [Cucurbita moschata]3.6e-4189.72Show/hide
Query:  MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRAKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKS
        MNSL+RN+SCSIRSS+H T+ LQHLH QQQQWRGIR KVLNGNLE+ALTFLQRKM+SSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLK+
Subjt:  MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRAKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKS

Query:  ILIKKVR
        ILIKKVR
Subjt:  ILIKKVR
XP_022966846.1 uncharacterized protein LOC111466431 [Cucurbita maxima]8.0e-4190.65Show/hide
Query:  MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRAKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKS
        MNSLARNISCSIRSSIH T S   LHC QQQWRGIR KVLNGNLE+A+TFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLK+
Subjt:  MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRAKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKS

Query:  ILIKKVR
        ILIKKVR
Subjt:  ILIKKVR
XP_022982723.1 uncharacterized protein LOC111481507 [Cucurbita maxima]4.7e-4189.72Show/hide
Query:  MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRAKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKS
        MNSL+RN+SCSIRSS+H T+ L+HLH QQQQWRGIR KVLNGNLE+ALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLK+
Subjt:  MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRAKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKS

Query:  ILIKKVR
        ILIKKVR
Subjt:  ILIKKVR
TrEMBL top hitse value%identityAlignment
A0A6J1DEG8 uncharacterized protein LOC1110196991.2e-4290Show/hide
Query:  MNSLARNISCSIRSSIHTTDS---LQHLHCQQQQWRGIRAKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK
        MNSLARN+SC IR SIHTTDS   LQ+LHCQQQQWRGIR KVLNGNLE+AL FLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK
Subjt:  MNSLARNISCSIRSSIHTTDS---LQHLHCQQQQWRGIRAKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK

Query:  LKSILIKKVR
        LK+ILIKKVR
Subjt:  LKSILIKKVR
A0A6J1F3V2 uncharacterized protein LOC1114419291.7e-4189.72Show/hide
Query:  MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRAKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKS
        MNSL+RN+SCSIRSS+H T+ LQHLH QQQQWRGIR KVLNGNLE+ALTFLQRKM+SSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLK+
Subjt:  MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRAKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKS

Query:  ILIKKVR
        ILIKKVR
Subjt:  ILIKKVR
A0A6J1G018 uncharacterized protein LOC1114494631.1e-4089.72Show/hide
Query:  MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRAKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKS
        MNSLARNISCSIRSSIH T S   LHC QQQWRGIR KVLNGNLE+A+TFLQRKM+SSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLK+
Subjt:  MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRAKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKS

Query:  ILIKKVR
        ILIKKVR
Subjt:  ILIKKVR
A0A6J1HQF3 uncharacterized protein LOC1114664313.9e-4190.65Show/hide
Query:  MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRAKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKS
        MNSLARNISCSIRSSIH T S   LHC QQQWRGIR KVLNGNLE+A+TFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLK+
Subjt:  MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRAKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKS

Query:  ILIKKVR
        ILIKKVR
Subjt:  ILIKKVR
A0A6J1J5L6 uncharacterized protein LOC1114815072.3e-4189.72Show/hide
Query:  MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRAKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKS
        MNSL+RN+SCSIRSS+H T+ L+HLH QQQQWRGIR KVLNGNLE+ALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLK+
Subjt:  MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRAKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKS

Query:  ILIKKVR
        ILIKKVR
Subjt:  ILIKKVR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G26360.1 Ribosomal protein S21 family protein1.9e-2461.68Show/hide
Query:  MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRAKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKS
        MN++A+ +     + + T  SL     Q QQ RGIR KV + +L++ALT LQ+KMQSSG+ERLIK  QTHHIKNSEK+VLARKNLER+I+S D ARKL+S
Subjt:  MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRAKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKS

Query:  ILIKKVR
        ILIKKVR
Subjt:  ILIKKVR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTCGTTGGCGCGGAACATATCATGCTCCATCAGGTCTTCGATTCACACCACTGACTCGCTACAGCACCTTCATTGTCAGCAGCAGCAATGGAGGGGAATCCGAGC
GAAGGTGCTGAACGGGAATCTAGAGCAGGCACTGACTTTTTTGCAAAGGAAGATGCAATCGAGCGGAATCGAGCGGCTGATTAAGCGTGAACAGACTCACCATATCAAGA
ATTCGGAGAAACGAGTTTTGGCCCGAAAGAATTTGGAGCGCAAAATTCGATCACAGGACCTCGCTCGCAAGCTCAAATCCATTCTCATAAAGAAAGTCAGGCCAGCGAGT
TTTGTTCAAAGACAAGGATCTACTGACCGAGTCGCCCTCGGGATTGAGCTGGAGGTGGATTGTACTAAAACCTGTAAGATTTCTATTCCTGATCAGGTTTATGGAAAATA
A
mRNA sequenceShow/hide mRNA sequence
ATGAACTCGTTGGCGCGGAACATATCATGCTCCATCAGGTCTTCGATTCACACCACTGACTCGCTACAGCACCTTCATTGTCAGCAGCAGCAATGGAGGGGAATCCGAGC
GAAGGTGCTGAACGGGAATCTAGAGCAGGCACTGACTTTTTTGCAAAGGAAGATGCAATCGAGCGGAATCGAGCGGCTGATTAAGCGTGAACAGACTCACCATATCAAGA
ATTCGGAGAAACGAGTTTTGGCCCGAAAGAATTTGGAGCGCAAAATTCGATCACAGGACCTCGCTCGCAAGCTCAAATCCATTCTCATAAAGAAAGTCAGGCCAGCGAGT
TTTGTTCAAAGACAAGGATCTACTGACCGAGTCGCCCTCGGGATTGAGCTGGAGGTGGATTGTACTAAAACCTGTAAGATTTCTATTCCTGATCAGGTTTATGGAAAATA
A
Protein sequenceShow/hide protein sequence
MNSLARNISCSIRSSIHTTDSLQHLHCQQQQWRGIRAKVLNGNLEQALTFLQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKSILIKKVRPAS
FVQRQGSTDRVALGIELEVDCTKTCKISIPDQVYGK