; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0031349 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031349
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr11:7358978..7362157
RNA-Seq ExpressionLag0031349
SyntenyLag0031349
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]3.9e-5365.73Show/hide
Query:  LLLLIEESSKDRVVVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDGRMAEMERKLNLLMKAVDERDLEIAYLKNQLQNREVAESSQTPAAGKNDK
        +L  + ES K  +V+K+NPL+      S +     +PDVMSVMMADV  +  MAEMERK+NLLMK VDERD EIA LK Q+Q RE AESSQTP    +DK
Subjt:  LLLLIEESSKDRVVVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDGRMAEMERKLNLLMKAVDERDLEIAYLKNQLQNREVAESSQTPAAGKNDK

Query:  GKAVEHEDQP-QHSASVAFLSIQQLQDMIMNSIRAQYGGPTQSSLLYSKPYTKRIDNLKLPIGYQPPKFQQFDGKGNP
        GK V  E+QP Q S SVA LS+QQLQDMI NSIRAQYGGP+Q+S +YSKPYTKRIDNL++P+GYQPPKFQQFDGKGNP
Subjt:  GKAVEHEDQP-QHSASVAFLSIQQLQDMIMNSIRAQYGGPTQSSLLYSKPYTKRIDNLKLPIGYQPPKFQQFDGKGNP

XP_031737053.1 uncharacterized protein LOC116402138 [Cucumis sativus]1.5e-5265.17Show/hide
Query:  LLLLIEESSKDRVVVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDGRMAEMERKLNLLMKAVDERDLEIAYLKNQLQNREVAESSQTPAAGKNDK
        +L  + ES K  +V+K+NPL+      S +     +PDVMSVMMADV  +  MAEMERK+NLLMK VDERD EIA LK Q+Q RE AESSQTP    +DK
Subjt:  LLLLIEESSKDRVVVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDGRMAEMERKLNLLMKAVDERDLEIAYLKNQLQNREVAESSQTPAAGKNDK

Query:  GKAVEHEDQP-QHSASVAFLSIQQLQDMIMNSIRAQYGGPTQSSLLYSKPYTKRIDNLKLPIGYQPPKFQQFDGKGNP
        GK V  E+QP Q S SVA LS+QQLQDMI +SIRAQYGGP+Q+S +YSKPYTKRIDNL++P+GYQPPKFQQFDGKGNP
Subjt:  GKAVEHEDQP-QHSASVAFLSIQQLQDMIMNSIRAQYGGPTQSSLLYSKPYTKRIDNLKLPIGYQPPKFQQFDGKGNP

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]1.5e-5265.17Show/hide
Query:  LLLLIEESSKDRVVVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDGRMAEMERKLNLLMKAVDERDLEIAYLKNQLQNREVAESSQTPAAGKNDK
        +L  + ES K  +V+K+NPL+      S +     +PDVMSVMMADV  +  MAEMERK+NLLMK VDERD EIA LK Q+Q RE AESSQTP    +DK
Subjt:  LLLLIEESSKDRVVVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDGRMAEMERKLNLLMKAVDERDLEIAYLKNQLQNREVAESSQTPAAGKNDK

Query:  GKAVEHEDQP-QHSASVAFLSIQQLQDMIMNSIRAQYGGPTQSSLLYSKPYTKRIDNLKLPIGYQPPKFQQFDGKGNP
        GK V  E+QP Q S SVA LS+QQLQDMI +SIRAQYGGP+Q+S +YSKPYTKRIDNL++P+GYQPPKFQQFDGKGNP
Subjt:  GKAVEHEDQP-QHSASVAFLSIQQLQDMIMNSIRAQYGGPTQSSLLYSKPYTKRIDNLKLPIGYQPPKFQQFDGKGNP

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]1.5e-5265.17Show/hide
Query:  LLLLIEESSKDRVVVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDGRMAEMERKLNLLMKAVDERDLEIAYLKNQLQNREVAESSQTPAAGKNDK
        +L  + ES K  +V+K+NPL+      S +     +PDVMSVMMADV  +  MAEMERK+NLLMK VDERD EIA LK Q+Q RE AESSQTP    +DK
Subjt:  LLLLIEESSKDRVVVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDGRMAEMERKLNLLMKAVDERDLEIAYLKNQLQNREVAESSQTPAAGKNDK

Query:  GKAVEHEDQP-QHSASVAFLSIQQLQDMIMNSIRAQYGGPTQSSLLYSKPYTKRIDNLKLPIGYQPPKFQQFDGKGNP
        GK V  E+QP Q S SVA LS+QQLQDMI +SIRAQYGGP+Q+S +YSKPYTKRIDNL++P+GYQPPKFQQFDGKGNP
Subjt:  GKAVEHEDQP-QHSASVAFLSIQQLQDMIMNSIRAQYGGPTQSSLLYSKPYTKRIDNLKLPIGYQPPKFQQFDGKGNP

XP_031742199.1 uncharacterized protein LOC105435721 [Cucumis sativus]3.9e-5365.73Show/hide
Query:  LLLLIEESSKDRVVVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDGRMAEMERKLNLLMKAVDERDLEIAYLKNQLQNREVAESSQTPAAGKNDK
        +L  + ES K  +V+K+NPL+      S +     +PDVMSVMMADV  +  MAEMERK+NLLMK VDERD EIA LK Q+Q RE AESSQTP    +DK
Subjt:  LLLLIEESSKDRVVVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDGRMAEMERKLNLLMKAVDERDLEIAYLKNQLQNREVAESSQTPAAGKNDK

Query:  GKAVEHEDQP-QHSASVAFLSIQQLQDMIMNSIRAQYGGPTQSSLLYSKPYTKRIDNLKLPIGYQPPKFQQFDGKGNP
        GK V  E+QP Q S SVA LS+QQLQDMI NSIRAQYGGP+Q+S +YSKPYTKRIDNL++P+GYQPPKFQQFDGKGNP
Subjt:  GKAVEHEDQP-QHSASVAFLSIQQLQDMIMNSIRAQYGGPTQSSLLYSKPYTKRIDNLKLPIGYQPPKFQQFDGKGNP

TrEMBL top hitse value%identityAlignment
A0A5A7T9K9 Ty3-gypsy retrotransposon protein4.0e-5162.79Show/hide
Query:  ESSKDRVVVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDGRMAEMERKLNLLMKAVDERDLEIAYLKNQLQNREVAESSQTPAAGKNDKGKAVEH
        ES K  +V+K+NPL+++    S + K   NPDVMSVMMAD+  +  MAEMERK+N LMKA +ERD EI  L+ Q++ RE  ESSQTP     DKGK V  
Subjt:  ESSKDRVVVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDGRMAEMERKLNLLMKAVDERDLEIAYLKNQLQNREVAESSQTPAAGKNDKGKAVEH

Query:  EDQP-QHSASVAFLSIQQLQDMIMNSIRAQYGGPTQSSLLYSKPYTKRIDNLKLPIGYQPPKFQQFDGKGNP
        E+QP Q S SVA LS+QQLQDMI+N IRAQYGGP Q++ +YSKPYTKRID+L++P+GYQPPKFQQFDGKGNP
Subjt:  EDQP-QHSASVAFLSIQQLQDMIMNSIRAQYGGPTQSSLLYSKPYTKRIDNLKLPIGYQPPKFQQFDGKGNP

A0A5A7U2G2 Ty3-gypsy retrotransposon protein2.6e-5061.24Show/hide
Query:  LLLLIEESSKDRVVVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDGRMAEMERKLNLLMKAVDERDLEIAYLKNQLQNREVAESSQTPAAGKNDK
        +L  + ES K  +V+K+NPL+++    S + K   +PDVMSVMMAD+  +  MAE+ERK+N LMK V+ERD  I  L+ Q++ RE A+SSQTP     DK
Subjt:  LLLLIEESSKDRVVVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDGRMAEMERKLNLLMKAVDERDLEIAYLKNQLQNREVAESSQTPAAGKNDK

Query:  GKAVEHEDQP-QHSASVAFLSIQQLQDMIMNSIRAQYGGPTQSSLLYSKPYTKRIDNLKLPIGYQPPKFQQFDGKGNP
        GK V  E+QP Q S SVA LS+QQLQDMI NSIRAQYGGP Q+S +YSKPYTKRIDNL++P+GYQPPKFQQFDGKGNP
Subjt:  GKAVEHEDQP-QHSASVAFLSIQQLQDMIMNSIRAQYGGPTQSSLLYSKPYTKRIDNLKLPIGYQPPKFQQFDGKGNP

A0A5A7VDN4 Ty3-gypsy retrotransposon protein1.5e-5062.79Show/hide
Query:  ESSKDRVVVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDGRMAEMERKLNLLMKAVDERDLEIAYLKNQLQNREVAESSQTPAAGKNDKGKAVEH
        ES K  +V+++NPL+++   TS + K   + DVMSVMMAD+  +  MAEMERK+N LMKAV+ERD EI  L+ Q++ RE AESSQTP     DKGK V  
Subjt:  ESSKDRVVVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDGRMAEMERKLNLLMKAVDERDLEIAYLKNQLQNREVAESSQTPAAGKNDKGKAVEH

Query:  EDQP-QHSASVAFLSIQQLQDMIMNSIRAQYGGPTQSSLLYSKPYTKRIDNLKLPIGYQPPKFQQFDGKGNP
        ++QP Q S SVA LS+QQLQDMI NSIRAQYGGP  ++ +YSKPYTKRIDNL++P+GYQPPKFQQFDGKGNP
Subjt:  EDQP-QHSASVAFLSIQQLQDMIMNSIRAQYGGPTQSSLLYSKPYTKRIDNLKLPIGYQPPKFQQFDGKGNP

A0A5D3BY54 Ty3-gypsy retrotransposon protein8.9e-5161.8Show/hide
Query:  LLLLIEESSKDRVVVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDGRMAEMERKLNLLMKAVDERDLEIAYLKNQLQNREVAESSQTPAAGKNDK
        +L  + ES K  +V+K+NPL+++   +S + K   +PDVMSVMMAD+  +  MAEMERK+N LMKAV+ERD EI  L+ Q++ RE AESSQTP     DK
Subjt:  LLLLIEESSKDRVVVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDGRMAEMERKLNLLMKAVDERDLEIAYLKNQLQNREVAESSQTPAAGKNDK

Query:  GKAVEHEDQP-QHSASVAFLSIQQLQDMIMNSIRAQYGGPTQSSLLYSKPYTKRIDNLKLPIGYQPPKFQQFDGKGNP
        GK V  E+QP Q S SVA LS+QQLQDMI NSIRAQYGGP Q++ +YSK YTKRIDNL++P+GYQPPKFQQF+GKGNP
Subjt:  GKAVEHEDQP-QHSASVAFLSIQQLQDMIMNSIRAQYGGPTQSSLLYSKPYTKRIDNLKLPIGYQPPKFQQFDGKGNP

A0A5D3DXI6 Ty3-gypsy retrotransposon protein2.6e-5061.24Show/hide
Query:  LLLLIEESSKDRVVVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDGRMAEMERKLNLLMKAVDERDLEIAYLKNQLQNREVAESSQTPAAGKNDK
        +L  + ES K  +V+K+NPL+++    S + K   +PDVMSVMMAD+  +  MAE+ERK+N LMK V+ERD  I  L+ Q++ RE A+SSQTP     DK
Subjt:  LLLLIEESSKDRVVVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDGRMAEMERKLNLLMKAVDERDLEIAYLKNQLQNREVAESSQTPAAGKNDK

Query:  GKAVEHEDQP-QHSASVAFLSIQQLQDMIMNSIRAQYGGPTQSSLLYSKPYTKRIDNLKLPIGYQPPKFQQFDGKGNP
        GK V  E+QP Q S SVA LS+QQLQDMI NSIRAQYGGP Q+S +YSKPYTKRIDNL++P+GYQPPKFQQFDGKGNP
Subjt:  GKAVEHEDQP-QHSASVAFLSIQQLQDMIMNSIRAQYGGPTQSSLLYSKPYTKRIDNLKLPIGYQPPKFQQFDGKGNP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCCCACCCCGTTGCTGCCACAAACACTCGCCGCTCCCACGAACCCCCGCAGCTCCCATTTCAAGCTCAAATCGTGTCTGAAACGAAAGGGAAATCCCCTTCGTTT
CAGACCACGATTCGTGCGGTTCGCTGGAGAAGGAGGTCGAGAGGGAGGAGCTCGGGTCGTGCGTGGATCTGCTCACTACGAGTTCGCGCGTGTCGGTCCTAAGGAATTGA
GATCAGGGAGGATTATACTCCTCTTGCTGATTGAAGAATCCTCTAAGGATAGGGTTGTAGTCAAAGACAACCCACTGTTCGAATCTGTCGTTCCAACATCTAAGCAGCCA
AAGGATACACTAAATCCTGATGTGATGTCCGTCATGATGGCCGATGTAGACCAGGATGGAAGAATGGCAGAGATGGAAAGGAAACTCAATCTCTTAATGAAGGCAGTTGA
TGAGAGAGATCTTGAAATTGCCTATTTGAAGAACCAGCTGCAGAACCGAGAAGTGGCTGAGTCTAGCCAGACCCCTGCTGCAGGAAAGAATGATAAAGGGAAGGCTGTCG
AGCATGAGGACCAACCGCAACACTCCGCGTCAGTTGCCTTTTTATCTATCCAACAACTGCAAGACATGATCATGAATTCCATCAGGGCTCAGTATGGTGGACCCACTCAA
AGTTCCCTCTTGTATTCTAAACCTTATACAAAGAGGATTGACAATCTCAAACTACCCATTGGGTATCAGCCTCCCAAGTTCCAACAGTTTGATGGAAAGGGTAACCCAAC
ATCGCTCACTTTGTTGAAACCTGTGAGAACGCTGTTGGGAACAAATGGAGAGAGAGTTTCTAAATCGCTTCTTGATAACTGCCCAAAAGATTATGCTGCTGGGCGACTAG
AGGGAGCAAATTCTGTGCTGCAGCAAAACTGGGAACAGAACTGCCACATCACAGCTCGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACCCCACCCCGTTGCTGCCACAAACACTCGCCGCTCCCACGAACCCCCGCAGCTCCCATTTCAAGCTCAAATCGTGTCTGAAACGAAAGGGAAATCCCCTTCGTTT
CAGACCACGATTCGTGCGGTTCGCTGGAGAAGGAGGTCGAGAGGGAGGAGCTCGGGTCGTGCGTGGATCTGCTCACTACGAGTTCGCGCGTGTCGGTCCTAAGGAATTGA
GATCAGGGAGGATTATACTCCTCTTGCTGATTGAAGAATCCTCTAAGGATAGGGTTGTAGTCAAAGACAACCCACTGTTCGAATCTGTCGTTCCAACATCTAAGCAGCCA
AAGGATACACTAAATCCTGATGTGATGTCCGTCATGATGGCCGATGTAGACCAGGATGGAAGAATGGCAGAGATGGAAAGGAAACTCAATCTCTTAATGAAGGCAGTTGA
TGAGAGAGATCTTGAAATTGCCTATTTGAAGAACCAGCTGCAGAACCGAGAAGTGGCTGAGTCTAGCCAGACCCCTGCTGCAGGAAAGAATGATAAAGGGAAGGCTGTCG
AGCATGAGGACCAACCGCAACACTCCGCGTCAGTTGCCTTTTTATCTATCCAACAACTGCAAGACATGATCATGAATTCCATCAGGGCTCAGTATGGTGGACCCACTCAA
AGTTCCCTCTTGTATTCTAAACCTTATACAAAGAGGATTGACAATCTCAAACTACCCATTGGGTATCAGCCTCCCAAGTTCCAACAGTTTGATGGAAAGGGTAACCCAAC
ATCGCTCACTTTGTTGAAACCTGTGAGAACGCTGTTGGGAACAAATGGAGAGAGAGTTTCTAAATCGCTTCTTGATAACTGCCCAAAAGATTATGCTGCTGGGCGACTAG
AGGGAGCAAATTCTGTGCTGCAGCAAAACTGGGAACAGAACTGCCACATCACAGCTCGTTAG
Protein sequenceShow/hide protein sequence
MNPTPLLPQTLAAPTNPRSSHFKLKSCLKRKGNPLRFRPRFVRFAGEGGREGGARVVRGSAHYEFARVGPKELRSGRIILLLLIEESSKDRVVVKDNPLFESVVPTSKQP
KDTLNPDVMSVMMADVDQDGRMAEMERKLNLLMKAVDERDLEIAYLKNQLQNREVAESSQTPAAGKNDKGKAVEHEDQPQHSASVAFLSIQQLQDMIMNSIRAQYGGPTQ
SSLLYSKPYTKRIDNLKLPIGYQPPKFQQFDGKGNPTSLTLLKPVRTLLGTNGERVSKSLLDNCPKDYAAGRLEGANSVLQQNWEQNCHITAR