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Lag0031165 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031165
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr11:5465210..5465608
RNA-Seq ExpressionLag0031165
SyntenyLag0031165
Gene Ontology termsGO:0006139 - nucleobase-containing compound metabolic process (biological process)
GO:0016772 - transferase activity, transferring phosphorus-containing groups (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MBA0626496.1 hypothetical protein [Gossypium davidsonii]4.9e-0530.48Show/hide
Query:  WNIRVPY-VLEGPETTDHALFQCSCAREEWEILFPSGFRYFL--GQMDVKD--RWVRFSSDCEEELPLICVGAWAIWNDRNSSIHKRPFPDIGFRCSWIQ
        + +R  Y +L+G E  DH   +C  +   W  L    F  FL   Q D      WV FS+    +  + C   WAIW DRN+ +HK+          ++Q
Subjt:  WNIRVPY-VLEGPETTDHALFQCSCAREEWEILFPSGFRYFL--GQMDVKD--RWVRFSSDCEEELPLICVGAWAIWNDRNSSIHKRPFPDIGFRCSWIQ

Query:  EYLAE
         Y+ E
Subjt:  EYLAE

XP_022145060.1 uncharacterized protein LOC111014578 [Momordica charantia]3.2e-1239Show/hide
Query:  ETTDHALFQCSCAREEWEILFPSGFRYFLGQMDVKDRWVRF-SSDCEEELPLICVGAWAIWNDRNSSIHKRPFPDIGFRCSWIQEYLAEYAKANTPCGGE
        ETTDHALF+C  A+E W IL P  F        V+D  +    S    +  L+ VG WAIWNDRN+   +R  PD   R  WI  Y+ ++   + P  G+
Subjt:  ETTDHALFQCSCAREEWEILFPSGFRYFLGQMDVKDRWVRF-SSDCEEELPLICVGAWAIWNDRNSSIHKRPFPDIGFRCSWIQEYLAEYAKANTPCGGE

XP_023876296.1 uncharacterized protein LOC111988743 [Quercus suber]2.9e-0532Show/hide
Query:  LEGPETTDHALFQCSCAREEWEILFPSGFRYFLGQMDV----KDRWVRFSSDCEEELPLICVGAWAIWNDRNSSIHKRPFPDIGFRCSWIQEYLAEYAKA
        L   ET  HAL+ C+ AR+ W        ++  GQ DV     +  +R ++D   E  L  V AW IWN RN+ +H+    D  +     +EYL+E+ ++
Subjt:  LEGPETTDHALFQCSCAREEWEILFPSGFRYFLGQMDV----KDRWVRFSSDCEEELPLICVGAWAIWNDRNSSIHKRPFPDIGFRCSWIQEYLAEYAKA

XP_030930585.1 uncharacterized protein LOC115956305 [Quercus lobata]2.9e-0532.11Show/hide
Query:  PYVLEGPETTDHALFQCSCAREEW----EILFPSGFRYFLGQMDVKDRWVRFSSDCE-EELPLICVGAWAIWNDRNSSIHKRPFPDIGFRCSWIQEYLAE
        P  L  PE+  HAL+ C  AR+ W    +IL   G     G +D+           E  +L ++ V AW IWN RN  +H   F D G+  +   E L E
Subjt:  PYVLEGPETTDHALFQCSCAREEW----EILFPSGFRYFLGQMDVKDRWVRFSSDCE-EELPLICVGAWAIWNDRNSSIHKRPFPDIGFRCSWIQEYLAE

Query:  YAKANTPCG
        +  A+   G
Subjt:  YAKANTPCG

XP_030939716.1 uncharacterized protein LOC115964569 [Quercus lobata]2.9e-0531.13Show/hide
Query:  LEGPETTDHALFQCSCAREEW----EILFPSGFRYFLGQMDVKDRWVRFSSDCE-EELPLICVGAWAIWNDRNSSIHKRPFPDIGFRCSWIQEYLAEYAK
        L  PE+  HAL++C  AR+ W    +IL   G     G +D+           E +++ ++ V AW IWN RN  +H   F D G+  +  +E+L E+  
Subjt:  LEGPETTDHALFQCSCAREEW----EILFPSGFRYFLGQMDVKDRWVRFSSDCE-EELPLICVGAWAIWNDRNSSIHKRPFPDIGFRCSWIQEYLAEYAK

Query:  ANTPCG
        A+   G
Subjt:  ANTPCG

TrEMBL top hitse value%identityAlignment
A0A5A7VQ24 Adenylate kinase1.1e-0527.36Show/hide
Query:  PYVLEGPETTDHALFQCSCAREEWEILFP---SGFRYFLGQMDVKDRWVRFSSDCEE-ELPLICVGAWAIWNDRNSSIHKRPFPDIGFRCSWIQEYLAEY
        PY  + PET    +F C  A+E W+   P   SG  Y+    D  D  V  +      +  L C+G W +W+D N         D+  +C W+  Y+   
Subjt:  PYVLEGPETTDHALFQCSCAREEWEILFP---SGFRYFLGQMDVKDRWVRFSSDCEE-ELPLICVGAWAIWNDRNSSIHKRPFPDIGFRCSWIQEYLAEY

Query:  AKANTP
           ++P
Subjt:  AKANTP

A0A5B6WFI9 Reverse transcriptase6.9e-0531.68Show/hide
Query:  NIRVPYVLEGPETTDHALFQCSCAREEWEILFPSGFRYFLGQMDVKDRWVR--FSSDCEEELPLICVGAWAIWNDRNSSIHKRPFPDIGFRCSWIQEYLA
        NI  P      ETT+H   +C  ++  W+ L    F +     D+ D W+   F+S   E+  L C   WAIW DRNS IH++         ++++ YL 
Subjt:  NIRVPYVLEGPETTDHALFQCSCAREEWEILFPSGFRYFLGQMDVKDRWVR--FSSDCEEELPLICVGAWAIWNDRNSSIHKRPFPDIGFRCSWIQEYLA

Query:  E
        E
Subjt:  E

A0A5B6WIV8 Zinc finger, CCHC-type4.1e-0534.34Show/hide
Query:  EGPETTDHALFQCSCAREEWEILFPSGFRYFLGQMDVK-DRWVRFSSDCEE----ELPLICVGAWAIWNDRNSSIHKRPF---PDIGFRCSWIQEYLAE
        E  ET DH   +C    E W IL    F+  +G  D   ++W+ +   CE+       + C   WAIW DRNS +H +     P+IG   ++I+ YLAE
Subjt:  EGPETTDHALFQCSCAREEWEILFPSGFRYFLGQMDVK-DRWVRFSSDCEE----ELPLICVGAWAIWNDRNSSIHKRPF---PDIGFRCSWIQEYLAE

A0A6J1CTE3 uncharacterized protein LOC1110145781.5e-1239Show/hide
Query:  ETTDHALFQCSCAREEWEILFPSGFRYFLGQMDVKDRWVRF-SSDCEEELPLICVGAWAIWNDRNSSIHKRPFPDIGFRCSWIQEYLAEYAKANTPCGGE
        ETTDHALF+C  A+E W IL P  F        V+D  +    S    +  L+ VG WAIWNDRN+   +R  PD   R  WI  Y+ ++   + P  G+
Subjt:  ETTDHALFQCSCAREEWEILFPSGFRYFLGQMDVKDRWVRF-SSDCEEELPLICVGAWAIWNDRNSSIHKRPFPDIGFRCSWIQEYLAEYAKANTPCGGE

A0A7J9FSR2 Uncharacterized protein5.3e-0532.99Show/hide
Query:  GPETTDHALFQCSCAREEWEILFPSGFRYFL--GQMDVKD--RWVRFSSDCEEELPLICVGAWAIWNDRNSSIHK---RPFPDIGFRCSWIQEYLAE
        GPE TDH   +C  + E W  L    +   L   QM+      WV FS     +  + C   WAIW DRN+ +HK   +   +IG    ++Q Y+ E
Subjt:  GPETTDHALFQCSCAREEWEILFPSGFRYFL--GQMDVKD--RWVRFSSDCEEELPLICVGAWAIWNDRNSSIHK---RPFPDIGFRCSWIQEYLAE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTATTCCGACTATGGCCAACCTTGGGCATCACCATGTCTCGGTGGAACATACGTGTCCCATATGTTTTAGAAGGGCCAGAGACTACCGATCATGCACTATTTCAATG
CTCTTGTGCTAGGGAGGAATGGGAAATCTTATTTCCTAGTGGATTTCGGTATTTTCTAGGACAAATGGATGTGAAGGATAGGTGGGTGAGATTTAGTAGTGATTGTGAAG
AGGAGTTGCCTCTTATATGCGTGGGTGCATGGGCGATATGGAACGACCGAAATTCTAGCATTCATAAGCGTCCATTTCCGGATATTGGGTTTCGATGTTCATGGATTCAA
GAGTATTTGGCCGAATATGCAAAAGCCAATACCCCTTGTGGTGGGGAAAACTCACATTTTTCAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTATTCCGACTATGGCCAACCTTGGGCATCACCATGTCTCGGTGGAACATACGTGTCCCATATGTTTTAGAAGGGCCAGAGACTACCGATCATGCACTATTTCAATG
CTCTTGTGCTAGGGAGGAATGGGAAATCTTATTTCCTAGTGGATTTCGGTATTTTCTAGGACAAATGGATGTGAAGGATAGGTGGGTGAGATTTAGTAGTGATTGTGAAG
AGGAGTTGCCTCTTATATGCGTGGGTGCATGGGCGATATGGAACGACCGAAATTCTAGCATTCATAAGCGTCCATTTCCGGATATTGGGTTTCGATGTTCATGGATTCAA
GAGTATTTGGCCGAATATGCAAAAGCCAATACCCCTTGTGGTGGGGAAAACTCACATTTTTCAGAATGA
Protein sequenceShow/hide protein sequence
MLFRLWPTLGITMSRWNIRVPYVLEGPETTDHALFQCSCAREEWEILFPSGFRYFLGQMDVKDRWVRFSSDCEEELPLICVGAWAIWNDRNSSIHKRPFPDIGFRCSWIQ
EYLAEYAKANTPCGGENSHFSE