; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0031430 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031430
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionMediator of RNA polymerase II transcription subunit 6
Genome locationchr11:8392124..8395059
RNA-Seq ExpressionLag0031430
SyntenyLag0031430
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0016592 - mediator complex (cellular component)
GO:0070847 - core mediator complex (cellular component)
GO:0003713 - transcription coactivator activity (molecular function)
InterPro domainsIPR007018 - Mediator complex, subunit Med6
IPR016820 - Mediator complex, subunit Med6, metazoa/plant
IPR038566 - Mediator complex, subunit Med6 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606737.1 Mediator of RNA polymerase II transcription subunit 6, partial [Cucurbita argyrosperma subsp. sororia]2.0e-13295.67Show/hide
Query:  MATPPPPAPPPGIGNFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME
        MATP    PPPGIGNFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG EYMLNEVME
Subjt:  MATPPPPAPPPGIGNFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETIDFKEVKRVDRILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENE+EEVKP K TIDFKEVKRVDRILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETIDFKEVKRVDRILASLQ

Query:  RKLPPAPPPPPFPEGYVPAPASEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF
        RKLPPAPPPPPFPEGYVPAPASEAEKGPE+QQGE QQP ADPIIDQGPAKRMKF
Subjt:  RKLPPAPPPPPFPEGYVPAPASEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF

XP_022148297.1 mediator of RNA polymerase II transcription subunit 6 [Momordica charantia]1.4e-13395.67Show/hide
Query:  MATPPPPAPPPGIGNFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME
        MATPPPPA PPGI NFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME
Subjt:  MATPPPPAPPPGIGNFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETIDFKEVKRVDRILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETI+FKEVKRVD ILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETIDFKEVKRVDRILASLQ

Query:  RKLPPAPPPPPFPEGYVPAPASEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF
        RKLPPAPPPPPFPEGYVPAP +E EKGPENQ  E QQP ADPIIDQGPAKRMKF
Subjt:  RKLPPAPPPPPFPEGYVPAPASEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF

XP_022948318.1 mediator of RNA polymerase II transcription subunit 6 [Cucurbita moschata]2.0e-13296.06Show/hide
Query:  MATPPPPAPPPGIGNFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME
        MATP    PPPGIGNFEGGPP AAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG EYMLNEVME
Subjt:  MATPPPPAPPPGIGNFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETIDFKEVKRVDRILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKP KETIDFKEVKRVDRILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETIDFKEVKRVDRILASLQ

Query:  RKLPPAPPPPPFPEGYVPAPASEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF
        RKLPPAPPPPPFPEGYVPAPASEAEKGPE+QQGE QQP ADPIIDQGPAKRMKF
Subjt:  RKLPPAPPPPPFPEGYVPAPASEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF

XP_022998637.1 mediator of RNA polymerase II transcription subunit 6 [Cucurbita maxima]1.7e-13195.28Show/hide
Query:  MATPPPPAPPPGIGNFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME
        MATP    PPPGIGNFEGGPPPAAPQ PGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG EYMLNEVME
Subjt:  MATPPPPAPPPGIGNFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETIDFKEVKRVDRILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESE+VKP K TIDFKEVKRVDRILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETIDFKEVKRVDRILASLQ

Query:  RKLPPAPPPPPFPEGYVPAPASEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF
        RKLPPAPPPPPFPEGYVPAPASEAEKGPE+QQGE QQP ADPIIDQGPAKRMKF
Subjt:  RKLPPAPPPPPFPEGYVPAPASEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF

XP_023524903.1 mediator of RNA polymerase II transcription subunit 6 [Cucurbita pepo subsp. pepo]9.1e-13396.06Show/hide
Query:  MATPPPPAPPPGIGNFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME
        MATP    PPPGIGNFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG EYMLNEVME
Subjt:  MATPPPPAPPPGIGNFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETIDFKEVKRVDRILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKP K TIDFKEVKRVDRILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETIDFKEVKRVDRILASLQ

Query:  RKLPPAPPPPPFPEGYVPAPASEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF
        RKLPPAPPPPPFPEGYVPAPASEAEKGPE+QQGE QQP ADPIIDQGPAKRMKF
Subjt:  RKLPPAPPPPPFPEGYVPAPASEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF

TrEMBL top hitse value%identityAlignment
A0A0A0L8C2 Mediator of RNA polymerase II transcription subunit 61.2e-13093.7Show/hide
Query:  MATPPPPAPPPGIGNFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME
        MATPPPP  PPG GNFEGGP PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG EYMLNEVME
Subjt:  MATPPPPAPPPGIGNFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETIDFKEVKRVDRILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLC+VFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKP KETI+FKEVKRVD ILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETIDFKEVKRVDRILASLQ

Query:  RKLPPAPPPPPFPEGYVPAPASEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF
        RKLPPAPPPPPFPEGY PA  +E EKGPENQQGE QQP ADPIIDQGPAKRMKF
Subjt:  RKLPPAPPPPPFPEGYVPAPASEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF

A0A5D3CDR8 Mediator of RNA polymerase II transcription subunit 61.6e-13093.73Show/hide
Query:  MATPPPP-APPPGIGNFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVM
        MATPPPP   PPG GNFEGGP PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG EYMLNEVM
Subjt:  MATPPPP-APPPGIGNFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVM

Query:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETIDFKEVKRVDRILASL
        EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKP KETI+FKEVKRVD ILASL
Subjt:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETIDFKEVKRVDRILASL

Query:  QRKLPPAPPPPPFPEGYVPAPASEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF
        QRKLPPAPPPPPFPEGY PAP ++ EKGPENQQGE QQP ADPIIDQGPAKRMKF
Subjt:  QRKLPPAPPPPPFPEGYVPAPASEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF

A0A6J1D4P7 Mediator of RNA polymerase II transcription subunit 66.8e-13495.67Show/hide
Query:  MATPPPPAPPPGIGNFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME
        MATPPPPA PPGI NFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME
Subjt:  MATPPPPAPPPGIGNFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETIDFKEVKRVDRILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETI+FKEVKRVD ILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETIDFKEVKRVDRILASLQ

Query:  RKLPPAPPPPPFPEGYVPAPASEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF
        RKLPPAPPPPPFPEGYVPAP +E EKGPENQ  E QQP ADPIIDQGPAKRMKF
Subjt:  RKLPPAPPPPPFPEGYVPAPASEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF

A0A6J1G911 Mediator of RNA polymerase II transcription subunit 69.8e-13396.06Show/hide
Query:  MATPPPPAPPPGIGNFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME
        MATP    PPPGIGNFEGGPP AAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG EYMLNEVME
Subjt:  MATPPPPAPPPGIGNFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETIDFKEVKRVDRILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKP KETIDFKEVKRVDRILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETIDFKEVKRVDRILASLQ

Query:  RKLPPAPPPPPFPEGYVPAPASEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF
        RKLPPAPPPPPFPEGYVPAPASEAEKGPE+QQGE QQP ADPIIDQGPAKRMKF
Subjt:  RKLPPAPPPPPFPEGYVPAPASEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF

A0A6J1K8I9 Mediator of RNA polymerase II transcription subunit 68.3e-13295.28Show/hide
Query:  MATPPPPAPPPGIGNFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME
        MATP    PPPGIGNFEGGPPPAAPQ PGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG EYMLNEVME
Subjt:  MATPPPPAPPPGIGNFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETIDFKEVKRVDRILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESE+VKP K TIDFKEVKRVDRILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETIDFKEVKRVDRILASLQ

Query:  RKLPPAPPPPPFPEGYVPAPASEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF
        RKLPPAPPPPPFPEGYVPAPASEAEKGPE+QQGE QQP ADPIIDQGPAKRMKF
Subjt:  RKLPPAPPPPPFPEGYVPAPASEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF

SwissProt top hitse value%identityAlignment
F4IXJ7 Mediator of RNA polymerase II transcription subunit 61.1e-8562.95Show/hide
Query:  PPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTP
        PPP   QPPGTDMTGI FRDQLW+N+YPLDRN +FDYFALSPFYD TCNNE LR RSIHPLDLS LSKMTG EYML +  EP+LFVFRKQKRDGPEKVTP
Subjt:  PPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTP

Query:  MLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKI-------------------------------------GY------VDSENESEE
        MLTYYILDGSIYQAPQLC+VFAARVSR +Y ISKAFT A+SKLE I                                     G+       +++NE  E
Subjt:  MLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKI-------------------------------------GY------VDSENESEE

Query:  VKPGKETIDFKEVKRVDRILASLQRKLPPAPPPPPFPEGYVPAPASEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF
         KP  ET+D KE+KRVD IL SL RKL P PPPPPFPEGYV   A   ++    Q GE Q P  DPIIDQGPAKRMKF
Subjt:  VKPGKETIDFKEVKRVDRILASLQRKLPPAPPPPPFPEGYVPAPASEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF

Q3SZY9 Mediator of RNA polymerase II transcription subunit 61.5e-2135.68Show/hide
Query:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG
        ++ GI + D  W+    L+   V DYF+   +PFYD TCNNE ++M+    L L  L++M G EY+L    EP LF+ RKQ+R  P +V P+  YYI+ G
Subjt:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG

Query:  SIYQAPQLCNVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVKP----GKETIDFKEVKRVDRILASLQRKLPPAPPPPPFPEGYVP
         IYQAP L +V  +RV  A++ I  AF  A S        GY        E ++VKP     +E     + +RVD +L  L++K PP        E  VP
Subjt:  SIYQAPQLCNVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVKP----GKETIDFKEVKRVDRILASLQRKLPPAPPPPPFPEGYVP

Query:  APAS--EAEKGPENQQGEPQQPPADPIIDQG----PAKRMK
           +  EAE  PE  + E ++   +     G    P KRM+
Subjt:  APAS--EAEKGPENQQGEPQQPPADPIIDQG----PAKRMK

Q54PN3 Putative mediator of RNA polymerase II transcription subunit 62.4e-2739.27Show/hide
Query:  DMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDGSI
        D+T + +RD LWL  YPL+   +  YF+ S FYD  CNNEQL+M+    LDLS L  M G EY L + +EP  F+  KQ R  P  V     YY+++G+I
Subjt:  DMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDGSI

Query:  YQAPQLCNVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVK-PGKETIDFKEVKRVDRILASLQRKLPPAPPPPPFPE
        YQAP+L  VF +RVS+++ ++S+AF + SS +      GY   +D  N+ E+ K         ++ KR+D+++ SL  K P    P   P+
Subjt:  YQAPQLCNVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVK-PGKETIDFKEVKRVDRILASLQRKLPPAPPPPPFPE

Q5RD94 Mediator of RNA polymerase II transcription subunit 63.4e-2134.02Show/hide
Query:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG
        ++ GI + D  W+    L+   V DYF+   +PFYD TCNNE ++M+    L L  L++M G EY+L    EP LF+ RKQ+R  P +V P+  YYI+ G
Subjt:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG

Query:  SIYQAPQLCNVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVKP----GKETIDFKEVKRVDRILASLQRKLPPAPPPPPFPEGYVP
         IYQAP L +V  +RV  A++ I  AF  A S        GY        E ++V+P     +E     + +RVD +L  L++K PP        E  VP
Subjt:  SIYQAPQLCNVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVKP----GKETIDFKEVKRVDRILASLQRKLPPAPPPPPFPEGYVP

Query:  APASEAEKGPENQQGEPQQPPADPIIDQ------GPAKRMK
           ++ E  P  +  +P++      + Q       P KRM+
Subjt:  APASEAEKGPENQQGEPQQPPADPIIDQ------GPAKRMK

Q921D4 Mediator of RNA polymerase II transcription subunit 68.8e-2236.1Show/hide
Query:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG
        ++ GI + D  W+    L+   V DYF+   +PFYD TCNNE ++M+    L L  L++M G EY+L    EP LF+ RKQ+R  P +V P+  YYI+ G
Subjt:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG

Query:  SIYQAPQLCNVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVKP----GKETIDFKEVKRVDRILASLQRKLPPAPPPPPFPEGYVP
         IYQAP L +V  +RV  A++ I  AF  A S        GY        E E+VKP     +E     + +RVD +L  L++K PP        E  VP
Subjt:  SIYQAPQLCNVFAARVSRALYYISKAFTTASSKLE---KIGY---VDSENESEEVKP----GKETIDFKEVKRVDRILASLQRKLPPAPPPPPFPEGYVP

Query:  APAS--EAEKGPENQQGEPQQPPAD---PIIDQG-PAKRMK
           +  EAE  PE  + E ++   +    +  +G P KRM+
Subjt:  APAS--EAEKGPENQQGEPQQPPAD---PIIDQG-PAKRMK

Arabidopsis top hitse value%identityAlignment
AT3G21350.1 RNA polymerase transcriptional regulation mediator-related2.6e-9374.68Show/hide
Query:  PPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTP
        PPP   QPPGTDMTGI FRDQLW+N+YPLDRN +FDYFALSPFYD TCNNE LR RSIHPLDLS LSKMTG EYML +  EP+LFVFRKQKRDGPEKVTP
Subjt:  PPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTP

Query:  MLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESE--EVKPGKETIDFKEVKRVDRILASLQRKLPPAPPPPPFPEGYV
        MLTYYILDGSIYQAPQLC+VFAARVSR +Y ISKAFT A+SKLE I  VD+EN++E  E KP  ET+D KE+KRVD IL SL RKL P PPPPPFPEGYV
Subjt:  MLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESE--EVKPGKETIDFKEVKRVDRILASLQRKLPPAPPPPPFPEGYV

Query:  PAPASEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF
           A   ++    Q GE Q P  DPIIDQGPAKRMKF
Subjt:  PAPASEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF

AT3G21350.2 RNA polymerase transcriptional regulation mediator-related8.0e-8762.95Show/hide
Query:  PPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTP
        PPP   QPPGTDMTGI FRDQLW+N+YPLDRN +FDYFALSPFYD TCNNE LR RSIHPLDLS LSKMTG EYML +  EP+LFVFRKQKRDGPEKVTP
Subjt:  PPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQKRDGPEKVTP

Query:  MLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKI-------------------------------------GY------VDSENESEE
        MLTYYILDGSIYQAPQLC+VFAARVSR +Y ISKAFT A+SKLE I                                     G+       +++NE  E
Subjt:  MLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKI-------------------------------------GY------VDSENESEE

Query:  VKPGKETIDFKEVKRVDRILASLQRKLPPAPPPPPFPEGYVPAPASEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF
         KP  ET+D KE+KRVD IL SL RKL P PPPPPFPEGYV   A   ++    Q GE Q P  DPIIDQGPAKRMKF
Subjt:  VKPGKETIDFKEVKRVDRILASLQRKLPPAPPPPPFPEGYVPAPASEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACTCCACCGCCACCCGCGCCGCCGCCGGGGATCGGGAATTTTGAAGGGGGACCACCGCCGGCAGCGCCCCAGCCGCCAGGGACGGACATGACCGGAATTTGCTT
CAGAGACCAGCTGTGGCTCAATACTTACCCTCTTGATCGGAACTTGGTTTTCGATTACTTCGCCTTGTCTCCTTTCTACGACTGGACTTGTAACAACGAACAACTCAGAA
TGCGCTCCATTCACCCCCTCGATCTCTCTCAACTCTCAAAAATGACAGGTACAGAGTACATGCTGAATGAAGTTATGGAGCCTCACCTTTTTGTTTTCCGAAAGCAAAAG
AGGGATGGTCCTGAGAAAGTCACACCAATGTTGACTTATTATATCTTGGATGGTTCTATTTATCAGGCGCCTCAGCTTTGCAATGTTTTTGCTGCCCGAGTTAGCCGGGC
ACTATATTACATATCGAAGGCCTTTACCACTGCTTCCTCGAAGTTGGAGAAGATCGGATATGTTGATTCCGAAAATGAGAGTGAAGAAGTAAAACCTGGAAAAGAGACCA
TTGATTTTAAGGAAGTAAAGCGAGTTGATCGCATTCTTGCATCCTTGCAGCGCAAGCTGCCACCTGCCCCACCACCCCCACCGTTTCCAGAAGGTTATGTTCCTGCTCCC
GCATCAGAAGCAGAAAAAGGCCCTGAAAACCAGCAAGGAGAGCCGCAACAGCCTCCAGCAGATCCCATTATTGATCAAGGCCCAGCTAAAAGGATGAAATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTACTCCACCGCCACCCGCGCCGCCGCCGGGGATCGGGAATTTTGAAGGGGGACCACCGCCGGCAGCGCCCCAGCCGCCAGGGACGGACATGACCGGAATTTGCTT
CAGAGACCAGCTGTGGCTCAATACTTACCCTCTTGATCGGAACTTGGTTTTCGATTACTTCGCCTTGTCTCCTTTCTACGACTGGACTTGTAACAACGAACAACTCAGAA
TGCGCTCCATTCACCCCCTCGATCTCTCTCAACTCTCAAAAATGACAGGTACAGAGTACATGCTGAATGAAGTTATGGAGCCTCACCTTTTTGTTTTCCGAAAGCAAAAG
AGGGATGGTCCTGAGAAAGTCACACCAATGTTGACTTATTATATCTTGGATGGTTCTATTTATCAGGCGCCTCAGCTTTGCAATGTTTTTGCTGCCCGAGTTAGCCGGGC
ACTATATTACATATCGAAGGCCTTTACCACTGCTTCCTCGAAGTTGGAGAAGATCGGATATGTTGATTCCGAAAATGAGAGTGAAGAAGTAAAACCTGGAAAAGAGACCA
TTGATTTTAAGGAAGTAAAGCGAGTTGATCGCATTCTTGCATCCTTGCAGCGCAAGCTGCCACCTGCCCCACCACCCCCACCGTTTCCAGAAGGTTATGTTCCTGCTCCC
GCATCAGAAGCAGAAAAAGGCCCTGAAAACCAGCAAGGAGAGCCGCAACAGCCTCCAGCAGATCCCATTATTGATCAAGGCCCAGCTAAAAGGATGAAATTTTGA
Protein sequenceShow/hide protein sequence
MATPPPPAPPPGIGNFEGGPPPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGTEYMLNEVMEPHLFVFRKQK
RDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDSENESEEVKPGKETIDFKEVKRVDRILASLQRKLPPAPPPPPFPEGYVPAP
ASEAEKGPENQQGEPQQPPADPIIDQGPAKRMKF