; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0031442 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031442
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon protein
Genome locationchr11:8518015..8519558
RNA-Seq ExpressionLag0031442
SyntenyLag0031442
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34114.1 retrotransposon protein [Cucumis melo subsp. melo]1.7e-9051.38Show/hide
Query:  TVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVRTQFARSGESVSRHFNTVLHVVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLGALDGTYIKVNVVLS
        T+AGL+STEVVDVEEMVAMFLHI+AHDVK+RV++ +F RSGE++SRHFN VL  V+RLH+ LLKKP+PV   CTD RW+WF+NCLGALDGTYIKVNV  S
Subjt:  TVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVRTQFARSGESVSRHFNTVLHVVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLGALDGTYIKVNVVLS

Query:  ----------------------------IARGWEGSAADSRVLRDAISRPNGLTVPKGYYYLCDAGYPNAEGFLAPYRGERYHLSEWR------------
                                    +  GWEGSAADSR+LRDA+SRPN L VPKGYYYL D GYPNAEGFLAPYRG+RYHL EWR            
Subjt:  ----------------------------IARGWEGSAADSRVLRDAISRPNGLTVPKGYYYLCDAGYPNAEGFLAPYRGERYHLSEWR------------

Query:  --------------------GRWAILRGKSYYPVRIQGGPSQHAAYFTILLIERWVT-------------------------VKFLMSWMRWILLLLQLM
                            GRWAILRGKSYYPV +Q   +  A      LI R +T                         ++    W +W   L + +
Subjt:  --------------------GRWAILRGKSYYPVRIQGGPSQHAAYFTILLIERWVT-------------------------VKFLMSWMRWILLLLQLM

Query:  NASSSRAPKHIWTKNEDAKLVESLVSLVHAGGWRSDNGTFKAGYLGQLENLMREKLPGQTFH
          SSSR PKH WTK E+A LVE LV LV+AGGWRSDNGTF+ GYL QL  +M  K+PG   H
Subjt:  NASSSRAPKHIWTKNEDAKLVESLVSLVHAGGWRSDNGTFKAGYLGQLENLMREKLPGQTFH

KAA0034843.1 retrotransposon protein [Cucumis melo var. makuwa]3.0e-9555.37Show/hide
Query:  MDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVRTQFARSGESVSRHFNTVLHVVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLG
        MDRRCFAILC LL+T+AGL+STEVVDVEEMVAMFLHI+AHDVKNRV++ +F RSGE++SRHFN VL  V+RLHD LLKKP+PV   CTD RW+WF+NCLG
Subjt:  MDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVRTQFARSGESVSRHFNTVLHVVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLG

Query:  ALDGTYIKVNVVLS----------------------------IARGWEGSAADSRVLRDAISRPNGLTVPKGYYYLCDAGYPNAEGFLAPYRGERYHLSE
        ALDGTYIKVNV  S                            +  GWEGSAADSR+LRDA+SRPN L VPKGYYYL DAGYPNAEGFLAPYRG+RYHL E
Subjt:  ALDGTYIKVNVVLS----------------------------IARGWEGSAADSRVLRDAISRPNGLTVPKGYYYLCDAGYPNAEGFLAPYRGERYHLSE

Query:  WR--------------------------------GRWAILRGKSYYPVRIQGGPSQHAAYFTIL---LIERWVTVKFLMSWMRWILLLLQLMNASSSRAP
        WR                                GRWAILRGKSY+PV +Q     H      L   LI R +T   +   +        +   SSSR P
Subjt:  WR--------------------------------GRWAILRGKSYYPVRIQGGPSQHAAYFTIL---LIERWVTVKFLMSWMRWILLLLQLMNASSSRAP

Query:  KHIWTKNEDAKLVESLVSLVHAGGWRSDNGTFKAGYLGQLENLMREKLPGQTFH
        KH WTK E+A LVE    LV+AGGWRSDNGTF+ GYL QL  +M  K+PG   H
Subjt:  KHIWTKNEDAKLVESLVSLVHAGGWRSDNGTFKAGYLGQLENLMREKLPGQTFH

KAA0036474.1 retrotransposon protein [Cucumis melo var. makuwa]4.5e-9151.99Show/hide
Query:  MDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVRTQFARSGESVSRHFNTVLHVVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLG
        MDRR FAILC LL+ VAGLSSTE+VDVEEMVAMFLHI AHDVKNRV++ +F RSGE+VSRHFN VL  VLRL++ L+K+P PVT++C D RWK F+NCLG
Subjt:  MDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVRTQFARSGESVSRHFNTVLHVVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLG

Query:  ALDGTYIKVNV----------------------------VLSIARGWEGSAADSRVLRDAISRPNGLTVPKGYYYLCDAGYPNAEGFLAPYRGERYHLSE
        ALDGTYIKVNV                             + +  GW+GSAADSR+LRDAISR NGL VPKGYYYLCDAGYPNAEGFLAPYRG+RYHL E
Subjt:  ALDGTYIKVNV----------------------------VLSIARGWEGSAADSRVLRDAISRPNGLTVPKGYYYLCDAGYPNAEGFLAPYRGERYHLSE

Query:  WR--------------------------------GRWAILRGKS--YYPVRIQGGPSQHAAYFTILLIERWVTVKFLMSWMRW-----ILLLLQLMNASS
        WR                                GRWAILRGKS   Y   ++      + Y T    E    ++    W +W       + +    ++S
Subjt:  WR--------------------------------GRWAILRGKS--YYPVRIQGGPSQHAAYFTILLIERWVTVKFLMSWMRW-----ILLLLQLMNASS

Query:  SRAPKHIWTKNEDAKLVESLVSLVHAGGWRSDNGTFKAGYLGQLENLMREKL
        +RAP+H+WT+ E+  LVE L+ LV  GGW+SDNGTF++GYL QL  +M EKL
Subjt:  SRAPKHIWTKNEDAKLVESLVSLVHAGGWRSDNGTFKAGYLGQLENLMREKL

KAA0065306.1 retrotransposon protein [Cucumis melo var. makuwa]5.5e-8148.36Show/hide
Query:  MDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVRTQFARSGESVSRHFNTVLHVVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLG
        MDRRCF ILCT+L+T  GL +T+ VDVEEM+A+FLHIVAHDVKNRV R  FARSGE+VSRHFN     VLRLH++LLK+P+PVT SC+  +W+WFQ CLG
Subjt:  MDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVRTQFARSGESVSRHFNTVLHVVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLG

Query:  ALDGTYIKVNVVLS----------------------------IARGWEGSAADSRVLRDAISRPNGLTVPKGYYYLCDAGYPNAEGFLAPYRGERYHLSE
        ALDGT+IKVNV +S                            +  GWEGSA+DSRVLRDA+SR  GL VPKGYYYLCDAGYPNAEGFLAPYRG+RYHL+E
Subjt:  ALDGTYIKVNVVLS----------------------------IARGWEGSAADSRVLRDAISRPNGLTVPKGYYYLCDAGYPNAEGFLAPYRGERYHLSE

Query:  WRG-------------------------------RWAILRGKSYYPVRIQ------------------------GGPSQHAAYFTILLIERWVTVKFLMS
        WRG                               RW IL+G+SYY V IQ                          P       + + IE    V+    
Subjt:  WRG-------------------------------RWAILRGKSYYPVRIQ------------------------GGPSQHAAYFTILLIERWVTVKFLMS

Query:  WMRWILLLLQL-------MNASSSRAPKHIWTKNEDAKLVESLVSLVHAGGWRSDNGTFKAGYLGQ
        W  W   L          M + +S+A KH WT  ED  LVE L+ LV  GGWR+DNGTFK  YL Q
Subjt:  WMRWILLLLQL-------MNASSSRAPKHIWTKNEDAKLVESLVSLVHAGGWRSDNGTFKAGYLGQ

TYK02751.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]3.7e-8555.27Show/hide
Query:  MDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVRTQFARSGESVSRHFNTVLHVVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLG
        MDRRCF ILC LL+TVAGL+S EVVDVEEMVAMFLHIVAHDVKNRV++ +F RSGE++SRHFN VL VV+RLHD LLKKP+PV   CTD RW+WF+NCLG
Subjt:  MDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVRTQFARSGESVSRHFNTVLHVVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLG

Query:  ALDGTYIKVNVVLS----------------------------IARGWEGSAADSRVLRDAISRPNGLTVPKGYYYLCDAGYPNAEGFLAPYRGERYHLSE
        ALDGTYIKVNV  S                            +  GWEGSAADSR+L DAISRPNGL VPKGYYYL DAGYPN +GFLA YRG+RYHL E
Subjt:  ALDGTYIKVNVVLS----------------------------IARGWEGSAADSRVLRDAISRPNGLTVPKGYYYLCDAGYPNAEGFLAPYRGERYHLSE

Query:  WRGRWAILRGKSYYPVRIQGGPSQHAAYFTILLIERWVTVKFLMSWMRWILLLLQLMNASSSRAPKHIWTKNEDAKLVESLVSLVHAGGWRSDNGTFKAG
        WRG              ++  PS    +F                           M  SS+R      TK E+A LVE LV LV+ GGWRSDNGTF  G
Subjt:  WRGRWAILRGKSYYPVRIQGGPSQHAAYFTILLIERWVTVKFLMSWMRWILLLLQLMNASSSRAPKHIWTKNEDAKLVESLVSLVHAGGWRSDNGTFKAG

Query:  YLGQLENLMREKL
        YL QL  +M  K+
Subjt:  YLGQLENLMREKL

TrEMBL top hitse value%identityAlignment
A0A5A7SWD8 Retrotransposon protein1.5e-9555.37Show/hide
Query:  MDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVRTQFARSGESVSRHFNTVLHVVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLG
        MDRRCFAILC LL+T+AGL+STEVVDVEEMVAMFLHI+AHDVKNRV++ +F RSGE++SRHFN VL  V+RLHD LLKKP+PV   CTD RW+WF+NCLG
Subjt:  MDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVRTQFARSGESVSRHFNTVLHVVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLG

Query:  ALDGTYIKVNVVLS----------------------------IARGWEGSAADSRVLRDAISRPNGLTVPKGYYYLCDAGYPNAEGFLAPYRGERYHLSE
        ALDGTYIKVNV  S                            +  GWEGSAADSR+LRDA+SRPN L VPKGYYYL DAGYPNAEGFLAPYRG+RYHL E
Subjt:  ALDGTYIKVNVVLS----------------------------IARGWEGSAADSRVLRDAISRPNGLTVPKGYYYLCDAGYPNAEGFLAPYRGERYHLSE

Query:  WR--------------------------------GRWAILRGKSYYPVRIQGGPSQHAAYFTIL---LIERWVTVKFLMSWMRWILLLLQLMNASSSRAP
        WR                                GRWAILRGKSY+PV +Q     H      L   LI R +T   +   +        +   SSSR P
Subjt:  WR--------------------------------GRWAILRGKSYYPVRIQGGPSQHAAYFTIL---LIERWVTVKFLMSWMRWILLLLQLMNASSSRAP

Query:  KHIWTKNEDAKLVESLVSLVHAGGWRSDNGTFKAGYLGQLENLMREKLPGQTFH
        KH WTK E+A LVE    LV+AGGWRSDNGTF+ GYL QL  +M  K+PG   H
Subjt:  KHIWTKNEDAKLVESLVSLVHAGGWRSDNGTFKAGYLGQLENLMREKLPGQTFH

A0A5A7SYW1 Retrotransposon protein2.2e-9151.99Show/hide
Query:  MDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVRTQFARSGESVSRHFNTVLHVVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLG
        MDRR FAILC LL+ VAGLSSTE+VDVEEMVAMFLHI AHDVKNRV++ +F RSGE+VSRHFN VL  VLRL++ L+K+P PVT++C D RWK F+NCLG
Subjt:  MDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVRTQFARSGESVSRHFNTVLHVVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLG

Query:  ALDGTYIKVNV----------------------------VLSIARGWEGSAADSRVLRDAISRPNGLTVPKGYYYLCDAGYPNAEGFLAPYRGERYHLSE
        ALDGTYIKVNV                             + +  GW+GSAADSR+LRDAISR NGL VPKGYYYLCDAGYPNAEGFLAPYRG+RYHL E
Subjt:  ALDGTYIKVNV----------------------------VLSIARGWEGSAADSRVLRDAISRPNGLTVPKGYYYLCDAGYPNAEGFLAPYRGERYHLSE

Query:  WR--------------------------------GRWAILRGKS--YYPVRIQGGPSQHAAYFTILLIERWVTVKFLMSWMRW-----ILLLLQLMNASS
        WR                                GRWAILRGKS   Y   ++      + Y T    E    ++    W +W       + +    ++S
Subjt:  WR--------------------------------GRWAILRGKS--YYPVRIQGGPSQHAAYFTILLIERWVTVKFLMSWMRW-----ILLLLQLMNASS

Query:  SRAPKHIWTKNEDAKLVESLVSLVHAGGWRSDNGTFKAGYLGQLENLMREKL
        +RAP+H+WT+ E+  LVE L+ LV  GGW+SDNGTF++GYL QL  +M EKL
Subjt:  SRAPKHIWTKNEDAKLVESLVSLVHAGGWRSDNGTFKAGYLGQLENLMREKL

A0A5D3BSN2 Putative nuclease HARBI11.8e-8555.27Show/hide
Query:  MDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVRTQFARSGESVSRHFNTVLHVVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLG
        MDRRCF ILC LL+TVAGL+S EVVDVEEMVAMFLHIVAHDVKNRV++ +F RSGE++SRHFN VL VV+RLHD LLKKP+PV   CTD RW+WF+NCLG
Subjt:  MDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVRTQFARSGESVSRHFNTVLHVVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLG

Query:  ALDGTYIKVNVVLS----------------------------IARGWEGSAADSRVLRDAISRPNGLTVPKGYYYLCDAGYPNAEGFLAPYRGERYHLSE
        ALDGTYIKVNV  S                            +  GWEGSAADSR+L DAISRPNGL VPKGYYYL DAGYPN +GFLA YRG+RYHL E
Subjt:  ALDGTYIKVNVVLS----------------------------IARGWEGSAADSRVLRDAISRPNGLTVPKGYYYLCDAGYPNAEGFLAPYRGERYHLSE

Query:  WRGRWAILRGKSYYPVRIQGGPSQHAAYFTILLIERWVTVKFLMSWMRWILLLLQLMNASSSRAPKHIWTKNEDAKLVESLVSLVHAGGWRSDNGTFKAG
        WRG              ++  PS    +F                           M  SS+R      TK E+A LVE LV LV+ GGWRSDNGTF  G
Subjt:  WRGRWAILRGKSYYPVRIQGGPSQHAAYFTILLIERWVTVKFLMSWMRWILLLLQLMNASSSRAPKHIWTKNEDAKLVESLVSLVHAGGWRSDNGTFKAG

Query:  YLGQLENLMREKL
        YL QL  +M  K+
Subjt:  YLGQLENLMREKL

A0A803QNC5 Uncharacterized protein2.3e-8548.88Show/hide
Query:  MDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVRTQFARSGESVSRHFNTVLHVVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLG
        MDRR F ILC  LKT  GL  ++ VDVEEMVA+FLHI+AHDVKNR+VR QFARSGE+VSRHFN VL+ +L LHD+LLKKP  +   C D RWKWF+NCLG
Subjt:  MDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVRTQFARSGESVSRHFNTVLHVVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLG

Query:  ALDGTYIKVNVVLS----------------------------IARGWEGSAADSRVLRDAISRPNGLTVPKGYYYLCDAGYPNAEGFLAPYRGERYHLSE
        ALDGTYIKVNV+ S                            +  GWEGSAADSRVLRDAI R NG  VP+GYYYLCDAGYPN EGFL PYRG+RYHL++
Subjt:  ALDGTYIKVNVVLS----------------------------IARGWEGSAADSRVLRDAISRPNGLTVPKGYYYLCDAGYPNAEGFLAPYRGERYHLSE

Query:  W-----------------------------RGRWAILRGKSYYPVRIQGGPSQHAAYFTILLIERWVTVKFLMSWMRWILLLLQLMNASSSRAP----KH
        W                             +GRWAILR +SYYPV+IQ                               ++L  +M A+S   P    KH
Subjt:  W-----------------------------RGRWAILRGKSYYPVRIQGGPSQHAAYFTILLIERWVTVKFLMSWMRWILLLLQLMNASSSRAP----KH

Query:  IWTKNEDAKLVESLVSLVHAGGWRSDNGTFKAGYLGQLENLMREKLPGQTFHTEQH
         WT  +D+KLVE LV + ++G W++DNGTFK GYL QLE +M +++P      + H
Subjt:  IWTKNEDAKLVESLVSLVHAGGWRSDNGTFKAGYLGQLENLMREKLPGQTFHTEQH

E5GCB5 Retrotransposon protein8.3e-9151.38Show/hide
Query:  TVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVRTQFARSGESVSRHFNTVLHVVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLGALDGTYIKVNVVLS
        T+AGL+STEVVDVEEMVAMFLHI+AHDVK+RV++ +F RSGE++SRHFN VL  V+RLH+ LLKKP+PV   CTD RW+WF+NCLGALDGTYIKVNV  S
Subjt:  TVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVRTQFARSGESVSRHFNTVLHVVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLGALDGTYIKVNVVLS

Query:  ----------------------------IARGWEGSAADSRVLRDAISRPNGLTVPKGYYYLCDAGYPNAEGFLAPYRGERYHLSEWR------------
                                    +  GWEGSAADSR+LRDA+SRPN L VPKGYYYL D GYPNAEGFLAPYRG+RYHL EWR            
Subjt:  ----------------------------IARGWEGSAADSRVLRDAISRPNGLTVPKGYYYLCDAGYPNAEGFLAPYRGERYHLSEWR------------

Query:  --------------------GRWAILRGKSYYPVRIQGGPSQHAAYFTILLIERWVT-------------------------VKFLMSWMRWILLLLQLM
                            GRWAILRGKSYYPV +Q   +  A      LI R +T                         ++    W +W   L + +
Subjt:  --------------------GRWAILRGKSYYPVRIQGGPSQHAAYFTILLIERWVT-------------------------VKFLMSWMRWILLLLQLM

Query:  NASSSRAPKHIWTKNEDAKLVESLVSLVHAGGWRSDNGTFKAGYLGQLENLMREKLPGQTFH
          SSSR PKH WTK E+A LVE LV LV+AGGWRSDNGTF+ GYL QL  +M  K+PG   H
Subjt:  NASSSRAPKHIWTKNEDAKLVESLVSLVHAGGWRSDNGTFKAGYLGQLENLMREKLPGQTFH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43722.1 unknown protein4.9e-1931.31Show/hide
Query:  MDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVRTQFARSGESVSRHFNTVLHVVLRLHDVLLKKPE-------PVTASCTDPRWK
        M   CF  LC +L+T   L  T  + +EE VAMFL I  H+   R V  +F R+ E+V R F  VL     L    ++ P        P         W 
Subjt:  MDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVRTQFARSGESVSRHFNTVLHVVLRLHDVLLKKPE-------PVTASCTDPRWK

Query:  WFQNCLGALDGTYIKVNV------------------VLSIA----------RGWEGSAADSRVLRDAISRPNGLTVPKG-YYYLCDAGYPNAEGFLAPYR
        +F   +GA+DGT++ V V                  +++I            G  GS  D+ VL+ A    +   +P    YYL D+GYPN +G LAPYR
Subjt:  WFQNCLGALDGTYIKVNV------------------VLSIA----------RGWEGSAADSRVLRDAISRPNGLTVPKG-YYYLCDAGYPNAEGFLAPYR

Query:  GE-----RYHLSEW
               RYH+S++
Subjt:  GE-----RYHLSEW

AT5G28730.1 unknown protein3.1e-1332.58Show/hide
Query:  MDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVRTQFARSGESVSRHFNTVLHVVLRL--HDVLLKKPEPVTASCT----DPR-WK
        M    F  LC +L    GL S+  + ++E VA+FL I A +   R +  +F  + E++ R F+ VL  + RL    +  +K E + A       D R W 
Subjt:  MDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVRTQFARSGESVSRHFNTVLHVVLRL--HDVLLKKPEPVTASCT----DPR-WK

Query:  WFQNCLGALDGTYIKV----NVVLSIARGWEGSAADSRVLRDAIS-RPNGLTVPKGYYYLCDAGYPNAEGFLAPYRGE
        +  + LG      + +     +      G  GS  D+RVL  AIS  P     P   YYL D+GY N  G+LAPYR E
Subjt:  WFQNCLGALDGTYIKV----NVVLSIARGWEGSAADSRVLRDAIS-RPNGLTVPKGYYYLCDAGYPNAEGFLAPYRGE

AT5G35695.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)5.5e-1045.45Show/hide
Query:  VVLSIARGWEGSAADSRVLRDAISRPNGLTVPKGYYYLCDAGYPNAEGFLAPYRGERYHLSEWRGR
        + + +  GWEGSA DSRVL DA+ +          +YL D G+ N   FLAP+RG RYHL E+ G+
Subjt:  VVLSIARGWEGSAADSRVLRDAISRPNGLTVPKGYYYLCDAGYPNAEGFLAPYRGERYHLSEWRGR

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)3.8e-2736.08Show/hide
Query:  MDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVRTQFARSGESVSRHFNTVLHVVLRL-HDVLLKKPEPVTASCTDPRWKWFQNCL
        MD+  F  LC LL+T   L  T  + +E  +A+FL I+ H+++ R V+  F  SGE++SRHFN VL+ V+ +  D         T    DP   +F++C+
Subjt:  MDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVRTQFARSGESVSRHFNTVLHVVLRL-HDVLLKKPEPVTASCTDPRWKWFQNCL

Query:  GALDGTYIKV-------------------NVVLS---------IARGWEGSAADSRVLRDAISRPNGLTVPKGYYYLCDAGYPNAEGFLAPYRG
        G +D  +I V                   NV+ +         +  GWEGSA+D +VL  A++R N L VP+G YY+ D  YPN  GF+APY G
Subjt:  GALDGTYIKV-------------------NVVLS---------IARGWEGSAADSRVLRDAISRPNGLTVPKGYYYLCDAGYPNAEGFLAPYRG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAGAAGATGTTTTGCCATACTTTGCACCTTATTAAAAACAGTTGCCGGTTTATCCAGTACGGAGGTCGTAGATGTAGAAGAGATGGTTGCCATGTTCTTGCACAT
TGTAGCCCACGATGTTAAGAACCGAGTAGTTCGTACGCAGTTCGCTAGGTCTGGTGAGTCAGTTTCTAGGCATTTCAACACCGTCCTTCATGTGGTGTTACGATTGCATG
ATGTTCTCTTAAAAAAACCTGAGCCAGTCACAGCCTCTTGTACGGATCCAAGGTGGAAATGGTTTCAGAATTGCCTCGGTGCGTTAGATGGAACATACATCAAGGTGAAT
GTTGTGTTGTCGATCGCCCGAGGGTGGGAAGGGTCTGCCGCTGATTCCCGGGTTCTTAGAGATGCAATATCAAGACCAAACGGACTCACAGTTCCGAAGGGCTATTATTA
TCTGTGCGATGCTGGGTACCCTAATGCAGAGGGTTTCCTGGCACCGTATAGAGGGGAACGTTACCACCTCTCTGAATGGCGTGGAAGGTGGGCTATCCTCCGAGGGAAAT
CGTACTATCCAGTTCGAATTCAAGGCGGACCATCGCAGCATGCTGCTTACTTCACAATCTTATTAATAGAGAGATGGGTGACCGTGAAATTCCTGATGAGCTGGATGAGG
TGGATTCTGCTTCTATTACAACTGATGAATGCCAGTTCGTCAAGAGCTCCAAAACACATTTGGACAAAGAACGAGGACGCGAAGCTGGTGGAGTCCCTCGTGTCCTTAGT
TCATGCAGGCGGTTGGAGGTCCGATAATGGGACATTCAAAGCTGGGTATTTGGGGCAGTTGGAGAATTTGATGAGGGAGAAACTGCCTGGACAGACGTTCCACACAGAGC
AGCATCGACTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACAGAAGATGTTTTGCCATACTTTGCACCTTATTAAAAACAGTTGCCGGTTTATCCAGTACGGAGGTCGTAGATGTAGAAGAGATGGTTGCCATGTTCTTGCACAT
TGTAGCCCACGATGTTAAGAACCGAGTAGTTCGTACGCAGTTCGCTAGGTCTGGTGAGTCAGTTTCTAGGCATTTCAACACCGTCCTTCATGTGGTGTTACGATTGCATG
ATGTTCTCTTAAAAAAACCTGAGCCAGTCACAGCCTCTTGTACGGATCCAAGGTGGAAATGGTTTCAGAATTGCCTCGGTGCGTTAGATGGAACATACATCAAGGTGAAT
GTTGTGTTGTCGATCGCCCGAGGGTGGGAAGGGTCTGCCGCTGATTCCCGGGTTCTTAGAGATGCAATATCAAGACCAAACGGACTCACAGTTCCGAAGGGCTATTATTA
TCTGTGCGATGCTGGGTACCCTAATGCAGAGGGTTTCCTGGCACCGTATAGAGGGGAACGTTACCACCTCTCTGAATGGCGTGGAAGGTGGGCTATCCTCCGAGGGAAAT
CGTACTATCCAGTTCGAATTCAAGGCGGACCATCGCAGCATGCTGCTTACTTCACAATCTTATTAATAGAGAGATGGGTGACCGTGAAATTCCTGATGAGCTGGATGAGG
TGGATTCTGCTTCTATTACAACTGATGAATGCCAGTTCGTCAAGAGCTCCAAAACACATTTGGACAAAGAACGAGGACGCGAAGCTGGTGGAGTCCCTCGTGTCCTTAGT
TCATGCAGGCGGTTGGAGGTCCGATAATGGGACATTCAAAGCTGGGTATTTGGGGCAGTTGGAGAATTTGATGAGGGAGAAACTGCCTGGACAGACGTTCCACACAGAGC
AGCATCGACTCTAG
Protein sequenceShow/hide protein sequence
MDRRCFAILCTLLKTVAGLSSTEVVDVEEMVAMFLHIVAHDVKNRVVRTQFARSGESVSRHFNTVLHVVLRLHDVLLKKPEPVTASCTDPRWKWFQNCLGALDGTYIKVN
VVLSIARGWEGSAADSRVLRDAISRPNGLTVPKGYYYLCDAGYPNAEGFLAPYRGERYHLSEWRGRWAILRGKSYYPVRIQGGPSQHAAYFTILLIERWVTVKFLMSWMR
WILLLLQLMNASSSRAPKHIWTKNEDAKLVESLVSLVHAGGWRSDNGTFKAGYLGQLENLMREKLPGQTFHTEQHRL