; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0031383 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031383
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr11:7806754..7810535
RNA-Seq ExpressionLag0031383
SyntenyLag0031383
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR000772 - Ricin B, lectin domain
IPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023876296.1 uncharacterized protein LOC111988743 [Quercus suber]6.9e-2027.61Show/hide
Query:  CSIKENGSNSNFDQVNQWWKFLWARQIPSKVKIFCWRLNHDFLPTEGLSLFIMQSIYCGGANRTCPQRILKG---LWGCAGGPGIGG-------------
        C+ ++  S+S+F  ++Q W  LW   +P KVK+F WR   + LPT   +    + +    A   C +    G   LW CA    +               
Subjt:  CSIKENGSNSNFDQVNQWWKFLWARQIPSKVKIFCWRLNHDFLPTEGLSLFIMQSIYCGGANRTCPQRILKG---LWGCAGGPGIGG-------------

Query:  ------------------IRMFLVLCAL----------------ERWRGKR----------------------EAVKWSPPIAPNYKLNTDAATDKELKL
                            +FLV   L                 RW  KR                       A  W  P  P YKLN DAA  KEL  
Subjt:  ------------------IRMFLVLCAL----------------ERWRGKR----------------------EAVKWSPPIAPNYKLNTDAATDKELKL

Query:  SSLGAIIRDEGGEVMLTWMKKVPFVQDVDVLEAMVVRNSLLVVKDGGFRQLEVESDSARVVWLLKSNGCDRSEVGMIVDEIRQISKDFQSCSFSWCSRSR
        S +GAIIR+  GEVM     K P V+D +  E +  R ++    D GF +L +E D+A V+  L   G D S +G +V +++ ++   +  SFS   R  
Subjt:  SSLGAIIRDEGGEVMLTWMKKVPFVQDVDVLEAMVVRNSLLVVKDGGFRQLEVESDSARVVWLLKSNGCDRSEVGMIVDEIRQISKDFQSCSFSWCSRSR

Query:  NVMTHKVVRAVLMNELND-VWIEEVP
        N + H + R    N + D +W+EE P
Subjt:  NVMTHKVVRAVLMNELND-VWIEEVP

XP_023915286.1 uncharacterized protein LOC112026812 [Quercus suber]8.1e-2125.62Show/hide
Query:  GSNSNFDQVNQWWKFLWARQIPSKVKIFCWRLNHDFLPT-EGL-SLFIMQSIYCGGANRTCPQRILKGLWGCAGGPGIGG--------------------
        G++SN    +  W  +W  +IP+K+K+F W+  H+ LPT E L    I+++  C    +  P+ IL  LW C     +                      
Subjt:  GSNSNFDQVNQWWKFLWARQIPSKVKIFCWRLNHDFLPT-EGL-SLFIMQSIYCGGANRTCPQRILKGLWGCAGGPGIGG--------------------

Query:  ------------IRMFLVLCALERWRGKREAV---------------------------------------KWSPPIAPNYKLNTDAATDKELKLSSLGA
                       FLVLC L  W  +   V                                       +W PP+   YKLN D A   ++  S +G 
Subjt:  ------------IRMFLVLCALERWRGKREAV---------------------------------------KWSPPIAPNYKLNTDAATDKELKLSSLGA

Query:  IIRDEGGEVMLTWMKKVPFVQDVDVLEAMVVRNSLLVVKDGGFRQLEVESDSARVVWLLKSNGCDRSEVGMIVDEIRQISKDFQSCSFSWCSRSRNVMTH
        IIR+  G+VM     + P V D D  E +  R  L    + GF  L VE D+  V+  + SN  D S +G +VD++R ++   +   F    RS N + H
Subjt:  IIRDEGGEVMLTWMKKVPFVQDVDVLEAMVVRNSLLVVKDGGFRQLEVESDSARVVWLLKSNGCDRSEVGMIVDEIRQISKDFQSCSFSWCSRSRNVMTH

Query:  KVVRAVLMNELNDVWIEEVP
         + R       + VW+E+ P
Subjt:  KVVRAVLMNELNDVWIEEVP

XP_024200343.1 uncharacterized protein LOC112203645 [Rosa chinensis]6.9e-2032.5Show/hide
Query:  SNSNFDQVNQWWKFLWARQIPSKVKIFCWRLNHDFLPTEG--------LSLFI--------MQSIYCGGANRTCPQRILKGLWGCAGGPGIGGIRMFLVL
        SNS+  +  Q W  LW  +I +KVK+F WR    FLP           +  F+         QSI CG        R            G+      +V 
Subjt:  SNSNFDQVNQWWKFLWARQIPSKVKIFCWRLNHDFLPTEG--------LSLFI--------MQSIYCGGANRTCPQRILKGLWGCAGGPGIGGIRMFLVL

Query:  CALERWRG-----------KREAVKWSPPIAPNYKLNTDAATDKELKLSSLGAIIRDEGGEVMLTWMKKVPFVQDVDVLEAMVVRNSLLVVKDGGFRQLE
         A E W             KR  VKW PP APN KLNTDAA D + K + LG ++RD  G++     K +P    +  +EA+ V + LL+ ++ GF+ L 
Subjt:  CALERWRG-----------KREAVKWSPPIAPNYKLNTDAATDKELKLSSLGAIIRDEGGEVMLTWMKKVPFVQDVDVLEAMVVRNSLLVVKDGGFRQLE

Query:  VESDSARVVWLLKSNGCDRSEVGMIVDEIRQISKDF-QSC
        VESDS  V+  L     D S  G ++D+I+ ++    QSC
Subjt:  VESDSARVVWLLKSNGCDRSEVGMIVDEIRQISKDF-QSC

XP_030969743.1 uncharacterized protein LOC115990020 [Quercus lobata]6.9e-2034.38Show/hide
Query:  VKWSPPIAPNYKLNTDAATDKELKLSSLGAIIRDEGGEVMLTWMKKVPFVQDVDVLEAMVVRNSLLVVKDGGFRQLEVESDSARVVWLLKSNGCDRSEVG
        VKW PP  P YK N DAA  ++L L+ LG ++RD GG ++    +K+   Q V++ EA+  R ++L   +    ++ VE D  RV+  LK  G   +  G
Subjt:  VKWSPPIAPNYKLNTDAATDKELKLSSLGAIIRDEGGEVMLTWMKKVPFVQDVDVLEAMVVRNSLLVVKDGGFRQLEVESDSARVVWLLKSNGCDRSEVG

Query:  MIVDEIRQISKDFQSCSFSWCSRSRNVMTHKVVRAVLMNELNDVWIEEVPAILRVDLQAE
         +V+E R++    + CSF    R  N + H +V   +++   DVW+EE+P  L   LQ +
Subjt:  MIVDEIRQISKDFQSCSFSWCSRSRNVMTHKVVRAVLMNELNDVWIEEVPAILRVDLQAE

XP_042965938.1 uncharacterized protein LOC122299618 [Carya illinoinensis]3.3e-2227.24Show/hide
Query:  GSNSNFDQVNQWWKFLWARQIPSKVKIFCWRLNHDFLPTEGLSLFIMQSIYCGGANRTCP------QRILKGLWGCAGGPGIGGIRMFLVLCALERW---
        G NS   + +  W+ +W   I  KVK+F WR     L T   S  +M+ I     N  CP      +     LW C     +        L   ++W   
Subjt:  GSNSNFDQVNQWWKFLWARQIPSKVKIFCWRLNHDFLPTEGLSLFIMQSIYCGGANRTCP------QRILKGLWGCAGGPGIGGIRMFLVLCALERW---

Query:  ----RGKREAVKWSPPIAPNYKLNTDAATDKELKLSSLGAIIRDEGGEVMLTWMKKVPFVQDVDVLEAMVVRNSLLVVKDGGFRQLEVESDSARVVWLLK
            R +R  V+WS P     K N DAA DK+     +G +IRDE GEV++   +++ ++ D  + E+  +R +L V +D  F  +  E D+  +V  + 
Subjt:  ----RGKREAVKWSPPIAPNYKLNTDAATDKELKLSSLGAIIRDEGGEVMLTWMKKVPFVQDVDVLEAMVVRNSLLVVKDGGFRQLEVESDSARVVWLLK

Query:  SNGCDRSEVGMIVDEIRQISKDFQSCSFSWCSRSRNVMTHKVVRAVLMNELNDVWIEEVPAILRVDLQAERRDSSRVGQ
        +   D S  G ++++++ + K  +    S+  R  N   H + R VL  +   VWIE+ P  +R  +  E+  S  + Q
Subjt:  SNGCDRSEVGMIVDEIRQISKDFQSCSFSWCSRSRNVMTHKVVRAVLMNELNDVWIEEVPAILRVDLQAERRDSSRVGQ

TrEMBL top hitse value%identityAlignment
A0A2N9F2A9 RNase H domain-containing protein2.7e-2226.47Show/hide
Query:  LLACSIKENGSNSNFDQVNQWWKFLWARQIPSKVKIFCWRLNHDFLPTEG--LSLFIMQSIYCGGANRTCPQRILKGLWGC----------AGGPGIGG-
        LL  S +E+  +S+  +++Q WK +W+  +P K++ F WR  H+ LPT+       I+    C   +    +  +  LW C          + G  +G  
Subjt:  LLACSIKENGSNSNFDQVNQWWKFLWARQIPSKVKIFCWRLNHDFLPTEG--LSLFIMQSIYCGGANRTCPQRILKGLWGC----------AGGPGIGG-

Query:  --------------------IRMFLVLCALERWR-----------------GKREAVKWSPPIAPNYKLNTDAATDKELKLSSLGAIIRDEGGEVMLTWM
                            +++F ++     +R                 G  E VKW+PP   +YK+N D A   +   + +G I+R+  GEVM +  
Subjt:  --------------------IRMFLVLCALERWR-----------------GKREAVKWSPPIAPNYKLNTDAATDKELKLSSLGAIIRDEGGEVMLTWM

Query:  KKVPFVQDVDVLEAMVVRNSLLVVKDGGFRQLEVESDSARVVWLLKSNGCDRSEVGMIVDEIRQISKDFQSCSFSWCSRSRNVMTHKVVRAVLMNELNDV
         ++PF   V+ LEA   R+++   KD GF +  +E DS  VV  L       +  G I+D+I+QI++  QS  F    R  NVM H + +    N+  + 
Subjt:  KKVPFVQDVDVLEAMVVRNSLLVVKDGGFRQLEVESDSARVVWLLKSNGCDRSEVGMIVDEIRQISKDFQSCSFSWCSRSRNVMTHKVVRAVLMNELNDV

Query:  WIEEVP
         +E VP
Subjt:  WIEEVP

A0A2N9GAI8 Uncharacterized protein1.6e-2226.79Show/hide
Query:  SNFDQVNQW-----WKFLWARQIPSKVKIFCWRLNHDF-LPTEGLSLFIMQSIYCGGANRTCPQRILKGLWGCAGGPGIGGIRMFLVLCAL---------
        S  +   QW     WK +W  ++P+KVK F WR  HD  L   GL    +      G  R+  +  L  LW C        +    V C L         
Subjt:  SNFDQVNQW-----WKFLWARQIPSKVKIFCWRLNHDF-LPTEGLSLFIMQSIYCGGANRTCPQRILKGLWGCAGGPGIGGIRMFLVLCAL---------

Query:  ------ERWRGKREAVKWSPPIAPNYKLNTDAATDKELKLSSLGAIIRDEGGEVMLTWMKKVPFVQDVDVLEAMVVRNSLLVVKDGGFRQLEVESDSARV
              ++ R +   ++W  P++  YK+N D A  KE     +G +IRD  G V+ T  +KV      ++++A+  + +++  K+ G   +EVE D+  V
Subjt:  ------ERWRGKREAVKWSPPIAPNYKLNTDAATDKELKLSSLGAIIRDEGGEVMLTWMKKVPFVQDVDVLEAMVVRNSLLVVKDGGFRQLEVESDSARV

Query:  VWLLKSNGCDRSEVGMIVDEIRQISKDFQSCSFSWCSRSRNVMTHKVVRAVLMNELNDVWIEEVP
        +  L+SN    +  G+++++ + + ++FQ  S S    S N + H + R         +W+EEVP
Subjt:  VWLLKSNGCDRSEVGMIVDEIRQISKDFQSCSFSWCSRSRNVMTHKVVRAVLMNELNDVWIEEVP

A0A2N9GMM2 Uncharacterized protein6.0e-2230.12Show/hide
Query:  WKFLWARQIPSKVKIFCWRLNHDFLPTEGLSLFIMQSIYCGGANRTCP-----QRILKGLWGCAGGPGIGGI----RMFL-----VLCALERWRGKREAV
        WK +W  ++P+K K F WR  +D LPT+   LF  Q +    A   C      +  L  LW C   P +  +     +FL     V       + K+  V
Subjt:  WKFLWARQIPSKVKIFCWRLNHDFLPTEGLSLFIMQSIYCGGANRTCP-----QRILKGLWGCAGGPGIGGI----RMFL-----VLCALERWRGKREAV

Query:  KWSPPIAPNYKLNTDAATDKELKLSSLGAIIRDEGGEVMLTWMKKVPFVQDVDVLEAMVVRNSLLVVKDGGFRQLEVESDSARVVWLLKSNGCDRSEVGM
        +W PP +  YK+N D A  +E     LG +IRD  G V+ T  +K+     V+++EA+  R ++L  K+ G    E E D+  V+  L S     +  G+
Subjt:  KWSPPIAPNYKLNTDAATDKELKLSSLGAIIRDEGGEVMLTWMKKVPFVQDVDVLEAMVVRNSLLVVKDGGFRQLEVESDSARVVWLLKSNGCDRSEVGM

Query:  IVDEIRQISKDFQSCSFSWCSRSRNVMTHKVVRAVLMNELNDVWIEEVP
        ++++ + + ++FQ  S S   RS N + H + R       + VW+EEVP
Subjt:  IVDEIRQISKDFQSCSFSWCSRSRNVMTHKVVRAVLMNELNDVWIEEVP

A0A2N9IT86 Uncharacterized protein8.4e-2428.24Show/hide
Query:  CSIKENGSNSNFDQVNQWWKFLWARQIPSKVKIFCWRLNHDFLPTEG--LSLFIMQSIYCGGANRTCPQRILKGLWGC---------------AGGPGIG
        C   E G  S+  ++ Q W  LW+  IP+K ++F WR  H+ LPT        I++   CG      P+  +  LW C                      
Subjt:  CSIKENGSNSNFDQVNQWWKFLWARQIPSKVKIFCWRLNHDFLPTEG--LSLFIMQSIYCGGANRTCPQRILKGLWGC---------------AGGPGIG

Query:  GIRMFLVLCAL-----------------------ERWRGKR--------EAVKWSPPIAPNYKLNTDAATDKELKLSSLGAIIRDEGGEVMLTWMKKVPF
        G    +  C L                        + R K+        E   W PP    YK+N D A  K+   + LG IIR+  GEVM +  +KVP 
Subjt:  GIRMFLVLCAL-----------------------ERWRGKR--------EAVKWSPPIAPNYKLNTDAATDKELKLSSLGAIIRDEGGEVMLTWMKKVPF

Query:  VQDVDVLEAMVVRNSLLVVKDGGFRQLEVESDSARVVWLLKSNGCDRSEVGMIVDEIRQISKDFQSCSFSWCSRSRNVMTHKVVRAVLMNELNDVWIEEV
           V+ +EA   R+++   KD GF  +++E DS  +V  L+      +  G I+D+I QI+K  QS  F    R  NVM H + +    N+  + W+E V
Subjt:  VQDVDVLEAMVVRNSLLVVKDGGFRQLEVESDSARVVWLLKSNGCDRSEVGMIVDEIRQISKDFQSCSFSWCSRSRNVMTHKVVRAVLMNELNDVWIEEV

Query:  P
        P
Subjt:  P

A0A2N9IYL5 RNase H domain-containing protein1.5e-2529.53Show/hide
Query:  LLACSIKENGSNSNFDQVNQWWKFLWARQIPSKVKIFCWRLNHDFLPTEG--LSLFIMQSIYCGGANRTCPQRILKGLWGCAGGPGIGGIRMFLVLCALE
        LL  S +E+  +S+  +++Q WK +W+  +P K++ F WR  H+ LPT+       I+    C   +    +  +  LW C     +       +    +
Subjt:  LLACSIKENGSNSNFDQVNQWWKFLWARQIPSKVKIFCWRLNHDFLPTEG--LSLFIMQSIYCGGANRTCPQRILKGLWGCAGGPGIGGIRMFLVLCALE

Query:  RWRGKREAVKWSPPIAPNYKLNTDAATDKELKLSSLGAIIRDEGGEVMLTWMKKVPFVQDVDVLEAMVVRNSLLVVKDGGFRQLEVESDSARVVWLLKSN
           G  E VKW+PP   +YK+N D A   +   + +G I+R+  GEVM +   ++PF   V+ LEA   R+++   KD GF +  +E DS  VV  L   
Subjt:  RWRGKREAVKWSPPIAPNYKLNTDAATDKELKLSSLGAIIRDEGGEVMLTWMKKVPFVQDVDVLEAMVVRNSLLVVKDGGFRQLEVESDSARVVWLLKSN

Query:  GCDRSEVGMIVDEIRQISKDFQSCSFSWCSRSRNVMTHKVVRAVLMNELNDVWI
            +  G I+D+I+QI++  QS  F    R  NVM H + +    N+  + W+
Subjt:  GCDRSEVGMIVDEIRQISKDFQSCSFSWCSRSRNVMTHKVVRAVLMNELNDVWI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGAAGCTTTATCTTCTTGCAACCTCAGTTCATTGAAGCAACAATGGGCAGTTGAACCCATAGAGTCTTCGGTCTTCAGACTTGGTGGAGTCTCTCTGAATTCTCT
GGTTCTGCTTGAGAGCTTTGAAAACTCTGAACTCTTGTCTTTGTTGGCTTGTTCAATTAAGGAAAATGGCAGCAACTCAAATTTTGATCAAGTTAATCAGTGGTGGAAGT
TTCTATGGGCTAGACAAATCCCAAGTAAGGTGAAGATATTCTGTTGGAGATTGAATCATGATTTTCTGCCAACAGAGGGCCTCAGTCTGTTCATAATGCAGTCGATTTAC
TGTGGTGGTGCAAATCGAACATGTCCGCAAAGGATTTTGAAGGGTTTGTGGGGATGTGCTGGTGGGCCTGGAATAGGAGGAATAAGGATGTTTTTGGTCCTATGTGCATT
GGAGAGATGGAGGGGGAAGAGGGAAGCCGTGAAGTGGTCTCCTCCCATTGCCCCAAATTATAAACTCAATACAGATGCAGCCACAGATAAAGAATTGAAATTAAGTAGCC
TAGGAGCTATTATCAGAGACGAAGGTGGGGAGGTGATGCTTACTTGGATGAAGAAAGTTCCCTTTGTGCAAGACGTTGATGTTTTAGAGGCAATGGTTGTTCGAAATAGC
TTGTTGGTGGTGAAAGATGGTGGTTTCCGGCAGTTGGAGGTGGAATCTGACTCGGCCCGTGTGGTGTGGTTGCTCAAATCGAATGGTTGCGACAGATCTGAGGTGGGTAT
GATTGTGGATGAAATTCGCCAAATCTCCAAGGACTTCCAGTCGTGTTCCTTTTCGTGGTGCTCCAGGTCGAGAAATGTAATGACCCATAAGGTTGTGAGAGCGGTGCTGA
TGAATGAGCTGAATGACGTGTGGATTGAAGAGGTGCCGGCGATTCTGCGTGTAGATCTTCAAGCTGAGCGGCGAGACAGTTCGAGGGTTGGGCAAGGGCTTTTAACCATT
ATTCAACCCACTACAGTAACTATCTCCTCACTTCTTCCATGCGACTCCTTGACTTTTCCGACGACTGCCGGCCGCCGTCAGCCGGCGAAGTTTCCGACGACCACCGACGA
CTTTTCCGGCGATCGCCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGATAGAAGCTTTATCTTCTTGCAACCTCAGTTCATTGAAGCAACAATGGGCAGTTGAACCCATAGAGTCTTCGGTCTTCAGACTTGGTGGAGTCTCTCTGAATTCTCT
GGTTCTGCTTGAGAGCTTTGAAAACTCTGAACTCTTGTCTTTGTTGGCTTGTTCAATTAAGGAAAATGGCAGCAACTCAAATTTTGATCAAGTTAATCAGTGGTGGAAGT
TTCTATGGGCTAGACAAATCCCAAGTAAGGTGAAGATATTCTGTTGGAGATTGAATCATGATTTTCTGCCAACAGAGGGCCTCAGTCTGTTCATAATGCAGTCGATTTAC
TGTGGTGGTGCAAATCGAACATGTCCGCAAAGGATTTTGAAGGGTTTGTGGGGATGTGCTGGTGGGCCTGGAATAGGAGGAATAAGGATGTTTTTGGTCCTATGTGCATT
GGAGAGATGGAGGGGGAAGAGGGAAGCCGTGAAGTGGTCTCCTCCCATTGCCCCAAATTATAAACTCAATACAGATGCAGCCACAGATAAAGAATTGAAATTAAGTAGCC
TAGGAGCTATTATCAGAGACGAAGGTGGGGAGGTGATGCTTACTTGGATGAAGAAAGTTCCCTTTGTGCAAGACGTTGATGTTTTAGAGGCAATGGTTGTTCGAAATAGC
TTGTTGGTGGTGAAAGATGGTGGTTTCCGGCAGTTGGAGGTGGAATCTGACTCGGCCCGTGTGGTGTGGTTGCTCAAATCGAATGGTTGCGACAGATCTGAGGTGGGTAT
GATTGTGGATGAAATTCGCCAAATCTCCAAGGACTTCCAGTCGTGTTCCTTTTCGTGGTGCTCCAGGTCGAGAAATGTAATGACCCATAAGGTTGTGAGAGCGGTGCTGA
TGAATGAGCTGAATGACGTGTGGATTGAAGAGGTGCCGGCGATTCTGCGTGTAGATCTTCAAGCTGAGCGGCGAGACAGTTCGAGGGTTGGGCAAGGGCTTTTAACCATT
ATTCAACCCACTACAGTAACTATCTCCTCACTTCTTCCATGCGACTCCTTGACTTTTCCGACGACTGCCGGCCGCCGTCAGCCGGCGAAGTTTCCGACGACCACCGACGA
CTTTTCCGGCGATCGCCGATGA
Protein sequenceShow/hide protein sequence
MIEALSSCNLSSLKQQWAVEPIESSVFRLGGVSLNSLVLLESFENSELLSLLACSIKENGSNSNFDQVNQWWKFLWARQIPSKVKIFCWRLNHDFLPTEGLSLFIMQSIY
CGGANRTCPQRILKGLWGCAGGPGIGGIRMFLVLCALERWRGKREAVKWSPPIAPNYKLNTDAATDKELKLSSLGAIIRDEGGEVMLTWMKKVPFVQDVDVLEAMVVRNS
LLVVKDGGFRQLEVESDSARVVWLLKSNGCDRSEVGMIVDEIRQISKDFQSCSFSWCSRSRNVMTHKVVRAVLMNELNDVWIEEVPAILRVDLQAERRDSSRVGQGLLTI
IQPTTVTISSLLPCDSLTFPTTAGRRQPAKFPTTTDDFSGDRR