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Lag0031451 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031451
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr11:8691493..8692721
RNA-Seq ExpressionLag0031451
SyntenyLag0031451
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150845.1 uncharacterized protein LOC111018892 [Momordica charantia]3.0e-0439.76Show/hide
Query:  LAHVAKPCASRLKGVTPCHGRHPPSKLILMVVANDSS------STASTWLVDNGCNIHVPLDASNL---ALNSNYNGEEAIKL
        L H A  C +R+       GRHPP +L  MV   ++S      S+ +TWL D+ CN H+  D SNL   ++ S+YNGEE I +
Subjt:  LAHVAKPCASRLKGVTPCHGRHPPSKLILMVVANDSS------STASTWLVDNGCNIHVPLDASNL---ALNSNYNGEEAIKL

TrEMBL top hitse value%identityAlignment
A0A438KJ28 Retrovirus-related Pol polyprotein from transposon RE19.4e-0440.85Show/hide
Query:  HVAKPCASRLKGVTPCHGRHPPSKLILMVV-ANDSSSTASTWLVDNGCNIHVPLDASNLALNSNYNGEEAI
        H A  C +R+       GRHPP +L+ MVV AN +      W VD+G NIHV  D  NLA++  Y G + +
Subjt:  HVAKPCASRLKGVTPCHGRHPPSKLILMVV-ANDSSSTASTWLVDNGCNIHVPLDASNLALNSNYNGEEAI

A0A5D3BPY5 Putative mitochondrial protein5.5e-0441.38Show/hide
Query:  GRHPPSKLILMVVAN-----DSSSTASTWLVDNGCNIHVPLDASNLALNSNYNGEEAI
        G HPPS+L  MVV +        +T + W  D+GCN+H+  + +NL L++NYNG+E +
Subjt:  GRHPPSKLILMVVAN-----DSSSTASTWLVDNGCNIHVPLDASNLALNSNYNGEEAI

A0A6J1D9L6 uncharacterized protein LOC1110188921.5e-0439.76Show/hide
Query:  LAHVAKPCASRLKGVTPCHGRHPPSKLILMVVANDSS------STASTWLVDNGCNIHVPLDASNL---ALNSNYNGEEAIKL
        L H A  C +R+       GRHPP +L  MV   ++S      S+ +TWL D+ CN H+  D SNL   ++ S+YNGEE I +
Subjt:  LAHVAKPCASRLKGVTPCHGRHPPSKLILMVVANDSS------STASTWLVDNGCNIHVPLDASNL---ALNSNYNGEEAIKL

A5BNV2 Uncharacterized protein9.4e-0440.85Show/hide
Query:  HVAKPCASRLKGVTPCHGRHPPSKLILMVV-ANDSSSTASTWLVDNGCNIHVPLDASNLALNSNYNGEEAI
        H A  C +R+       GRHPP +L+ MVV AN +      W VD+G NIHV  D  NLA++  Y G + +
Subjt:  HVAKPCASRLKGVTPCHGRHPPSKLILMVV-ANDSSSTASTWLVDNGCNIHVPLDASNLALNSNYNGEEAI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACGCAGGTGCACCCACTGGGCGTCTCCTGCCCCTGCGTGCATGCGTGCGCACGCATGGGCTGCTGCCTGCGTGCAGCAGCGCTCATGCTGCTTGTACGTGCTGGC
CCTGCTACCAGCATGCATGGGCATGCTAGTGCATGTCTTCGGTGTGCCTTCTTTGCACCTGATTGTTGTCCCACGTGCCCACATCACTTCGCATGTCTTCCGCCACACTT
ATATTACTCAGTGGCTCATTGGCCTTCTGTCAGCCTCCGTGCGCATCTCATGGCCTTGTCATGGCCTCCTGCCACGCTATGTCATCTCACCATGTGTTCTGTCTGTCCCG
CATTCCTCCAACACCGTGAGAACATGTTTGTGGCTAATCTCTCTCAGCCACGAGGGTGCCACCTACGCACTCATCTTGGCCCACGTGGCCAAGCCGTGTGCTTCGAGACT
TAAGGGTGTAACACCTTGCCATGGAAGACATCCTCCATCCAAACTTATTTTAATGGTTGTTGCTAATGATTCTTCTTCCACTGCTTCTACCTGGCTTGTTGATAATGGAT
GCAATATTCATGTCCCTTTAGATGCTTCTAATTTGGCATTGAATTCCAATTACAATGGAGAAGAGGCTATTAAGTTGCAAATTTTCAAGCTCTTCCTGTTGTTCAGGACA
AGGTCTCGAAATAAGTTTCTATATAAGGGCAAATATAAGGATGGTTTATATGCTATTTCGGTTGTTGTTAATACTTTGAACTCGACTTCTAGTTTGTCTAATATTTCTAA
TTTACACTATGTTCCTGTTTGTGCCTCTACTACTGTGTCTCATGCTTCTTTGACTAATTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCACGCAGGTGCACCCACTGGGCGTCTCCTGCCCCTGCGTGCATGCGTGCGCACGCATGGGCTGCTGCCTGCGTGCAGCAGCGCTCATGCTGCTTGTACGTGCTGGC
CCTGCTACCAGCATGCATGGGCATGCTAGTGCATGTCTTCGGTGTGCCTTCTTTGCACCTGATTGTTGTCCCACGTGCCCACATCACTTCGCATGTCTTCCGCCACACTT
ATATTACTCAGTGGCTCATTGGCCTTCTGTCAGCCTCCGTGCGCATCTCATGGCCTTGTCATGGCCTCCTGCCACGCTATGTCATCTCACCATGTGTTCTGTCTGTCCCG
CATTCCTCCAACACCGTGAGAACATGTTTGTGGCTAATCTCTCTCAGCCACGAGGGTGCCACCTACGCACTCATCTTGGCCCACGTGGCCAAGCCGTGTGCTTCGAGACT
TAAGGGTGTAACACCTTGCCATGGAAGACATCCTCCATCCAAACTTATTTTAATGGTTGTTGCTAATGATTCTTCTTCCACTGCTTCTACCTGGCTTGTTGATAATGGAT
GCAATATTCATGTCCCTTTAGATGCTTCTAATTTGGCATTGAATTCCAATTACAATGGAGAAGAGGCTATTAAGTTGCAAATTTTCAAGCTCTTCCTGTTGTTCAGGACA
AGGTCTCGAAATAAGTTTCTATATAAGGGCAAATATAAGGATGGTTTATATGCTATTTCGGTTGTTGTTAATACTTTGAACTCGACTTCTAGTTTGTCTAATATTTCTAA
TTTACACTATGTTCCTGTTTGTGCCTCTACTACTGTGTCTCATGCTTCTTTGACTAATTTGTGA
Protein sequenceShow/hide protein sequence
MARRCTHWASPAPACMRAHAWAAACVQQRSCCLYVLALLPACMGMLVHVFGVPSLHLIVVPRAHITSHVFRHTYITQWLIGLLSASVRISWPCHGLLPRYVISPCVLSVP
HSSNTVRTCLWLISLSHEGATYALILAHVAKPCASRLKGVTPCHGRHPPSKLILMVVANDSSSTASTWLVDNGCNIHVPLDASNLALNSNYNGEEAIKLQIFKLFLLFRT
RSRNKFLYKGKYKDGLYAISVVVNTLNSTSSLSNISNLHYVPVCASTTVSHASLTNL