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Lag0031357 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031357
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr11:7465528..7465941
RNA-Seq ExpressionLag0031357
SyntenyLag0031357
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN77126.1 hypothetical protein VITISV_013628 [Vitis vinifera]4.9e-0842.86Show/hide
Query:  PISTPGLLGKPHHRNPFQQQKWPKGQGS---SAKPICKICGKTGHTALVFYQRANLSFQPSPNPQPQAHFTQIQNSNPPILPSPPISTNPSTSTS-THP-
        P S P +LGKP  + P    KW + QG+     +P C+ICGK GH AL  Y RANL++QP           Q  NS P   P  PI+   +TSTS T P 
Subjt:  PISTPGLLGKPHHRNPFQQQKWPKGQGS---SAKPICKICGKTGHTALVFYQRANLSFQPSPNPQPQAHFTQIQNSNPPILPSPPISTNPSTSTS-THP-

Query:  ---DDSWFMDSG
           D  W+MDSG
Subjt:  ---DDSWFMDSG

GFY82848.1 hypothetical protein Acr_02g0010880 [Actinidia rufa]5.4e-0740.52Show/hide
Query:  KGSQSNSFPFPISTPGLLGKPHHRNPFQQQKWPKGQGSSAKPICKICGKTGHTALVFYQRANLSFQPSPNPQPQAHFTQIQNSNPPILPSPPIST--NPS
        K   +NSFP   S     G+  +RNP      P       +P C+IC K GHTA   Y R NL++QP P P         +N N  I P+P IST  N  
Subjt:  KGSQSNSFPFPISTPGLLGKPHHRNPFQQQKWPKGQGSSAKPICKICGKTGHTALVFYQRANLSFQPSPNPQPQAHFTQIQNSNPPILPSPPIST--NPS

Query:  TSTSTHPDDSWFMDSG
         S S+ PD SW+MDSG
Subjt:  TSTSTHPDDSWFMDSG

RVW77188.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]7.1e-0738.61Show/hide
Query:  LLGKPHHRNPFQQQKW-PKGQGSSAKPICKICGKTGHTALVFYQRANLSFQPSPNPQ--PQAHFTQIQNSNPPILPSPPISTNPSTSTSTHPDDSWFMDS
        +LGKP  +    Q +W P     + KP C+ICGK GH AL+ +   NL++ P P+P+       T  Q SNPP   S P   + + + +T PD +W+MDS
Subjt:  LLGKPHHRNPFQQQKW-PKGQGSSAKPICKICGKTGHTALVFYQRANLSFQPSPNPQ--PQAHFTQIQNSNPPILPSPPISTNPSTSTSTHPDDSWFMDS

Query:  G
        G
Subjt:  G

XP_022148871.1 uncharacterized protein LOC111017438 [Momordica charantia]1.9e-0739.68Show/hide
Query:  SQSNSFPFPIST-PGLLGKPHHRNPFQQQKWPKGQGSSAKP--ICKICGKTGHTALVFYQRAN----LSFQPSPNPQPQAHFTQIQNSNPPILPSPPIST
        SQ +  PF   T PGLLGKP   N   Q  WP  Q S   P   C+IC K GHT    Y RAN    L+F P+  P P A F  + +S+     S P + 
Subjt:  SQSNSFPFPIST-PGLLGKPHHRNPFQQQKWPKGQGSSAKP--ICKICGKTGHTALVFYQRAN----LSFQPSPNPQPQAHFTQIQNSNPPILPSPPIST

Query:  NPST-------STSTHPDDSWFMDSG
         P T       +    PDD W+MDSG
Subjt:  NPST-------STSTHPDDSWFMDSG

XP_022155181.1 uncharacterized protein LOC111022315 [Momordica charantia]7.1e-0738.46Show/hide
Query:  NANRPFQSATSSSGGKGSQSNSFPFPISTPGLLGKPHHRNPFQQQKWPKGQGSSAKPICKICGKTGHTALVFYQRANLSFQPSPNPQPQAHFTQIQNSNP
        N+ RP    +  +  K S  NS      +  +LGKP         KWP  + SS+K  C+ICGK GH+A V Y R N+++    N  PQA +  +Q    
Subjt:  NANRPFQSATSSSGGKGSQSNSFPFPISTPGLLGKPHHRNPFQQQKWPKGQGSSAKPICKICGKTGHTALVFYQRANLSFQPSPNPQPQAHFTQIQNSNP

Query:  PILPSPPISTNPSTSTS-THPDDSWFMDSG
           PSP   T+PS+     HPD+SWFMDSG
Subjt:  PILPSPPISTNPSTSTS-THPDDSWFMDSG

TrEMBL top hitse value%identityAlignment
A0A438GYC1 Retrovirus-related Pol polyprotein from transposon RE13.4e-0738.61Show/hide
Query:  LLGKPHHRNPFQQQKW-PKGQGSSAKPICKICGKTGHTALVFYQRANLSFQPSPNPQ--PQAHFTQIQNSNPPILPSPPISTNPSTSTSTHPDDSWFMDS
        +LGKP  +    Q +W P     + KP C+ICGK GH AL+ +   NL++ P P+P+       T  Q SNPP   S P   + + + +T PD +W+MDS
Subjt:  LLGKPHHRNPFQQQKW-PKGQGSSAKPICKICGKTGHTALVFYQRANLSFQPSPNPQ--PQAHFTQIQNSNPPILPSPPISTNPSTSTSTHPDDSWFMDS

Query:  G
        G
Subjt:  G

A0A6J1DQX7 uncharacterized protein LOC1110223153.4e-0738.46Show/hide
Query:  NANRPFQSATSSSGGKGSQSNSFPFPISTPGLLGKPHHRNPFQQQKWPKGQGSSAKPICKICGKTGHTALVFYQRANLSFQPSPNPQPQAHFTQIQNSNP
        N+ RP    +  +  K S  NS      +  +LGKP         KWP  + SS+K  C+ICGK GH+A V Y R N+++    N  PQA +  +Q    
Subjt:  NANRPFQSATSSSGGKGSQSNSFPFPISTPGLLGKPHHRNPFQQQKWPKGQGSSAKPICKICGKTGHTALVFYQRANLSFQPSPNPQPQAHFTQIQNSNP

Query:  PILPSPPISTNPSTSTS-THPDDSWFMDSG
           PSP   T+PS+     HPD+SWFMDSG
Subjt:  PILPSPPISTNPSTSTS-THPDDSWFMDSG

A0A7J0E8R3 Uncharacterized protein2.6e-0740.52Show/hide
Query:  KGSQSNSFPFPISTPGLLGKPHHRNPFQQQKWPKGQGSSAKPICKICGKTGHTALVFYQRANLSFQPSPNPQPQAHFTQIQNSNPPILPSPPIST--NPS
        K   +NSFP   S     G+  +RNP      P       +P C+IC K GHTA   Y R NL++QP P P         +N N  I P+P IST  N  
Subjt:  KGSQSNSFPFPISTPGLLGKPHHRNPFQQQKWPKGQGSSAKPICKICGKTGHTALVFYQRANLSFQPSPNPQPQAHFTQIQNSNPPILPSPPIST--NPS

Query:  TSTSTHPDDSWFMDSG
         S S+ PD SW+MDSG
Subjt:  TSTSTHPDDSWFMDSG

A5BPS3 Uncharacterized protein2.4e-0842.86Show/hide
Query:  PISTPGLLGKPHHRNPFQQQKWPKGQGS---SAKPICKICGKTGHTALVFYQRANLSFQPSPNPQPQAHFTQIQNSNPPILPSPPISTNPSTSTS-THP-
        P S P +LGKP  + P    KW + QG+     +P C+ICGK GH AL  Y RANL++QP           Q  NS P   P  PI+   +TSTS T P 
Subjt:  PISTPGLLGKPHHRNPFQQQKWPKGQGS---SAKPICKICGKTGHTALVFYQRANLSFQPSPNPQPQAHFTQIQNSNPPILPSPPISTNPSTSTS-THP-

Query:  ---DDSWFMDSG
           D  W+MDSG
Subjt:  ---DDSWFMDSG

A5BWU6 Reverse transcriptase Ty1/copia-type domain-containing protein4.5e-0738.61Show/hide
Query:  LLGKPHHRNPFQQQKW-PKGQGSSAKPICKICGKTGHTALVFYQRANLSFQPSPNPQ--PQAHFTQIQNSNPPILPSPPISTNPSTSTSTHPDDSWFMDS
        +LGKP  +    Q +W P     + KP C+ICGK GH AL+ +   NL++ P P+P+       T  Q SNPP   S P   + + + +T PD +W+MDS
Subjt:  LLGKPHHRNPFQQQKW-PKGQGSSAKPICKICGKTGHTALVFYQRANLSFQPSPNPQ--PQAHFTQIQNSNPPILPSPPISTNPSTSTSTHPDDSWFMDS

Query:  G
        G
Subjt:  G

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTCTCAAATGCCAATAGGCCATTTCAATCTGCTACATCTTCTTCTGGAGGTAAGGGATCTCAGTCTAACTCCTTTCCTTTTCCCATTTCAACACCTGGACTCTT
GGGAAAACCCCACCACCGCAACCCCTTTCAACAACAAAAGTGGCCTAAAGGCCAAGGGTCCTCTGCTAAGCCCATATGTAAAATATGTGGGAAGACAGGGCACACTGCCT
TAGTTTTTTATCAACGTGCCAACCTCTCCTTTCAACCTTCTCCAAATCCACAACCACAAGCTCATTTTACCCAAATCCAAAATTCCAACCCTCCCATTCTACCTTCACCG
CCTATATCAACCAACCCATCGACCTCAACCAGTACACACCCCGACGATTCATGGTTCATGGATTCAGGGCTACTCATCATATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTCTCAAATGCCAATAGGCCATTTCAATCTGCTACATCTTCTTCTGGAGGTAAGGGATCTCAGTCTAACTCCTTTCCTTTTCCCATTTCAACACCTGGACTCTT
GGGAAAACCCCACCACCGCAACCCCTTTCAACAACAAAAGTGGCCTAAAGGCCAAGGGTCCTCTGCTAAGCCCATATGTAAAATATGTGGGAAGACAGGGCACACTGCCT
TAGTTTTTTATCAACGTGCCAACCTCTCCTTTCAACCTTCTCCAAATCCACAACCACAAGCTCATTTTACCCAAATCCAAAATTCCAACCCTCCCATTCTACCTTCACCG
CCTATATCAACCAACCCATCGACCTCAACCAGTACACACCCCGACGATTCATGGTTCATGGATTCAGGGCTACTCATCATATGA
Protein sequenceShow/hide protein sequence
MGFSNANRPFQSATSSSGGKGSQSNSFPFPISTPGLLGKPHHRNPFQQQKWPKGQGSSAKPICKICGKTGHTALVFYQRANLSFQPSPNPQPQAHFTQIQNSNPPILPSP
PISTNPSTSTSTHPDDSWFMDSGLLII