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Lag0031488 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031488
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDynein light chain
Genome locationchr11:9140963..9141348
RNA-Seq ExpressionLag0031488
SyntenyLag0031488
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013650.1 Dynein light chain 1, cytoplasmic [Cucurbita argyrosperma subsp. argyrosperma]1.5e-3793.41Show/hide
Query:  MSNDAKRSIQGNLMVKSVSEDRKPPA---AGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFG
        MSNDAKRSIQGNLMVKSVSEDRKP A    GKKIVIKSADMFGDVQKEA+DVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFG
Subjt:  MSNDAKRSIQGNLMVKSVSEDRKPPA---AGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFG

XP_008458417.1 PREDICTED: dynein light chain 1, cytoplasmic [Cucumis melo]1.1e-3791.3Show/hide
Query:  MSNDAKRSIQGNLMVKSVSEDRKPP---AAGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN
        MSNDAKRSIQGNLMVKSVSEDRKPP   A GKKIVIKSADMFGDVQKEA+DVAIAAFEKHSVEKD+AE IKKEFDKRHGPTWHCIVGRNFG+
Subjt:  MSNDAKRSIQGNLMVKSVSEDRKPP---AAGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN

XP_022959519.1 dynein light chain 1, cytoplasmic-like [Cucurbita moschata]1.1e-3792.39Show/hide
Query:  MSNDAKRSIQGNLMVKSVSEDRKPPA---AGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN
        MSNDAKRSIQGNLMVKSVSEDRKP A    GKKIVIKSADMFGDVQKEA+DVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFG+
Subjt:  MSNDAKRSIQGNLMVKSVSEDRKPPA---AGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN

XP_023006429.1 dynein light chain 1, cytoplasmic [Cucurbita maxima]1.9e-3791.3Show/hide
Query:  MSNDAKRSIQGNLMVKSVSEDRKP---PAAGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN
        MSNDAKRSIQGNLMVKSVSEDRKP      GKKIVIKSADMFGDVQKEA+DVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFG+
Subjt:  MSNDAKRSIQGNLMVKSVSEDRKP---PAAGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN

XP_038906782.1 dynein light chain 1, cytoplasmic-like [Benincasa hispida]3.3e-3790.22Show/hide
Query:  MSNDAKRSIQGNLMVKSVSEDRKPPA---AGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN
        MSNDAKRSIQGNLMVKSVSEDRKPPA    GKKIVIKSADMFGDVQKEA++VAIAAFEKHSVEKD+AE IKKEFDKRHGPTWHCIVGRNFG+
Subjt:  MSNDAKRSIQGNLMVKSVSEDRKPPA---AGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN

TrEMBL top hitse value%identityAlignment
A0A1S3C7T8 Dynein light chain5.5e-3891.3Show/hide
Query:  MSNDAKRSIQGNLMVKSVSEDRKPP---AAGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN
        MSNDAKRSIQGNLMVKSVSEDRKPP   A GKKIVIKSADMFGDVQKEA+DVAIAAFEKHSVEKD+AE IKKEFDKRHGPTWHCIVGRNFG+
Subjt:  MSNDAKRSIQGNLMVKSVSEDRKPP---AAGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN

A0A6J1EQC6 Dynein light chain1.0e-3690.22Show/hide
Query:  MSNDAKRSIQGNLMVKSVSEDRKPPA---AGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN
        MSNDAKRSIQGN MVK+VSEDRKP A    GKKIVIKSADMFGDVQKEAVDVAI AFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFG+
Subjt:  MSNDAKRSIQGNLMVKSVSEDRKPPA---AGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN

A0A6J1H8A5 Dynein light chain5.5e-3892.39Show/hide
Query:  MSNDAKRSIQGNLMVKSVSEDRKPPA---AGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN
        MSNDAKRSIQGNLMVKSVSEDRKP A    GKKIVIKSADMFGDVQKEA+DVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFG+
Subjt:  MSNDAKRSIQGNLMVKSVSEDRKPPA---AGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN

A0A6J1KH59 Dynein light chain1.3e-3689.13Show/hide
Query:  MSNDAKRSIQGNLMVKSVSEDRKPPA---AGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN
        MSNDAKRSIQGN MVK+VSEDRKP A    GKKIVIKSADMFGDVQKEAVD+AI AFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFG+
Subjt:  MSNDAKRSIQGNLMVKSVSEDRKPPA---AGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN

A0A6J1L253 Dynein light chain9.3e-3891.3Show/hide
Query:  MSNDAKRSIQGNLMVKSVSEDRKP---PAAGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN
        MSNDAKRSIQGNLMVKSVSEDRKP      GKKIVIKSADMFGDVQKEA+DVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFG+
Subjt:  MSNDAKRSIQGNLMVKSVSEDRKP---PAAGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN

SwissProt top hitse value%identityAlignment
Q22799 Dynein light chain 1, cytoplasmic7.9e-1863.93Show/hide
Query:  KKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN
        +K VIK+ADM  D+Q++A+D A  A EK+++EKD+A YIKKEFDK++ PTWHCIVGRNFG+
Subjt:  KKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN

Q3MHR3 Dynein light chain 2, cytoplasmic7.9e-1865.57Show/hide
Query:  KKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN
        +K VIK+ADM  D+Q++AVD A  A EK+++EKD+A YIKKEFDK++ PTWHCIVGRNFG+
Subjt:  KKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN

Q78P75 Dynein light chain 2, cytoplasmic7.9e-1865.57Show/hide
Query:  KKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN
        +K VIK+ADM  D+Q++AVD A  A EK+++EKD+A YIKKEFDK++ PTWHCIVGRNFG+
Subjt:  KKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN

Q96FJ2 Dynein light chain 2, cytoplasmic7.9e-1865.57Show/hide
Query:  KKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN
        +K VIK+ADM  D+Q++AVD A  A EK+++EKD+A YIKKEFDK++ PTWHCIVGRNFG+
Subjt:  KKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN

Q9D0M5 Dynein light chain 2, cytoplasmic7.9e-1865.57Show/hide
Query:  KKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN
        +K VIK+ADM  D+Q++AVD A  A EK+++EKD+A YIKKEFDK++ PTWHCIVGRNFG+
Subjt:  KKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN

Arabidopsis top hitse value%identityAlignment
AT1G52240.2 RHO guanyl-nucleotide exchange factor 113.2e-0640.98Show/hide
Query:  KIVIKSADMFGDVQKEAVDVAIAAFEKHSVE--KDVAEYIKKEFDKRHGPTWHCIVGRNFG
        K +++ +DM   +Q +A+  A  A +   V   K +A +IKKEFD+R+G  W C+VG NFG
Subjt:  KIVIKSADMFGDVQKEAVDVAIAAFEKHSVE--KDVAEYIKKEFDKRHGPTWHCIVGRNFG

AT3G16120.1 Dynein light chain type 1 family protein1.6e-0537.7Show/hide
Query:  KIVIKSADMFGDVQKEAVDVAIAAFEKHSV--EKDVAEYIKKEFDKRHGPTWHCIVGRNFG
        K  ++  DM   +Q +A+ +A  + +   V     +A +IKKEFD+R+G  W C+VG NFG
Subjt:  KIVIKSADMFGDVQKEAVDVAIAAFEKHSV--EKDVAEYIKKEFDKRHGPTWHCIVGRNFG

AT4G15930.1 Dynein light chain type 1 family protein2.4e-2558.7Show/hide
Query:  KRSIQGNLMVKSVSEDRK--------PPAAGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN
        K+S+ G    +++ +DR+         P AGK+ VIKSADM  D+QKEA+++AI+AFEK+SVEKD+AE IKKEFDK+HG TWHCIVGRNFG+
Subjt:  KRSIQGNLMVKSVSEDRK--------PPAAGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN

AT4G27360.1 Dynein light chain type 1 family protein2.1e-0537.1Show/hide
Query:  KIVIKSADMFGDVQKEAVDVAIAAFEKHSVEK--DVAEYIKKEFDKRHGPTWHCIVGRNFGN
        K V+   DM   ++++A+ +A  A +   V +   +A +IKKEFD+ +G  W CIVG +FG+
Subjt:  KIVIKSADMFGDVQKEAVDVAIAAFEKHSVEK--DVAEYIKKEFDKRHGPTWHCIVGRNFGN

AT5G20110.1 Dynein light chain type 1 family protein2.4e-0639.08Show/hide
Query:  QGNLMVKSVSED--RKPPAAGKKIVIK--SADMFGDVQKEAVDVA---IAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN
        +G   V  V  D   +  AA + + ++  +ADM G +Q  A   A   + + EK S  K +A  +KKEFDK +GP WHCIVG +FG+
Subjt:  QGNLMVKSVSED--RKPPAAGKKIVIK--SADMFGDVQKEAVDVA---IAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAACGATGCGAAGAGAAGCATTCAAGGGAATCTAATGGTGAAATCTGTATCGGAAGATCGGAAACCGCCGGCCGCCGGCAAGAAAATTGTCATTAAGAGTGCCGA
TATGTTTGGTGATGTGCAGAAGGAGGCTGTTGATGTTGCCATAGCTGCATTTGAAAAGCATAGTGTAGAGAAGGATGTAGCGGAGTATATTAAGAAAGAGTTCGATAAGA
GGCATGGACCGACCTGGCATTGCATTGTGGGCCGTAATTTTGGTAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCAACGATGCGAAGAGAAGCATTCAAGGGAATCTAATGGTGAAATCTGTATCGGAAGATCGGAAACCGCCGGCCGCCGGCAAGAAAATTGTCATTAAGAGTGCCGA
TATGTTTGGTGATGTGCAGAAGGAGGCTGTTGATGTTGCCATAGCTGCATTTGAAAAGCATAGTGTAGAGAAGGATGTAGCGGAGTATATTAAGAAAGAGTTCGATAAGA
GGCATGGACCGACCTGGCATTGCATTGTGGGCCGTAATTTTGGTAACTGA
Protein sequenceShow/hide protein sequence
MSNDAKRSIQGNLMVKSVSEDRKPPAAGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN