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Lag0031471 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031471
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr11:8866217..8866564
RNA-Seq ExpressionLag0031471
SyntenyLag0031471
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0004518 - nuclease activity (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG57064.1 hypothetical protein EZV62_018377 [Acer yangbiense]8.0e-2049.54Show/hide
Query:  MGNPRAIHNLKNEIRKNSPSIVFISESKCKACKAELVKNEIGFDFCFGVDSRGFSGGLALYWNKECDLSINSFSKGHIDTTI-RDKDFNWRFTGFYGDLD
        MGN R I  LK  I+K SP +VF+SE+K K   A+  K  +GF+  F VD  G SGGL L WN +C +S+ S SKGHID  + RD +  WRF+GFYG L+
Subjt:  MGNPRAIHNLKNEIRKNSPSIVFISESKCKACKAELVKNEIGFDFCFGVDSRGFSGGLALYWNKECDLSINSFSKGHIDTTI-RDKDFNWRFTGFYGDLD

Query:  PNKRDDSWQ
           + DSW+
Subjt:  PNKRDDSWQ

TXG63812.1 hypothetical protein EZV62_010806 [Acer yangbiense]4.3e-2144.74Show/hide
Query:  MGNPRAIHNLKNEIRKNSPSIVFISESKCKACKAELVKNEIGFDFCFGVDSRGFSGGLALYWNKECDLSINSFSKGHIDTTIRDKDFN-WRFTGFYGDLD
        +GNP  +  LK  ++K+SP ++F+SE+K +  +AE ++  +G+   FGVDS G SGGL L WN++C++S+ SFS GHID  I+ +D   W+F+G YG+ +
Subjt:  MGNPRAIHNLKNEIRKNSPSIVFISESKCKACKAELVKNEIGFDFCFGVDSRGFSGGLALYWNKECDLSINSFSKGHIDTTIRDKDFN-WRFTGFYGDLD

Query:  PNKRDDSWQFWNVL
        PNKR +   FWN++
Subjt:  PNKRDDSWQFWNVL

TXG68544.1 hypothetical protein EZV62_003479 [Acer yangbiense]9.5e-2150.93Show/hide
Query:  MGNPRAIHNLKNEIRKNSPSIVFISESKCKACKAELVKNEIGFDFCFGVDSRGFSGGLALYWNKECDLSINSFSKGHIDTTIRDKD-FNWRFTGFYGDLD
        +GNPRA   L+  ++K+SP +VF+S++K    KA+ VK  +GF+ CF VDS G SGGL L W     +S+ SFS GHID  I   D F W F+GFYGD +
Subjt:  MGNPRAIHNLKNEIRKNSPSIVFISESKCKACKAELVKNEIGFDFCFGVDSRGFSGGLALYWNKECDLSINSFSKGHIDTTIRDKD-FNWRFTGFYGDLD

Query:  PNKRDDSW
        PNKR  SW
Subjt:  PNKRDDSW

XP_030974624.1 uncharacterized protein LOC115994558 [Quercus lobata]4.0e-1944.55Show/hide
Query:  MGNPRAIHNLKNEIRKNSPSIVFISESKCKACKAELVKNEIGFDFCFGVDSRGFSGGLALYWNKECDLSINSFSKGHIDTTIRDKDFN--WRFTGFYGDL
        +GNPR++  L + + +  P IVF+ E+K K  + E +KN +GF   F V S+G SGG+AL+W ++ +L I SFS  HID  +R+ D N  WR TGFYG  
Subjt:  MGNPRAIHNLKNEIRKNSPSIVFISESKCKACKAELVKNEIGFDFCFGVDSRGFSGGLALYWNKECDLSINSFSKGHIDTTIRDKDFN--WRFTGFYGDL

Query:  DPNKRDDSWQ
        + ++R DSW+
Subjt:  DPNKRDDSWQ

XP_040251443.1 uncharacterized protein LOC120968610 [Aegilops tauschii subsp. strangulata]9.5e-2139.82Show/hide
Query:  MGNPRAIHNLKNEIRKNSPSIVFISESKCKACKAELVKNEIGFDFCFGVDSRGFSGGLALYWNKECDLSINSFSKGHIDTTIRDKDFNWRFTGFYGDLDP
        +GNP  +  L+  +++  P+++FI E+K +  + E +K  +GF  CF V+S G SGG+ L+W+K+ D+S+ +FSK HID  +   + +WRFTGFYG+   
Subjt:  MGNPRAIHNLKNEIRKNSPSIVFISESKCKACKAELVKNEIGFDFCFGVDSRGFSGGLALYWNKECDLSINSFSKGHIDTTIRDKDFNWRFTGFYGDLDP

Query:  NKRDDSWQFWNVL
          R  SW+F + L
Subjt:  NKRDDSWQFWNVL

TrEMBL top hitse value%identityAlignment
A0A5C7I5K8 DUF4283 domain-containing protein2.1e-2144.74Show/hide
Query:  MGNPRAIHNLKNEIRKNSPSIVFISESKCKACKAELVKNEIGFDFCFGVDSRGFSGGLALYWNKECDLSINSFSKGHIDTTIRDKDFN-WRFTGFYGDLD
        +GNP  +  LK  ++K+SP ++F+SE+K +  +AE ++  +G+   FGVDS G SGGL L WN++C++S+ SFS GHID  I+ +D   W+F+G YG+ +
Subjt:  MGNPRAIHNLKNEIRKNSPSIVFISESKCKACKAELVKNEIGFDFCFGVDSRGFSGGLALYWNKECDLSINSFSKGHIDTTIRDKDFN-WRFTGFYGDLD

Query:  PNKRDDSWQFWNVL
        PNKR +   FWN++
Subjt:  PNKRDDSWQFWNVL

A0A5C7IHU5 Uncharacterized protein4.6e-2150.93Show/hide
Query:  MGNPRAIHNLKNEIRKNSPSIVFISESKCKACKAELVKNEIGFDFCFGVDSRGFSGGLALYWNKECDLSINSFSKGHIDTTIRDKD-FNWRFTGFYGDLD
        +GNPRA   L+  ++K+SP +VF+S++K    KA+ VK  +GF+ CF VDS G SGGL L W     +S+ SFS GHID  I   D F W F+GFYGD +
Subjt:  MGNPRAIHNLKNEIRKNSPSIVFISESKCKACKAELVKNEIGFDFCFGVDSRGFSGGLALYWNKECDLSINSFSKGHIDTTIRDKD-FNWRFTGFYGDLD

Query:  PNKRDDSW
        PNKR  SW
Subjt:  PNKRDDSW

A0A803PPS5 Uncharacterized protein3.5e-2148.21Show/hide
Query:  MGNPRAIHNLKNEIRKNSPSIVFISESKCKACKAELVKNEIGFDFCFGVDSRGFSGGLALYWNKECDLSINSFSKGHIDTTIRDK-DFNWRFTGFYGDLD
        MGNP  + +LK+ + + +P +VFISES+ +  KAE ++  +GF  CF V++ G SG L L W+ E   +I SFS  HID+ I+++ D  WRFTGFYGD D
Subjt:  MGNPRAIHNLKNEIRKNSPSIVFISESKCKACKAELVKNEIGFDFCFGVDSRGFSGGLALYWNKECDLSINSFSKGHIDTTIRDK-DFNWRFTGFYGDLD

Query:  PNKRDDSWQFWN
        PN+R DSW+  N
Subjt:  PNKRDDSWQFWN

A0A803Q6L7 Uncharacterized protein1.7e-2047.71Show/hide
Query:  MGNPRAIHNLKNEIRKNSPSIVFISESKCKACKAELVKNEIGFDFCFGVDSRGFSGGLALYWNKECDLSINSFSKGHIDTTIR-DKDFNWRFTGFYGDLD
        MGNP  I  LK+ +++ +P ++F SE++ K  KAE ++  + F+ CF V++RG S GL L W+   D +I SFS  HID+ IR ++D  WRFTGFYGD D
Subjt:  MGNPRAIHNLKNEIRKNSPSIVFISESKCKACKAELVKNEIGFDFCFGVDSRGFSGGLALYWNKECDLSINSFSKGHIDTTIR-DKDFNWRFTGFYGDLD

Query:  PNKRDDSWQ
        PN+R +SW+
Subjt:  PNKRDDSWQ

A0A803Q9W0 Uncharacterized protein1.7e-2044.35Show/hide
Query:  MGNPRAIHNLKNEIRKNSPSIVFISESKCKACKAELVKNEIGFDFCFGVDSRGFSGGLALYWNKECDLSINSFSKGHIDTTI-RDKDFNWRFTGFYGDLD
        +GNP     L N ++ + P IVF+SE++ K+   E ++  +GF+ CF VD++G SGGLAL W +   + +NSF+  HID  I +++D  WRFTGFYGD D
Subjt:  MGNPRAIHNLKNEIRKNSPSIVFISESKCKACKAELVKNEIGFDFCFGVDSRGFSGGLALYWNKECDLSINSFSKGHIDTTI-RDKDFNWRFTGFYGDLD

Query:  PNKRDDSWQFWNVLA
        P++R  SWQ    +A
Subjt:  PNKRDDSWQFWNVLA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAACCCCCGAGCGATCCACAACCTTAAGAATGAAATTAGGAAGAACTCCCCAAGCATAGTTTTTATATCCGAATCGAAGTGTAAAGCGTGTAAGGCAGAGTTGGT
TAAGAACGAAATTGGTTTTGATTTCTGTTTTGGTGTTGACAGCAGGGGTTTTAGTGGTGGGCTGGCACTTTATTGGAATAAGGAGTGTGATCTTTCTATCAACTCCTTTT
CCAAGGGCCACATCGACACTACCATTAGAGACAAGGATTTCAACTGGCGTTTTACTGGTTTCTACGGAGATCTGGACCCTAACAAAAGAGACGACTCTTGGCAATTTTGG
AACGTCTTAGCGATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAACCCCCGAGCGATCCACAACCTTAAGAATGAAATTAGGAAGAACTCCCCAAGCATAGTTTTTATATCCGAATCGAAGTGTAAAGCGTGTAAGGCAGAGTTGGT
TAAGAACGAAATTGGTTTTGATTTCTGTTTTGGTGTTGACAGCAGGGGTTTTAGTGGTGGGCTGGCACTTTATTGGAATAAGGAGTGTGATCTTTCTATCAACTCCTTTT
CCAAGGGCCACATCGACACTACCATTAGAGACAAGGATTTCAACTGGCGTTTTACTGGTTTCTACGGAGATCTGGACCCTAACAAAAGAGACGACTCTTGGCAATTTTGG
AACGTCTTAGCGATGTGA
Protein sequenceShow/hide protein sequence
MGNPRAIHNLKNEIRKNSPSIVFISESKCKACKAELVKNEIGFDFCFGVDSRGFSGGLALYWNKECDLSINSFSKGHIDTTIRDKDFNWRFTGFYGDLDPNKRDDSWQFW
NVLAM