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Lag0031402 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031402
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr11:7989989..7990668
RNA-Seq ExpressionLag0031402
SyntenyLag0031402
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022135942.1 uncharacterized protein LOC111007775 [Momordica charantia]3.4e-1140.35Show/hide
Query:  NIRDADFAEGIAASVGLRLAVGTATRPFVVETDSLRVSKLLRRDEEDVSELGMLLEDAVRGAPAGWFVGGSFTF--REGNRVAHRLARLAMEDRCDRVWM
        ++ D   AE +AA  G+ LA+     PF +ETDS +V  LLR D ED SE+G +L  ++R   +   +GG F+F  REGN  AH LAR+ M      VW+
Subjt:  NIRDADFAEGIAASVGLRLAVGTATRPFVVETDSLRVSKLLRRDEEDVSELGMLLEDAVRGAPAGWFVGGSFTF--REGNRVAHRLARLAMEDRCDRVWM

Query:  EEGPTCVSSLLAEE
        EE  + +S ++A +
Subjt:  EEGPTCVSSLLAEE

XP_022139684.1 uncharacterized protein LOC111010533 [Momordica charantia]9.1e-0940.43Show/hide
Query:  MENIRDADFAEGIAASVGLRLAVGTATRPFVVETDSLRVSKLLRRDEEDVSELGMLLEDAVRGAPAGWFVGGSFTFREGNRVAHRLARLAMEDR
        +E++   D AE +AA  GLR+A+ T   P ++ETDSLR+  L  RD+E +S+ G ++E           V  SFT R GN +AH LAR A++ +
Subjt:  MENIRDADFAEGIAASVGLRLAVGTATRPFVVETDSLRVSKLLRRDEEDVSELGMLLEDAVRGAPAGWFVGGSFTFREGNRVAHRLARLAMEDR

XP_022140628.1 uncharacterized protein LOC111011237 [Momordica charantia]7.5e-1138.14Show/hide
Query:  MENIRDADFAEGIAASVGLRLAVGTATRPFVVETDSLRVSKLLRRDEEDVSELGMLLEDAVRGAPAGWFVGGSFTFREGNRVAHRLARLAMEDRCDRVWM
        +ENI+  D AE I A  GL+LA      P ++ETDS R+  L  +  ED+SE G ++  A            +F  REGN+ AH LAR A+  R   +WM
Subjt:  MENIRDADFAEGIAASVGLRLAVGTATRPFVVETDSLRVSKLLRRDEEDVSELGMLLEDAVRGAPAGWFVGGSFTFREGNRVAHRLARLAMEDRCDRVWM

Query:  EEGPTCVSSLLAEEVVHE
        E+ P  + S L  E + E
Subjt:  EEGPTCVSSLLAEEVVHE

XP_022150944.1 uncharacterized protein LOC111018973 [Momordica charantia]4.5e-0841.67Show/hide
Query:  DADFAEGIAASVGLRLAVGTATRPFVVETDSLRVSKLLRRDEEDVSELGMLLE-DAVRGAPAGWFVGGSFTFREGNRVAHRLARLAMEDRCDRVWMEEGP
        D D+ EG A   G+ LAV      F +ETDSLR+  LL  D  D SE+G+L     +  +     V  SFT R GN  AH LA+LA+     ++W+EE P
Subjt:  DADFAEGIAASVGLRLAVGTATRPFVVETDSLRVSKLLRRDEEDVSELGMLLE-DAVRGAPAGWFVGGSFTFREGNRVAHRLARLAMEDRCDRVWMEEGP

Query:  TCVSSLLA
          +SS+LA
Subjt:  TCVSSLLA

XP_030970599.1 uncharacterized protein LOC115990979 [Quercus lobata]1.0e-0737.84Show/hide
Query:  ADFAEGIAASVGLRLAVGTATRPFVVETDSLRVSKLLRRDEEDVSELGMLLEDAVRGAPAGWFVGGSFTFREGNRVAHRLARLAMEDRCDRVWMEEGPTC
        A+  E +AA   L+LA     +  ++E DSL + K L+ D+ ++S LG+L+ED    A     +  S   R GN VAH LA+ A+     +VWME+ P+ 
Subjt:  ADFAEGIAASVGLRLAVGTATRPFVVETDSLRVSKLLRRDEEDVSELGMLLEDAVRGAPAGWFVGGSFTFREGNRVAHRLARLAMEDRCDRVWMEEGPTC

Query:  VSSLLAEEVVH
        V S L  +VVH
Subjt:  VSSLLAEEVVH

TrEMBL top hitse value%identityAlignment
A0A6J1C467 uncharacterized protein LOC1110077751.6e-1140.35Show/hide
Query:  NIRDADFAEGIAASVGLRLAVGTATRPFVVETDSLRVSKLLRRDEEDVSELGMLLEDAVRGAPAGWFVGGSFTF--REGNRVAHRLARLAMEDRCDRVWM
        ++ D   AE +AA  G+ LA+     PF +ETDS +V  LLR D ED SE+G +L  ++R   +   +GG F+F  REGN  AH LAR+ M      VW+
Subjt:  NIRDADFAEGIAASVGLRLAVGTATRPFVVETDSLRVSKLLRRDEEDVSELGMLLEDAVRGAPAGWFVGGSFTF--REGNRVAHRLARLAMEDRCDRVWM

Query:  EEGPTCVSSLLAEE
        EE  + +S ++A +
Subjt:  EEGPTCVSSLLAEE

A0A6J1CDQ4 uncharacterized protein LOC1110105334.4e-0940.43Show/hide
Query:  MENIRDADFAEGIAASVGLRLAVGTATRPFVVETDSLRVSKLLRRDEEDVSELGMLLEDAVRGAPAGWFVGGSFTFREGNRVAHRLARLAMEDR
        +E++   D AE +AA  GLR+A+ T   P ++ETDSLR+  L  RD+E +S+ G ++E           V  SFT R GN +AH LAR A++ +
Subjt:  MENIRDADFAEGIAASVGLRLAVGTATRPFVVETDSLRVSKLLRRDEEDVSELGMLLEDAVRGAPAGWFVGGSFTFREGNRVAHRLARLAMEDR

A0A6J1CIF1 uncharacterized protein LOC1110112373.6e-1138.14Show/hide
Query:  MENIRDADFAEGIAASVGLRLAVGTATRPFVVETDSLRVSKLLRRDEEDVSELGMLLEDAVRGAPAGWFVGGSFTFREGNRVAHRLARLAMEDRCDRVWM
        +ENI+  D AE I A  GL+LA      P ++ETDS R+  L  +  ED+SE G ++  A            +F  REGN+ AH LAR A+  R   +WM
Subjt:  MENIRDADFAEGIAASVGLRLAVGTATRPFVVETDSLRVSKLLRRDEEDVSELGMLLEDAVRGAPAGWFVGGSFTFREGNRVAHRLARLAMEDRCDRVWM

Query:  EEGPTCVSSLLAEEVVHE
        E+ P  + S L  E + E
Subjt:  EEGPTCVSSLLAEEVVHE

A0A803N2H0 Uncharacterized protein9.8e-0936.94Show/hide
Query:  MENIRDADFAEGIAASVGLRLAVGTATRPFVVETDSLRVSKLLRRDEEDVSELGMLLEDAVRGAPAGWFVGGSFTFREGNRVAHRLARLAMEDRCDRVWM
        +E   +   AE  A  +GLR A+    R   VE+D L +   ++  E   S L ++L+D    +    FV  SFT REGN+VAH LA     D   RVW 
Subjt:  MENIRDADFAEGIAASVGLRLAVGTATRPFVVETDSLRVSKLLRRDEEDVSELGMLLEDAVRGAPAGWFVGGSFTFREGNRVAHRLARLAMEDRCDRVWM

Query:  EEGPTCVSSLL
           P+C+ SLL
Subjt:  EEGPTCVSSLL

A0A803PAX6 Uncharacterized protein7.5e-0934.23Show/hide
Query:  DFAEGIAASVGLRLAVGTATRPFVVETDSLRVSKLLRRDEEDVSELGMLLEDAVRGAPAGWFV---GGSFTFREGNRVAHRLARLAMEDRCDRVWMEEGP
        + AE +A  +G+ LAV T+  PF++++D LRV + ++   +  ++ G LL++     PA  FV     S T R  NRVAH LA+LA+  +C+++W    P
Subjt:  DFAEGIAASVGLRLAVGTATRPFVVETDSLRVSKLLRRDEEDVSELGMLLEDAVRGAPAGWFV---GGSFTFREGNRVAHRLARLAMEDRCDRVWMEEGP

Query:  TCVSSLLAEEV
        +C S+ +  ++
Subjt:  TCVSSLLAEEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACATTAGAGATGCAGATTTTGCAGAAGGGATAGCGGCCTCAGTCGGCTTGAGGCTTGCGGTGGGGACGGCTACCAGACCTTTTGTGGTGGAGACAGACTCTTT
GAGGGTGTCCAAGCTGCTGCGGCGCGATGAGGAGGACGTGTCGGAGTTGGGGATGCTGTTGGAGGATGCGGTGAGGGGTGCTCCAGCGGGGTGGTTTGTTGGGGGCAGTT
TTACGTTCAGGGAAGGTAACCGTGTTGCCCATCGTTTGGCGAGGTTGGCGATGGAGGACAGATGTGACCGAGTGTGGATGGAAGAGGGCCCGACGTGTGTTTCGAGCTTG
TTGGCTGAAGAGGTAGTGCATGAGTTTCCTCAGGCAAGGAGGGGAGCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAACATTAGAGATGCAGATTTTGCAGAAGGGATAGCGGCCTCAGTCGGCTTGAGGCTTGCGGTGGGGACGGCTACCAGACCTTTTGTGGTGGAGACAGACTCTTT
GAGGGTGTCCAAGCTGCTGCGGCGCGATGAGGAGGACGTGTCGGAGTTGGGGATGCTGTTGGAGGATGCGGTGAGGGGTGCTCCAGCGGGGTGGTTTGTTGGGGGCAGTT
TTACGTTCAGGGAAGGTAACCGTGTTGCCCATCGTTTGGCGAGGTTGGCGATGGAGGACAGATGTGACCGAGTGTGGATGGAAGAGGGCCCGACGTGTGTTTCGAGCTTG
TTGGCTGAAGAGGTAGTGCATGAGTTTCCTCAGGCAAGGAGGGGAGCGTGA
Protein sequenceShow/hide protein sequence
MENIRDADFAEGIAASVGLRLAVGTATRPFVVETDSLRVSKLLRRDEEDVSELGMLLEDAVRGAPAGWFVGGSFTFREGNRVAHRLARLAMEDRCDRVWMEEGPTCVSSL
LAEEVVHEFPQARRGA