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Lag0031469 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031469
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr11:8864645..8865362
RNA-Seq ExpressionLag0031469
SyntenyLag0031469
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR036875 - Zinc finger, CCHC-type superfamily
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG51369.1 hypothetical protein EZV62_023893 [Acer yangbiense]1.0e-1631.92Show/hide
Query:  ITAAEKDKVV-AIDDEDLDEASDDLRDTILCKVLTPKLINPEIWDKERIRKGWPWNYDKALLAIEDLKGDSRISQAKF------------------RKWA
        ++ AE+D+ +  I +ED  +  +D+   ++ KVLT         D+ R+    PW++  +L+A+E   G   ISQ  F                  R+ A
Subjt:  ITAAEKDKVV-AIDDEDLDEASDDLRDTILCKVLTPKLINPEIWDKERIRKGWPWNYDKALLAIEDLKGDSRISQAKF------------------RKWA

Query:  TALGDSLGSFQEVDLEEEENNGDNTLRILVKVDITQPRKRGLMVKIGSKATETWVRVTYERLSEFCYDCGKIGHVKSECEEPQPKE---EELI--YGEGL
          + + +G   E+  E  E  G   +R+ V++DI++P KR L +K+G     T V + YERL EFC+ CG+IGH   EC++ + KE   EE +  YG  L
Subjt:  TALGDSLGSFQEVDLEEEENNGDNTLRILVKVDITQPRKRGLMVKIGSKATETWVRVTYERLSEFCYDCGKIGHVKSECEEPQPKE---EELI--YGEGL

Query:  RA-----TPILGG
        +A     T I GG
Subjt:  RA-----TPILGG

XP_021749726.1 uncharacterized protein LOC110715454 [Chenopodium quinoa]1.4e-1631.15Show/hide
Query:  LRDTILCKVLTPKLINPEIW---DKERIRKGWPWNYDKALLAIEDLKGDSRISQAKF------------------RKWATALGDSLGSFQEVDLEEEENN
        L D +  K+L P L   + +   D+E +  G PW +D  L+ I ++ G+ + S+  F                  +K    +GD LG+F E+D  +    
Subjt:  LRDTILCKVLTPKLINPEIW---DKERIRKGWPWNYDKALLAIEDLKGDSRISQAKF------------------RKWATALGDSLGSFQEVDLEEEENN

Query:  GDNTLRILVKVDITQPRKRGLMVKIGSKATETWVRVTYERLSEFCYDCGKIGHVKSEC---EEPQPKEEELI--YGEGLRATP
        G+  +R+ V +D+ +P +RGL + +G+ A+  WV + YERL EFC+ CG++ H  S C   +E      E++  YG  LRA+P
Subjt:  GDNTLRILVKVDITQPRKRGLMVKIGSKATETWVRVTYERLSEFCYDCGKIGHVKSEC---EEPQPKEEELI--YGEGLRATP

XP_039815364.1 uncharacterized protein LOC120678302 [Panicum virgatum]1.8e-1632.47Show/hide
Query:  KERIRKGWPWNYDKALLAIEDLKGDSRISQAKF------------------RKWATALGDSLGSFQEVDLEEEENNGDNTLRILVKVDITQPRKRGLMVK
        K R     PW   K  L + D      I + +F                  ++ A  +G+ LG F EVDLE +E      LR+ V+++I +P +RG+M+ 
Subjt:  KERIRKGWPWNYDKALLAIEDLKGDSRISQAKF------------------RKWATALGDSLGSFQEVDLEEEENNGDNTLRILVKVDITQPRKRGLMVK

Query:  IGSKATETWVRVTYERLSEFCYDCGKIGHVKSECEEPQPKEEELIYGEGLRATP
        +G  A E W  +TYE L +FCY CG+IGH    C       E+  +G  LR  P
Subjt:  IGSKATETWVRVTYERLSEFCYDCGKIGHVKSECEEPQPKEEELIYGEGLRATP

XP_039827601.1 uncharacterized protein LOC120689378 [Panicum virgatum]1.8e-1632.47Show/hide
Query:  KERIRKGWPWNYDKALLAIEDLKGDSRISQAKF------------------RKWATALGDSLGSFQEVDLEEEENNGDNTLRILVKVDITQPRKRGLMVK
        K R     PW   K  L + D      I + +F                  ++ A  +G+ LG F EVDLE +       LR+ V+++I +P +RG+M+ 
Subjt:  KERIRKGWPWNYDKALLAIEDLKGDSRISQAKF------------------RKWATALGDSLGSFQEVDLEEEENNGDNTLRILVKVDITQPRKRGLMVK

Query:  IGSKATETWVRVTYERLSEFCYDCGKIGHVKSECEEPQPKEEELIYGEGLRATP
        +G  A E W  +TYE L +FCY CG+IGH    C      EE+  +G  LR  P
Subjt:  IGSKATETWVRVTYERLSEFCYDCGKIGHVKSECEEPQPKEEELIYGEGLRATP

XP_042950312.1 uncharacterized protein LOC122282425 [Carya illinoinensis]1.8e-1630.34Show/hide
Query:  GELKITAAEKDKVVAIDDEDLDEASDDLRDTILCKVLTPKLINPE--------IW------------------------DKERIRKGWPWNYDKALLAIE
        G++ +   EK+ VVA+DDE + E     +  ++ ++LT K  N E        IW                        D+ERI +  PW++DK L+ ++
Subjt:  GELKITAAEKDKVVAIDDEDLDEASDDLRDTILCKVLTPKLINPE--------IW------------------------DKERIRKGWPWNYDKALLAIE

Query:  DLKGDSRISQAKFRK---WAT---------------ALGDSLGSFQEVDLEEEENNGDNTLRILVKVDITQPRKRGLMVKIGSKATETWVRVTYERLSEF
           G  +  Q    K   W                  +G SLG   EVDL + E      +R+ + +D+++P  RG  V +G   T  WVR +YERL EF
Subjt:  DLKGDSRISQAKFRK---WAT---------------ALGDSLGSFQEVDLEEEENNGDNTLRILVKVDITQPRKRGLMVKIGSKATETWVRVTYERLSEF

Query:  CYDCGKIGHVKSECEEPQPKE---EELIYGEGLR
        CY CG+IGHV+ +CE+   ++     L YG+ LR
Subjt:  CYDCGKIGHVKSECEEPQPKE---EELIYGEGLR

TrEMBL top hitse value%identityAlignment
A0A2N9GD63 Reverse transcriptase domain-containing protein8.6e-1733.54Show/hide
Query:  EIWDKERIRKGWPWNYDKALLAIEDLKGDSRISQAKF------------------RKWATALGDSLGSFQEVDLEEEENNGDNTLRILVKVDITQPRKRG
        ++ D ER+R+G PW+YDK L++ + +  D+ +++ +                   R++A ALG ++G  ++V   E+E   +  +RI VKVDI++P  RG
Subjt:  EIWDKERIRKGWPWNYDKALLAIEDLKGDSRISQAKF------------------RKWATALGDSLGSFQEVDLEEEENNGDNTLRILVKVDITQPRKRG

Query:  LMVKIGSKATETWVRVTYERLSEFCYDCGKIGHVKSECE-----EPQPKEEELIYGEGLRA
           ++ S   ETW+   YERL  FCY CG + H + +CE     + + + EE  YG  LRA
Subjt:  LMVKIGSKATETWVRVTYERLSEFCYDCGKIGHVKSECE-----EPQPKEEELIYGEGLRA

A0A5C7H3R2 CCHC-type domain-containing protein5.1e-1731.92Show/hide
Query:  ITAAEKDKVV-AIDDEDLDEASDDLRDTILCKVLTPKLINPEIWDKERIRKGWPWNYDKALLAIEDLKGDSRISQAKF------------------RKWA
        ++ AE+D+ +  I +ED  +  +D+   ++ KVLT         D+ R+    PW++  +L+A+E   G   ISQ  F                  R+ A
Subjt:  ITAAEKDKVV-AIDDEDLDEASDDLRDTILCKVLTPKLINPEIWDKERIRKGWPWNYDKALLAIEDLKGDSRISQAKF------------------RKWA

Query:  TALGDSLGSFQEVDLEEEENNGDNTLRILVKVDITQPRKRGLMVKIGSKATETWVRVTYERLSEFCYDCGKIGHVKSECEEPQPKE---EELI--YGEGL
          + + +G   E+  E  E  G   +R+ V++DI++P KR L +K+G     T V + YERL EFC+ CG+IGH   EC++ + KE   EE +  YG  L
Subjt:  TALGDSLGSFQEVDLEEEENNGDNTLRILVKVDITQPRKRGLMVKIGSKATETWVRVTYERLSEFCYDCGKIGHVKSECEEPQPKE---EELI--YGEGL

Query:  RA-----TPILGG
        +A     T I GG
Subjt:  RA-----TPILGG

A0A803LAB8 Uncharacterized protein4.3e-1633.75Show/hide
Query:  DKERIRKGWPWNYDKALLAIEDLKGDSRISQAKF------------------RKWATALGDSLGSFQEVDLEEEENNGDNTLRILVKVDITQPRKRGLMV
        DKE++  G PW +D  LL ++++KG+ + S+ +F                  +K  T +GD LG F E D  +    G+  LRI V +DI +P +RGL +
Subjt:  DKERIRKGWPWNYDKALLAIEDLKGDSRISQAKF------------------RKWATALGDSLGSFQEVDLEEEENNGDNTLRILVKVDITQPRKRGLMV

Query:  KIGSKATETWVRVTYERLSEFCYDCGKIGHVKSEC---EEPQPKEEELI--YGEGLRATP
          G  +++ WV + YERL EFC+ CG++ H +  C   +E +    +++  YG  LRA+P
Subjt:  KIGSKATETWVRVTYERLSEFCYDCGKIGHVKSEC---EEPQPKEEELI--YGEGLRATP

A0A803LK12 Uncharacterized protein4.3e-1631.32Show/hide
Query:  LRDTILCKVLTPKLINPEIW---DKERIRKGWPWNYDKALLAIEDLKGDSRISQAKFRK------------------WATALGDSLGSFQEVDLEEEENN
        L D +  +V+   L   + +   DK R+  G PW +DK +L ++ ++GD + S+  F                    +A  +GD++G F E D EE+   
Subjt:  LRDTILCKVLTPKLINPEIW---DKERIRKGWPWNYDKALLAIEDLKGDSRISQAKFRK------------------WATALGDSLGSFQEVDLEEEENN

Query:  GDNTLRILVKVDITQPRKRGLMVKIGSKATETWVRVTYERLSEFCYDCGKIGHVKSECEEPQPKEEE----LIYGEGLRATP
         +  +RI V +DIT+P +RG+ V  G   ++ WV   YERL +F Y CG++GH+  +C E +  +EE      YG  + A+P
Subjt:  GDNTLRILVKVDITQPRKRGLMVKIGSKATETWVRVTYERLSEFCYDCGKIGHVKSECEEPQPKEEE----LIYGEGLRATP

A0A803MN93 Uncharacterized protein1.9e-1631.43Show/hide
Query:  LKITAAEKDKV-VAIDDEDLDEASDDLRDTILCKVLTPKLINPE-----IWDKERIRKGWPWNYDKALLAIEDLKGDSRISQAKFRK-------------
        LK+T  E   +  A  DE + ++   L  +++  +LT K  N E     + DK+R   G  W +DK +L ++ + GD + S+    K             
Subjt:  LKITAAEKDKV-VAIDDEDLDEASDDLRDTILCKVLTPKLINPE-----IWDKERIRKGWPWNYDKALLAIEDLKGDSRISQAKFRK-------------

Query:  -----WATALGDSLGSFQEVDLEEEENNGDNTLRILVKVDITQPRKRGLMVKIGSKATETWVRVTYERLSEFCYDCGKIGHVKSECEEPQPKEEE----L
             +A  +G+++G F E D EE+    D  +RI V VDIT+P +RG+ V     +   WV   YERL +FCY CG++ H+  +C E +  EEE     
Subjt:  -----WATALGDSLGSFQEVDLEEEENNGDNTLRILVKVDITQPRKRGLMVKIGSKATETWVRVTYERLSEFCYDCGKIGHVKSECEEPQPKEEE----L

Query:  IYGEGLRATP
         YG  + A+P
Subjt:  IYGEGLRATP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGAACTGAAAATCACAGCAGCGGAGAAGGATAAGGTGGTAGCCATAGACGACGAGGATCTTGACGAAGCATCAGACGATCTCAGAGACACAATACTCTGCAAAGT
TCTCACACCAAAACTCATAAACCCAGAAATTTGGGACAAGGAAAGAATACGGAAAGGATGGCCATGGAATTACGACAAAGCCTTGCTAGCTATCGAAGATCTAAAAGGAG
ATAGTCGAATCTCACAAGCGAAATTCAGGAAATGGGCCACTGCTCTAGGGGACTCGTTAGGAAGCTTTCAGGAGGTAGACTTAGAAGAGGAAGAGAACAATGGGGACAAC
ACTTTGCGGATTCTTGTAAAAGTTGATATCACCCAACCTCGTAAGAGGGGTCTCATGGTGAAAATAGGATCGAAAGCAACAGAAACTTGGGTGAGGGTGACCTATGAGAG
GTTGTCGGAATTCTGCTACGATTGCGGAAAGATAGGACATGTGAAATCAGAATGTGAAGAACCTCAGCCAAAAGAGGAAGAACTGATTTACGGTGAAGGGTTGAGAGCTA
CACCCATCTTGGGAGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGGAACTGAAAATCACAGCAGCGGAGAAGGATAAGGTGGTAGCCATAGACGACGAGGATCTTGACGAAGCATCAGACGATCTCAGAGACACAATACTCTGCAAAGT
TCTCACACCAAAACTCATAAACCCAGAAATTTGGGACAAGGAAAGAATACGGAAAGGATGGCCATGGAATTACGACAAAGCCTTGCTAGCTATCGAAGATCTAAAAGGAG
ATAGTCGAATCTCACAAGCGAAATTCAGGAAATGGGCCACTGCTCTAGGGGACTCGTTAGGAAGCTTTCAGGAGGTAGACTTAGAAGAGGAAGAGAACAATGGGGACAAC
ACTTTGCGGATTCTTGTAAAAGTTGATATCACCCAACCTCGTAAGAGGGGTCTCATGGTGAAAATAGGATCGAAAGCAACAGAAACTTGGGTGAGGGTGACCTATGAGAG
GTTGTCGGAATTCTGCTACGATTGCGGAAAGATAGGACATGTGAAATCAGAATGTGAAGAACCTCAGCCAAAAGAGGAAGAACTGATTTACGGTGAAGGGTTGAGAGCTA
CACCCATCTTGGGAGGTTAG
Protein sequenceShow/hide protein sequence
MGELKITAAEKDKVVAIDDEDLDEASDDLRDTILCKVLTPKLINPEIWDKERIRKGWPWNYDKALLAIEDLKGDSRISQAKFRKWATALGDSLGSFQEVDLEEEENNGDN
TLRILVKVDITQPRKRGLMVKIGSKATETWVRVTYERLSEFCYDCGKIGHVKSECEEPQPKEEELIYGEGLRATPILGG