; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0031237 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031237
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr11:6083975..6087461
RNA-Seq ExpressionLag0031237
SyntenyLag0031237
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036008.1 Retrotransposon gag protein [Cucumis melo var. makuwa]9.8e-3368Show/hide
Query:  EEVDNSKKSEQRTSVFDRIKPPTIRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRD
        EEVDNS + +QRTSVFDRIKP T R  VFQR+SMA  EEENQC MST  R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M + + K F E N D
Subjt:  EEVDNSKKSEQRTSVFDRIKPPTIRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRD

Query:  KKLHSSVPSRMKRKFSVLITTEGSL
         K+HS VPSRMKRK SV I TEGSL
Subjt:  KKLHSSVPSRMKRKFSVLITTEGSL

KAA0044978.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.4e-3368.8Show/hide
Query:  EEVDNSKKSEQRTSVFDRIKPPTIRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRD
        EEVDNS + +QRTSVFDRIKP T R SVFQR+SMA  EEENQC  ST  R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D
Subjt:  EEVDNSKKSEQRTSVFDRIKPPTIRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRD

Query:  KKLHSSVPSRMKRKFSVLITTEGSL
         K+HS VPSRMKRK SV I TEGSL
Subjt:  KKLHSSVPSRMKRKFSVLITTEGSL

KAA0050736.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.7e-3267.2Show/hide
Query:  EEVDNSKKSEQRTSVFDRIKPPTIRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRD
        EEVDNS + +QRTSVFDRIKP T R SVFQR+SMA  EEENQC MST TR SAF+RLS+S SKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D
Subjt:  EEVDNSKKSEQRTSVFDRIKPPTIRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRD

Query:  KKLHSSVPSRMKRKFSVLITTEGSL
         K++S VPSR+KRK S+ I TEGSL
Subjt:  KKLHSSVPSRMKRKFSVLITTEGSL

KAA0055462.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.2e-3267.2Show/hide
Query:  EEVDNSKKSEQRTSVFDRIKPPTIRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRD
        EEVDNS + +QRTSVFDRIKP T R SVFQR+SMA  EE+NQC  ST  R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D
Subjt:  EEVDNSKKSEQRTSVFDRIKPPTIRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRD

Query:  KKLHSSVPSRMKRKFSVLITTEGSL
         K+H+ VPSRMKRK SV I TEGSL
Subjt:  KKLHSSVPSRMKRKFSVLITTEGSL

TYK08944.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.2e-3267.2Show/hide
Query:  EEVDNSKKSEQRTSVFDRIKPPTIRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRD
        EEVDNS + +QRTSVFDRIKP T R SVFQR+SMA  EE+NQC  ST  R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D
Subjt:  EEVDNSKKSEQRTSVFDRIKPPTIRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRD

Query:  KKLHSSVPSRMKRKFSVLITTEGSL
         K+H+ VPSRMKRK SV I TEGSL
Subjt:  KKLHSSVPSRMKRKFSVLITTEGSL

TrEMBL top hitse value%identityAlignment
A0A5A7SZJ7 Retrotransposon gag protein4.8e-3368Show/hide
Query:  EEVDNSKKSEQRTSVFDRIKPPTIRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRD
        EEVDNS + +QRTSVFDRIKP T R  VFQR+SMA  EEENQC MST  R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M + + K F E N D
Subjt:  EEVDNSKKSEQRTSVFDRIKPPTIRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRD

Query:  KKLHSSVPSRMKRKFSVLITTEGSL
         K+HS VPSRMKRK SV I TEGSL
Subjt:  KKLHSSVPSRMKRKFSVLITTEGSL

A0A5A7TQ06 Retrotransposon gag protein1.6e-3368.8Show/hide
Query:  EEVDNSKKSEQRTSVFDRIKPPTIRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRD
        EEVDNS + +QRTSVFDRIKP T R SVFQR+SMA  EEENQC  ST  R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D
Subjt:  EEVDNSKKSEQRTSVFDRIKPPTIRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRD

Query:  KKLHSSVPSRMKRKFSVLITTEGSL
         K+HS VPSRMKRK SV I TEGSL
Subjt:  KKLHSSVPSRMKRKFSVLITTEGSL

A0A5A7U974 Retrotransposon gag protein8.1e-3367.2Show/hide
Query:  EEVDNSKKSEQRTSVFDRIKPPTIRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRD
        EEVDNS + +QRTSVFDRIKP T R SVFQR+SMA  EEENQC MST TR SAF+RLS+S SKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D
Subjt:  EEVDNSKKSEQRTSVFDRIKPPTIRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRD

Query:  KKLHSSVPSRMKRKFSVLITTEGSL
         K++S VPSR+KRK S+ I TEGSL
Subjt:  KKLHSSVPSRMKRKFSVLITTEGSL

A0A5A7UI09 Retrotransposon gag protein1.1e-3267.2Show/hide
Query:  EEVDNSKKSEQRTSVFDRIKPPTIRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRD
        EEVDNS + +QRTSVFDRIKP T R SVFQR+SMA  EE+NQC  ST  R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D
Subjt:  EEVDNSKKSEQRTSVFDRIKPPTIRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRD

Query:  KKLHSSVPSRMKRKFSVLITTEGSL
         K+H+ VPSRMKRK SV I TEGSL
Subjt:  KKLHSSVPSRMKRKFSVLITTEGSL

A0A5D3BBF9 Gag protease polyprotein1.1e-3267.2Show/hide
Query:  EEVDNSKKSEQRTSVFDRIKPPTIRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRD
        EEVDNS + +QRTS+FDRIKP T R  VFQR+SMA  EEENQC  ST  R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D
Subjt:  EEVDNSKKSEQRTSVFDRIKPPTIRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRD

Query:  KKLHSSVPSRMKRKFSVLITTEGSL
         K+HS VPSRMKRK SV I TEGSL
Subjt:  KKLHSSVPSRMKRKFSVLITTEGSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAATAAATCCTTCTCCAAAACTTTCCACAAAAAGACAAAAGAGAACCTTGCAACTTCCTACTGCATCGACGTAGAAGAAGTTGACAATTCCAAGAAAAGTGAACA
AAGGACTTCTGTCTTCGATCGCATCAAGCCTCCAACTATTCGTCCTTCAGTATTCCAAAGAATGAGTATGGCCGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCT
CCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCAACCTTCAACATCTGTTTTTGATCGCCTCAAAGTAACAAGCGATCAACCTAAAAGA
AAAATGGACAACTTGGAGGTGAAACTTTTCGATGAAGTAAACCGCGACAAGAAGCTTCATAGTAGCGTCCCGTCACGTATGAAGAGGAAATTCTCTGTTCTCATAACTAC
AGAAGGTTCCTTGAAGTTCCTTCTCTCCAAGTTCGAGGGTCTTTACACTGTACGTTATTGCGTTGTTCCTTCTCCAAGTTCGAAGGTTCTTCATTGTATCCTGCTGCGTT
GTTCCTTCTCCAAGTTCGAGGGTTCTCAGTTGTACAACTGCTACGTTGTTCCTCCTCCAAGTGCGAATGATCTTATGTGGTGCGTTGTTGCATTGTTCCCTCTTCTCTCA
AGTTCGATGGTTCTCACGCAGCTTTGCTGGAGTTTCTTCTCCCCAAGTTCGAAGGTTCTCACGCCCTCTGTTGCAGTTCCTTCTTTCCAAGGTCGAAGGTTCTCACTCGC
TGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACACACTTCGCTCCAGTTCCTTCTCCCAAATTCGAAGGTTCTCATGCGCTTCGCGCTGCAGTTCCTTCCCTCCA
AGTTTGAAGGTTCTCACATCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACGCGCTTCGCCACAGTTCTCCTTCCTCCAAGTTCGAAGTTCCTTCCCCCC
AAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGTTCCGCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTT
CGAAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGTTGCTCCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGG
TTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCCTCTCTCCACTGTTCCTTCCTCCAAGTTGAAGGTTCTCATGCGCTTCGTTGCTACCTTCCTCCAA
GTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGC
TCCTTCTTCAAGTTCGAAGGCGCTTCTCTCCACTACTCCTTCTCCAAGTTCGAAGGCGTTTCTCTCCAGCTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCT
CCTTCTCCAAGTTCGAAGGCGCTTCTCTCTACTGCTCCTTCTCCAAGTTCGAAGGTGGTGAAATCACTGCAAGTGAAAAGCTGATGACGACCGTGGTGACCACCCCTGCA
GGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAAGCTGATGACGACCATGGTGGTGAAATCACTGCAAGTGAAAAGCTGATGAC
GACCGTGGTGACCACCCCTGCAATAAACTACAGTCATCAAAGTGACTGGTCTAGACAGACAGGTGGTGAAATCACTGCAAGTGAAAAGCTGATGACGACCGTGGTGACCA
CCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGATCGTGGTGACCACCCCTGCAGGAAACTACAGT
CATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGGGGAGTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAATAAATCCTTCTCCAAAACTTTCCACAAAAAGACAAAAGAGAACCTTGCAACTTCCTACTGCATCGACGTAGAAGAAGTTGACAATTCCAAGAAAAGTGAACA
AAGGACTTCTGTCTTCGATCGCATCAAGCCTCCAACTATTCGTCCTTCAGTATTCCAAAGAATGAGTATGGCCGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCT
CCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCAACCTTCAACATCTGTTTTTGATCGCCTCAAAGTAACAAGCGATCAACCTAAAAGA
AAAATGGACAACTTGGAGGTGAAACTTTTCGATGAAGTAAACCGCGACAAGAAGCTTCATAGTAGCGTCCCGTCACGTATGAAGAGGAAATTCTCTGTTCTCATAACTAC
AGAAGGTTCCTTGAAGTTCCTTCTCTCCAAGTTCGAGGGTCTTTACACTGTACGTTATTGCGTTGTTCCTTCTCCAAGTTCGAAGGTTCTTCATTGTATCCTGCTGCGTT
GTTCCTTCTCCAAGTTCGAGGGTTCTCAGTTGTACAACTGCTACGTTGTTCCTCCTCCAAGTGCGAATGATCTTATGTGGTGCGTTGTTGCATTGTTCCCTCTTCTCTCA
AGTTCGATGGTTCTCACGCAGCTTTGCTGGAGTTTCTTCTCCCCAAGTTCGAAGGTTCTCACGCCCTCTGTTGCAGTTCCTTCTTTCCAAGGTCGAAGGTTCTCACTCGC
TGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACACACTTCGCTCCAGTTCCTTCTCCCAAATTCGAAGGTTCTCATGCGCTTCGCGCTGCAGTTCCTTCCCTCCA
AGTTTGAAGGTTCTCACATCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACGCGCTTCGCCACAGTTCTCCTTCCTCCAAGTTCGAAGTTCCTTCCCCCC
AAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGTTCCGCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTT
CGAAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGTTGCTCCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGG
TTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCCTCTCTCCACTGTTCCTTCCTCCAAGTTGAAGGTTCTCATGCGCTTCGTTGCTACCTTCCTCCAA
GTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGC
TCCTTCTTCAAGTTCGAAGGCGCTTCTCTCCACTACTCCTTCTCCAAGTTCGAAGGCGTTTCTCTCCAGCTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCT
CCTTCTCCAAGTTCGAAGGCGCTTCTCTCTACTGCTCCTTCTCCAAGTTCGAAGGTGGTGAAATCACTGCAAGTGAAAAGCTGATGACGACCGTGGTGACCACCCCTGCA
GGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAAGCTGATGACGACCATGGTGGTGAAATCACTGCAAGTGAAAAGCTGATGAC
GACCGTGGTGACCACCCCTGCAATAAACTACAGTCATCAAAGTGACTGGTCTAGACAGACAGGTGGTGAAATCACTGCAAGTGAAAAGCTGATGACGACCGTGGTGACCA
CCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGATCGTGGTGACCACCCCTGCAGGAAACTACAGT
CATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGGGGAGTTTTAA
Protein sequenceShow/hide protein sequence
MLNKSFSKTFHKKTKENLATSYCIDVEEVDNSKKSEQRTSVFDRIKPPTIRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKR
KMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKFLLSKFEGLYTVRYCVVPSPSSKVLHCILLRCSFSKFEGSQLYNCYVVPPPSANDLMWCVVALFPLLS
SSMVLTQLCWSFFSPSSKVLTPSVAVPSFQGRRFSLAALQFFLPKFEGSHTSLQFLLPNSKVLMRFALQFLPSKFEGSHIASPQFLPPSSKVHTRFATVLLPPSSKFLPP
KFEGSHVASLQFLPPSLKVLTSLRSALRFVAVPSSKFEVPSSKFEGSHALRCSFLQVRRFSHALLQLLPPSSKVPSRASLAPSPSSKAPLSTVPSSKLKVLMRFVATFLQ
VRRFSHALLQLLPPSSKVPSRASLAPSPSSKALLSTAPSSSSKALLSTTPSPSSKAFLSSCSFSKFEGASLHCSFSKFEGASLYCSFSKFEGGEITASEKLMTTVVTTPA
GNYSHQSDWSRQVVKSLQVKADDDHGGEITASEKLMTTVVTTPAINYSHQSDWSRQTGGEITASEKLMTTVVTTPAGNYSHQSDWSRQVVKSLQVKLMTIVVTTPAGNYS
HQSDWSRQVVKSLQGEF