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Lag0031493 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031493
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPMD domain-containing protein
Genome locationchr11:9227045..9227789
RNA-Seq ExpressionLag0031493
SyntenyLag0031493
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041618.1 hypothetical protein E6C27_scaffold93G00910 [Cucumis melo var. makuwa]6.7e-1835.37Show/hide
Query:  FQIFLPARTLNPQDHVISRYRSWWSEKYDNYLGDGVSKLVDNTTPSRTQPKPPTKNDSKFGGKELRLLKVVRP--LDDSTEEESQNSTGDRHWKRAKRPR
        F+++LPAR+L P  HV  R+  WW+ K+  Y  D    LV +  P  +QP+ P    S  GGKE+RL++ + P   ++  E ES +S  D HW   KRP 
Subjt:  FQIFLPARTLNPQDHVISRYRSWWSEKYDNYLGDGVSKLVDNTTPSRTQPKPPTKNDSKFGGKELRLLKVVRP--LDDSTEEESQNSTGDRHWKRAKRPR

Query:  KYSDLADKSIKSASIASQTPDDIENLLPSNDRAQEEEECSSDQSLTSPDAFVSSVKNFGTPMHP
        K + ++D       +++    D+  L P ND  +   E  SD+SLT P A  S+ +  GT   P
Subjt:  KYSDLADKSIKSASIASQTPDDIENLLPSNDRAQEEEECSSDQSLTSPDAFVSSVKNFGTPMHP

KAA0050516.1 hypothetical protein E6C27_scaffold175G001600 [Cucumis melo var. makuwa]5.7e-1736.02Show/hide
Query:  QIFLPARTLNPQDHVISRYRSWWSEKYDNYLGDGVSKLVDNTTPSRTQPKPPTKNDSKFGGKELRLLKVVRP-LDDSTEE---ESQNSTGDRHWKRAKRP
        +++LPAR+L P  HV  ++  WW+ K+  Y  D    LV +  PS +QP+ P    S  GGKE+RL++ + P L++  +E   ES NS  DRHW   KRP
Subjt:  QIFLPARTLNPQDHVISRYRSWWSEKYDNYLGDGVSKLVDNTTPSRTQPKPPTKNDSKFGGKELRLLKVVRP-LDDSTEE---ESQNSTGDRHWKRAKRP

Query:  RKYSDLADKSIKSASIASQTPDDIENLLPSNDRAQEEEECSSDQSLTSPDAFVSSVKNFGT
         K + ++        +++    D+  L P ND  +   E  SD+SLT P A  S+ +  GT
Subjt:  RKYSDLADKSIKSASIASQTPDDIENLLPSNDRAQEEEECSSDQSLTSPDAFVSSVKNFGT

KAA0053466.1 hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa]4.4e-1734.97Show/hide
Query:  QIFLPARTLNPQDHVISRYRSWWSEKYDNYLGDGVSKLVDNTTPSRTQPKPPTKNDSKFGGKELRLLKVVRP--LDDSTEEESQNSTGDRHWKRAKRPRK
        +++LP R+L P  HV  R+  WW+ K+ NY  D    LV +  P  +QP+ P    S  GGKE+RL++ + P   D+  E ES ++  DRHW   KRP K
Subjt:  QIFLPARTLNPQDHVISRYRSWWSEKYDNYLGDGVSKLVDNTTPSRTQPKPPTKNDSKFGGKELRLLKVVRP--LDDSTEEESQNSTGDRHWKRAKRPRK

Query:  YSDLADKSIKSASIASQTPDDIENLLPSNDRAQEEEECSSDQSLTSPDAFVSSVKNFGTPMHP
         + ++        +++    D+  L P ND  +   E  SD+SLT P A  S+ +  GT   P
Subjt:  YSDLADKSIKSASIASQTPDDIENLLPSNDRAQEEEECSSDQSLTSPDAFVSSVKNFGTPMHP

KAA0057575.1 hypothetical protein E6C27_scaffold497G00470 [Cucumis melo var. makuwa]7.5e-1735.22Show/hide
Query:  QIFLPARTLNPQDHVISRYRSWWSEKYDNYLGDGVSKLVDNTTPSRTQPKPPTKNDSKFGGKELRLLKVVRP--LDDSTEEESQNSTGDRHWKRAKRPRK
        +++LPAR+L P  HV  R+  WW+ K+  Y  D    LV +  P  +QP+ P    S  GGKE+RL++ + P   D+  E ES ++  DRHW   KRP K
Subjt:  QIFLPARTLNPQDHVISRYRSWWSEKYDNYLGDGVSKLVDNTTPSRTQPKPPTKNDSKFGGKELRLLKVVRP--LDDSTEEESQNSTGDRHWKRAKRPRK

Query:  YSDLADKSIKSASIASQTPDDIENLLPSNDRAQEEEECSSDQSLTSPDAFVSSVKNFGT
         + ++        +++    D+  L P ND  +   E  SD+SLT P A  S+ +  GT
Subjt:  YSDLADKSIKSASIASQTPDDIENLLPSNDRAQEEEECSSDQSLTSPDAFVSSVKNFGT

TYK19639.1 hypothetical protein E5676_scaffold242G00260 [Cucumis melo var. makuwa]4.4e-1734.76Show/hide
Query:  FQIFLPARTLNPQDHVISRYRSWWSEKYDNYLGDGVSKLVDNTTPSRTQPKPPTKNDSKFGGKELRLLKVVRP--LDDSTEEESQNSTGDRHWKRAKRPR
        F+++LPAR+L P  HV  R+  WW+ K+  Y  D    LV +  P  +QP+ P    S  GGKE+RL++ + P   ++  E ES +S  D HW   KRP 
Subjt:  FQIFLPARTLNPQDHVISRYRSWWSEKYDNYLGDGVSKLVDNTTPSRTQPKPPTKNDSKFGGKELRLLKVVRP--LDDSTEEESQNSTGDRHWKRAKRPR

Query:  KYSDLADKSIKSASIASQTPDDIENLLPSNDRAQEEEECSSDQSLTSPDAFVSSVKNFGTPMHP
        K + ++        +++    D+  L P ND  +   E  SD+SLT P A  S+ +  GT   P
Subjt:  KYSDLADKSIKSASIASQTPDDIENLLPSNDRAQEEEECSSDQSLTSPDAFVSSVKNFGTPMHP

TrEMBL top hitse value%identityAlignment
A0A5A7TFC8 PMD domain-containing protein3.3e-1835.37Show/hide
Query:  FQIFLPARTLNPQDHVISRYRSWWSEKYDNYLGDGVSKLVDNTTPSRTQPKPPTKNDSKFGGKELRLLKVVRP--LDDSTEEESQNSTGDRHWKRAKRPR
        F+++LPAR+L P  HV  R+  WW+ K+  Y  D    LV +  P  +QP+ P    S  GGKE+RL++ + P   ++  E ES +S  D HW   KRP 
Subjt:  FQIFLPARTLNPQDHVISRYRSWWSEKYDNYLGDGVSKLVDNTTPSRTQPKPPTKNDSKFGGKELRLLKVVRP--LDDSTEEESQNSTGDRHWKRAKRPR

Query:  KYSDLADKSIKSASIASQTPDDIENLLPSNDRAQEEEECSSDQSLTSPDAFVSSVKNFGTPMHP
        K + ++D       +++    D+  L P ND  +   E  SD+SLT P A  S+ +  GT   P
Subjt:  KYSDLADKSIKSASIASQTPDDIENLLPSNDRAQEEEECSSDQSLTSPDAFVSSVKNFGTPMHP

A0A5A7U8L3 PMD domain-containing protein2.8e-1736.02Show/hide
Query:  QIFLPARTLNPQDHVISRYRSWWSEKYDNYLGDGVSKLVDNTTPSRTQPKPPTKNDSKFGGKELRLLKVVRP-LDDSTEE---ESQNSTGDRHWKRAKRP
        +++LPAR+L P  HV  ++  WW+ K+  Y  D    LV +  PS +QP+ P    S  GGKE+RL++ + P L++  +E   ES NS  DRHW   KRP
Subjt:  QIFLPARTLNPQDHVISRYRSWWSEKYDNYLGDGVSKLVDNTTPSRTQPKPPTKNDSKFGGKELRLLKVVRP-LDDSTEE---ESQNSTGDRHWKRAKRP

Query:  RKYSDLADKSIKSASIASQTPDDIENLLPSNDRAQEEEECSSDQSLTSPDAFVSSVKNFGT
         K + ++        +++    D+  L P ND  +   E  SD+SLT P A  S+ +  GT
Subjt:  RKYSDLADKSIKSASIASQTPDDIENLLPSNDRAQEEEECSSDQSLTSPDAFVSSVKNFGT

A0A5A7UGW6 PMD domain-containing protein2.1e-1734.97Show/hide
Query:  QIFLPARTLNPQDHVISRYRSWWSEKYDNYLGDGVSKLVDNTTPSRTQPKPPTKNDSKFGGKELRLLKVVRP--LDDSTEEESQNSTGDRHWKRAKRPRK
        +++LP R+L P  HV  R+  WW+ K+ NY  D    LV +  P  +QP+ P    S  GGKE+RL++ + P   D+  E ES ++  DRHW   KRP K
Subjt:  QIFLPARTLNPQDHVISRYRSWWSEKYDNYLGDGVSKLVDNTTPSRTQPKPPTKNDSKFGGKELRLLKVVRP--LDDSTEEESQNSTGDRHWKRAKRPRK

Query:  YSDLADKSIKSASIASQTPDDIENLLPSNDRAQEEEECSSDQSLTSPDAFVSSVKNFGTPMHP
         + ++        +++    D+  L P ND  +   E  SD+SLT P A  S+ +  GT   P
Subjt:  YSDLADKSIKSASIASQTPDDIENLLPSNDRAQEEEECSSDQSLTSPDAFVSSVKNFGTPMHP

A0A5A7UVI5 PMD domain-containing protein3.6e-1735.22Show/hide
Query:  QIFLPARTLNPQDHVISRYRSWWSEKYDNYLGDGVSKLVDNTTPSRTQPKPPTKNDSKFGGKELRLLKVVRP--LDDSTEEESQNSTGDRHWKRAKRPRK
        +++LPAR+L P  HV  R+  WW+ K+  Y  D    LV +  P  +QP+ P    S  GGKE+RL++ + P   D+  E ES ++  DRHW   KRP K
Subjt:  QIFLPARTLNPQDHVISRYRSWWSEKYDNYLGDGVSKLVDNTTPSRTQPKPPTKNDSKFGGKELRLLKVVRP--LDDSTEEESQNSTGDRHWKRAKRPRK

Query:  YSDLADKSIKSASIASQTPDDIENLLPSNDRAQEEEECSSDQSLTSPDAFVSSVKNFGT
         + ++        +++    D+  L P ND  +   E  SD+SLT P A  S+ +  GT
Subjt:  YSDLADKSIKSASIASQTPDDIENLLPSNDRAQEEEECSSDQSLTSPDAFVSSVKNFGT

A0A5D3D7V4 PMD domain-containing protein2.1e-1734.76Show/hide
Query:  FQIFLPARTLNPQDHVISRYRSWWSEKYDNYLGDGVSKLVDNTTPSRTQPKPPTKNDSKFGGKELRLLKVVRP--LDDSTEEESQNSTGDRHWKRAKRPR
        F+++LPAR+L P  HV  R+  WW+ K+  Y  D    LV +  P  +QP+ P    S  GGKE+RL++ + P   ++  E ES +S  D HW   KRP 
Subjt:  FQIFLPARTLNPQDHVISRYRSWWSEKYDNYLGDGVSKLVDNTTPSRTQPKPPTKNDSKFGGKELRLLKVVRP--LDDSTEEESQNSTGDRHWKRAKRPR

Query:  KYSDLADKSIKSASIASQTPDDIENLLPSNDRAQEEEECSSDQSLTSPDAFVSSVKNFGTPMHP
        K + ++        +++    D+  L P ND  +   E  SD+SLT P A  S+ +  GT   P
Subjt:  KYSDLADKSIKSASIASQTPDDIENLLPSNDRAQEEEECSSDQSLTSPDAFVSSVKNFGTPMHP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTATCTGTCAGCGCGATTGTGGAGTTTCAAATATTTCTTCCAGCTCGTACATTGAACCCTCAAGACCATGTCATCTCACGTTACCGAAGTTGGTGGTCTGAAAAGTA
TGATAATTACCTAGGGGACGGCGTAAGTAAGTTGGTTGACAATACTACTCCTTCTCGAACCCAGCCTAAGCCACCTACAAAAAATGATTCTAAATTTGGGGGCAAAGAAC
TCCGTCTGCTCAAGGTTGTCAGGCCTCTAGATGATTCGACCGAAGAAGAGAGTCAAAACAGCACTGGAGATCGACACTGGAAAAGAGCCAAAAGACCCAGGAAATATTCT
GATCTCGCAGACAAGTCCATCAAGAGTGCCTCTATTGCTTCACAGACTCCTGACGACATCGAGAATTTGCTTCCTTCAAATGACCGTGCTCAAGAAGAGGAAGAATGTTC
GAGCGATCAGTCTTTGACAAGTCCTGATGCTTTTGTTTCTTCTGTGAAGAACTTCGGAACTCCCATGCATCCTCGAGCAAACAAGTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTATCTGTCAGCGCGATTGTGGAGTTTCAAATATTTCTTCCAGCTCGTACATTGAACCCTCAAGACCATGTCATCTCACGTTACCGAAGTTGGTGGTCTGAAAAGTA
TGATAATTACCTAGGGGACGGCGTAAGTAAGTTGGTTGACAATACTACTCCTTCTCGAACCCAGCCTAAGCCACCTACAAAAAATGATTCTAAATTTGGGGGCAAAGAAC
TCCGTCTGCTCAAGGTTGTCAGGCCTCTAGATGATTCGACCGAAGAAGAGAGTCAAAACAGCACTGGAGATCGACACTGGAAAAGAGCCAAAAGACCCAGGAAATATTCT
GATCTCGCAGACAAGTCCATCAAGAGTGCCTCTATTGCTTCACAGACTCCTGACGACATCGAGAATTTGCTTCCTTCAAATGACCGTGCTCAAGAAGAGGAAGAATGTTC
GAGCGATCAGTCTTTGACAAGTCCTGATGCTTTTGTTTCTTCTGTGAAGAACTTCGGAACTCCCATGCATCCTCGAGCAAACAAGTCATGA
Protein sequenceShow/hide protein sequence
MLSVSAIVEFQIFLPARTLNPQDHVISRYRSWWSEKYDNYLGDGVSKLVDNTTPSRTQPKPPTKNDSKFGGKELRLLKVVRPLDDSTEEESQNSTGDRHWKRAKRPRKYS
DLADKSIKSASIASQTPDDIENLLPSNDRAQEEEECSSDQSLTSPDAFVSSVKNFGTPMHPRANKS