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Lag0031335 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031335
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionlys-63-specific deubiquitinase BRCC36-like
Genome locationchr11:7164316..7165487
RNA-Seq ExpressionLag0031335
SyntenyLag0031335
Gene Ontology termsGO:0006302 - double-strand break repair (biological process)
GO:0070537 - histone H2A K63-linked deubiquitination (biological process)
GO:0070531 - BRCA1-A complex (cellular component)
GO:0070552 - BRISC complex (cellular component)
GO:0004843 - thiol-dependent ubiquitin-specific protease activity (molecular function)
GO:0008237 - metallopeptidase activity (molecular function)
GO:0031593 - polyubiquitin modification-dependent protein binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0070122 - isopeptidase activity (molecular function)
InterPro domainsIPR000555 - JAB1/MPN/MOV34 metalloenzyme domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606786.1 Lys-63-specific deubiquitinase BRCC36, partial [Cucurbita argyrosperma subsp. sororia]1.5e-3996.67Show/hide
Query:  MSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAEISFASFIIMKF
        MSLT VKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQA+ISFA FIIMKF
Subjt:  MSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAEISFASFIIMKF

XP_022153607.1 lys-63-specific deubiquitinase BRCC36 isoform X1 [Momordica charantia]1.8e-3793.1Show/hide
Query:  EKKNGDPKMSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE
        +++NGD KMSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHS+NG+VTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE
Subjt:  EKKNGDPKMSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE

XP_022153609.1 lys-63-specific deubiquitinase BRCC36 isoform X2 [Momordica charantia]1.8e-3793.1Show/hide
Query:  EKKNGDPKMSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE
        +++NGD KMSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHS+NG+VTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE
Subjt:  EKKNGDPKMSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE

XP_023528524.1 lys-63-specific deubiquitinase BRCC36-like isoform X1 [Cucurbita pepo subsp. pepo]6.8e-3795.29Show/hide
Query:  KNGDPKMSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE
        +NGD KMSLT VKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHS+NGSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE
Subjt:  KNGDPKMSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE

XP_023528526.1 COP9 signalosome complex subunit 5-like isoform X3 [Cucurbita pepo subsp. pepo]6.8e-3795.29Show/hide
Query:  KNGDPKMSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE
        +NGD KMSLT VKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHS+NGSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE
Subjt:  KNGDPKMSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE

TrEMBL top hitse value%identityAlignment
A0A6J1DJE3 lys-63-specific deubiquitinase BRCC36 isoform X18.6e-3893.1Show/hide
Query:  EKKNGDPKMSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE
        +++NGD KMSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHS+NG+VTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE
Subjt:  EKKNGDPKMSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE

A0A6J1DJK4 lys-63-specific deubiquitinase BRCC36 isoform X28.6e-3893.1Show/hide
Query:  EKKNGDPKMSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE
        +++NGD KMSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHS+NG+VTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE
Subjt:  EKKNGDPKMSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE

A0A6J1GVS8 lys-63-specific deubiquitinase BRCC36-like isoform X13.1e-3598.73Show/hide
Query:  MSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE
        MSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHS+NGSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE
Subjt:  MSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE

A0A6J1ISM3 COP9 signalosome complex subunit 5-like isoform X33.1e-3598.73Show/hide
Query:  MSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE
        MSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHS+NGSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE
Subjt:  MSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE

A0A6J1IY95 lys-63-specific deubiquitinase BRCC36-like isoform X13.1e-3598.73Show/hide
Query:  MSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE
        MSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHS+NGSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE
Subjt:  MSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE

SwissProt top hitse value%identityAlignment
B0KWU8 Lys-63-specific deubiquitinase BRCC364.8e-0936.73Show/hide
Query:  SLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQT--------------------RSDRRKDRVETHPEQLAAASAQAE
        ++  V +  D +  CL HALSTE EE+MGL +G++             G   +T                    RSD+RKDRVE  PEQL+AAS +AE
Subjt:  SLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQT--------------------RSDRRKDRVETHPEQLAAASAQAE

B5X8M4 Lys-63-specific deubiquitinase BRCC361.1e-1041.77Show/hide
Query:  MSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE
        M+++ V +  D +  C+ HALSTE EE+MGL +G+++ ++   + ++I       RSD+RKDRVE  PEQL++A+ +AE
Subjt:  MSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE

P46736 Lys-63-specific deubiquitinase BRCC364.8e-0936.73Show/hide
Query:  SLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQT--------------------RSDRRKDRVETHPEQLAAASAQAE
        ++  V +  D +  CL HALSTE EE+MGL +G++             G   +T                    RSD+RKDRVE  PEQL+AAS +AE
Subjt:  SLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQT--------------------RSDRRKDRVETHPEQLAAASAQAE

Q4VA72 Lys-63-specific deubiquitinase BRCC361.9e-1043.04Show/hide
Query:  MSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE
        M++  V +  D +  C+TH+LSTE EE+MGL +G+++  K   + ++I       RSD+RKDRVE  PEQL+AA+ +A+
Subjt:  MSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE

Q66GV6 Lys-63-specific deubiquitinase BRCC362.5e-1043.04Show/hide
Query:  MSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE
        M++  V +  D +  C+TH+LSTE EE+MGL +G+++  K   + ++I       RSD+RKDRVE  PEQL+AA+ +A+
Subjt:  MSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE

Arabidopsis top hitse value%identityAlignment
AT1G80210.1 Mov34/MPN/PAD-1 family protein1.2e-3185Show/hide
Query:  MSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKN-GSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE
        MSLT V MSEDVW TCLTHALSTETEEIMGLLLGDIE+SK+ GS TA+IWGASPQ+RSDR+KDRVET+PEQLAAASAQA+
Subjt:  MSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKN-GSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE

AT1G80210.2 Mov34/MPN/PAD-1 family protein1.2e-3185Show/hide
Query:  MSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKN-GSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE
        MSLT V MSEDVW TCLTHALSTETEEIMGLLLGDIE+SK+ GS TA+IWGASPQ+RSDR+KDRVET+PEQLAAASAQA+
Subjt:  MSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKN-GSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE

AT3G06820.2 Mov34/MPN/PAD-1 family protein5.4e-3286.25Show/hide
Query:  MSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNG-SVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE
        MSLT V MSEDVW TCLTHALSTETEEIMGLLLGDIE+SKNG S TA+IWGASPQ RSDR+KDRVET+PEQLAAASAQA+
Subjt:  MSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNG-SVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCATGGATCGGTATCAACGGTACGCTGAACCGTACTGTATTGCTGCTCGAGAAGCCTTGCGATCCCCTGCTCTGCACAAGGTCCTTCGAAACACCGGCCAAGAATC
GAAGTTTCCGATTTCGGAGAAAAAAAACGGCGATCCAAAGATGTCTCTGACGGGCGTGAAGATGTCCGAAGACGTTTGGTTTACTTGTCTCACTCATGCATTGTCCACCG
AGACTGAGGAAATCATGGGGCTTCTTCTTGGCGATATCGAGCATTCAAAAAATGGTAGTGTAACTGCACTAATTTGGGGAGCATCGCCTCAGACACGGTCTGACAGAAGG
AAGGACCGTGTGGAGACTCATCCTGAACAACTGGCTGCTGCATCTGCCCAGGCTGAGATATCCTTTGCTTCTTTTATCATTATGAAATTCTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCATGGATCGGTATCAACGGTACGCTGAACCGTACTGTATTGCTGCTCGAGAAGCCTTGCGATCCCCTGCTCTGCACAAGGTCCTTCGAAACACCGGCCAAGAATC
GAAGTTTCCGATTTCGGAGAAAAAAAACGGCGATCCAAAGATGTCTCTGACGGGCGTGAAGATGTCCGAAGACGTTTGGTTTACTTGTCTCACTCATGCATTGTCCACCG
AGACTGAGGAAATCATGGGGCTTCTTCTTGGCGATATCGAGCATTCAAAAAATGGTAGTGTAACTGCACTAATTTGGGGAGCATCGCCTCAGACACGGTCTGACAGAAGG
AAGGACCGTGTGGAGACTCATCCTGAACAACTGGCTGCTGCATCTGCCCAGGCTGAGATATCCTTTGCTTCTTTTATCATTATGAAATTCTTGTAG
Protein sequenceShow/hide protein sequence
MVMDRYQRYAEPYCIAAREALRSPALHKVLRNTGQESKFPISEKKNGDPKMSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR
KDRVETHPEQLAAASAQAEISFASFIIMKFL