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Lag0031498 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031498
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr11:9246372..9246698
RNA-Seq ExpressionLag0031498
SyntenyLag0031498
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KJB61259.1 hypothetical protein B456_009G348600, partial [Gossypium raimondii]1.2e-0936.11Show/hide
Query:  MDLFNLSMVEWLGNAIGQFKEYDNGGRGNGWNESLSVQVTLDITKLLRRCVKVNLGEPMGSCWTPIKYEKLLELWSFCGVIGQTVKDCTLFYQGDGSSNQ
        ++L +  M   +GNAIG     D   R  GW E + ++V +++ K LRR VK+ +G         +KY++L +    CG+IG TVK CTL  + DG +  
Subjt:  MDLFNLSMVEWLGNAIGQFKEYDNGGRGNGWNESLSVQVTLDITKLLRRCVKVNLGEPMGSCWTPIKYEKLLELWSFCGVIGQTVKDCTLFYQGDGSSNQ

Query:  RHQYSMWM
          QY  WM
Subjt:  RHQYSMWM

MBA0592182.1 hypothetical protein [Gossypium raimondii]7.1e-1035.19Show/hide
Query:  MDLFNLSMVEWLGNAIGQFKEYDNGGRGNGWNESLSVQVTLDITKLLRRCVKVNLGEPMGSCWTPIKYEKLLELWSFCGVIGQTVKDCTLFYQGDGSSNQ
        ++L +  M   +GNAIG+    D   R  GW E + +++ +++ KLLRR VK+ + +        +KYE+L +    C +IG T K C+LF + DG + Q
Subjt:  MDLFNLSMVEWLGNAIGQFKEYDNGGRGNGWNESLSVQVTLDITKLLRRCVKVNLGEPMGSCWTPIKYEKLLELWSFCGVIGQTVKDCTLFYQGDGSSNQ

Query:  RHQYSMWM
          QY  WM
Subjt:  RHQYSMWM

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]7.6e-1238.46Show/hide
Query:  NLSMVEWLGNAIGQFKEYDNGGRGNGWNESLSVQVTLDITKLLRRCVKVNLGEPMGSCWTPIKYEKLLELWSFCGVIGQTVKDCTLFYQGDGSSNQRHQY
        N +M   LGNAIG F++ ++      W   L V+V  D+ K L R +K+NL  PMG CW PI+YE+L +    CG +   +KDC+       S N   QY
Subjt:  NLSMVEWLGNAIGQFKEYDNGGRGNGWNESLSVQVTLDITKLLRRCVKVNLGEPMGSCWTPIKYEKLLELWSFCGVIGQTVKDCTLFYQGDGSSNQRHQY

Query:  SMWM
          W+
Subjt:  SMWM

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]2.7e-1743.12Show/hide
Query:  MDLFNLSMVEWLGNAIGQFKEYDNGGRGNGWNESLSVQVTLDITKLLRRCVKVNLGEPMGSCWTPIKYEKLLELWSFCGVIGQTVKDCTLFY-QGDGSSN
        M   N +M   LGNAIG F + D   +G  W  SL ++V +DITK LRR +K+N+  PMG CW PI+YE+L +   FCGVIG +  DC   Y      S 
Subjt:  MDLFNLSMVEWLGNAIGQFKEYDNGGRGNGWNESLSVQVTLDITKLLRRCVKVNLGEPMGSCWTPIKYEKLLELWSFCGVIGQTVKDCTLFY-QGDGSSN

Query:  QRHQYSMWM
           +Y  W+
Subjt:  QRHQYSMWM

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.4e-1039.18Show/hide
Query:  LGNAIGQFKEYDNGGRGNGWNESLSVQVTLDITKLLRRCVKVNLGEPMGSCWTPIKYEKLLELWSFCGVIGQTVKDCTLFYQGDGSSNQRHQYSMWM
        LGNA+G F+E D       W  +L V+V LDI+K LRR +K+NL  P+G  W PI+YE+L +    CG+                SS ++HQY  W+
Subjt:  LGNAIGQFKEYDNGGRGNGWNESLSVQVTLDITKLLRRCVKVNLGEPMGSCWTPIKYEKLLELWSFCGVIGQTVKDCTLFYQGDGSSNQRHQYSMWM

TrEMBL top hitse value%identityAlignment
A0A0D2TX01 CCHC-type domain-containing protein (Fragment)5.8e-1036.11Show/hide
Query:  MDLFNLSMVEWLGNAIGQFKEYDNGGRGNGWNESLSVQVTLDITKLLRRCVKVNLGEPMGSCWTPIKYEKLLELWSFCGVIGQTVKDCTLFYQGDGSSNQ
        ++L +  M   +GNAIG     D   R  GW E + ++V +++ K LRR VK+ +G         +KY++L +    CG+IG TVK CTL  + DG +  
Subjt:  MDLFNLSMVEWLGNAIGQFKEYDNGGRGNGWNESLSVQVTLDITKLLRRCVKVNLGEPMGSCWTPIKYEKLLELWSFCGVIGQTVKDCTLFYQGDGSSNQ

Query:  RHQYSMWM
          QY  WM
Subjt:  RHQYSMWM

A0A2P5YRD8 CCHC-type domain-containing protein1.0e-0936.36Show/hide
Query:  MDLFNLSMVEWLGNAIGQFKEYDNGGRGNGWNESLSVQVTLDITKLLRRCVKV--NLGEPMGSCWTPIKYEKLLELWSFCGVIGQTVKDCTLFYQGDGSS
        ++L +  +   +GNAIG+    D   R  GW E + ++V +D+ KLLRR V++    GE        IKYE+LL+    CGVIG T+K C    +  GS+
Subjt:  MDLFNLSMVEWLGNAIGQFKEYDNGGRGNGWNESLSVQVTLDITKLLRRCVKV--NLGEPMGSCWTPIKYEKLLELWSFCGVIGQTVKDCTLFYQGDGSS

Query:  NQRHQYSMWM
            Q+  WM
Subjt:  NQRHQYSMWM

A0A6J1BSZ1 uncharacterized protein LOC1110054813.7e-1238.46Show/hide
Query:  NLSMVEWLGNAIGQFKEYDNGGRGNGWNESLSVQVTLDITKLLRRCVKVNLGEPMGSCWTPIKYEKLLELWSFCGVIGQTVKDCTLFYQGDGSSNQRHQY
        N +M   LGNAIG F++ ++      W   L V+V  D+ K L R +K+NL  PMG CW PI+YE+L +    CG +   +KDC+       S N   QY
Subjt:  NLSMVEWLGNAIGQFKEYDNGGRGNGWNESLSVQVTLDITKLLRRCVKVNLGEPMGSCWTPIKYEKLLELWSFCGVIGQTVKDCTLFYQGDGSSNQRHQY

Query:  SMWM
          W+
Subjt:  SMWM

A0A6J1DU55 uncharacterized protein LOC1110231351.3e-1743.12Show/hide
Query:  MDLFNLSMVEWLGNAIGQFKEYDNGGRGNGWNESLSVQVTLDITKLLRRCVKVNLGEPMGSCWTPIKYEKLLELWSFCGVIGQTVKDCTLFY-QGDGSSN
        M   N +M   LGNAIG F + D   +G  W  SL ++V +DITK LRR +K+N+  PMG CW PI+YE+L +   FCGVIG +  DC   Y      S 
Subjt:  MDLFNLSMVEWLGNAIGQFKEYDNGGRGNGWNESLSVQVTLDITKLLRRCVKVNLGEPMGSCWTPIKYEKLLELWSFCGVIGQTVKDCTLFY-QGDGSSN

Query:  QRHQYSMWM
           +Y  W+
Subjt:  QRHQYSMWM

A0A6J1DX30 uncharacterized protein LOC1110248741.2e-1039.18Show/hide
Query:  LGNAIGQFKEYDNGGRGNGWNESLSVQVTLDITKLLRRCVKVNLGEPMGSCWTPIKYEKLLELWSFCGVIGQTVKDCTLFYQGDGSSNQRHQYSMWM
        LGNA+G F+E D       W  +L V+V LDI+K LRR +K+NL  P+G  W PI+YE+L +    CG+                SS ++HQY  W+
Subjt:  LGNAIGQFKEYDNGGRGNGWNESLSVQVTLDITKLLRRCVKVNLGEPMGSCWTPIKYEKLLELWSFCGVIGQTVKDCTLFYQGDGSSNQRHQYSMWM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCTCTTCAACCTATCCATGGTCGAGTGGTTAGGCAATGCAATCGGGCAGTTCAAAGAGTATGACAATGGAGGGCGTGGAAATGGATGGAATGAGAGCCTCAGCGT
TCAGGTAACTTTGGATATCACTAAGCTGCTTCGGCGTTGTGTTAAGGTGAATTTAGGTGAACCCATGGGAAGCTGCTGGACGCCAATCAAGTACGAAAAATTGTTGGAGC
TTTGGTCGTTTTGCGGAGTCATAGGCCAGACTGTCAAGGATTGTACATTATTCTATCAAGGGGATGGTTCGTCGAACCAACGACACCAGTACAGTATGTGGATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATCTCTTCAACCTATCCATGGTCGAGTGGTTAGGCAATGCAATCGGGCAGTTCAAAGAGTATGACAATGGAGGGCGTGGAAATGGATGGAATGAGAGCCTCAGCGT
TCAGGTAACTTTGGATATCACTAAGCTGCTTCGGCGTTGTGTTAAGGTGAATTTAGGTGAACCCATGGGAAGCTGCTGGACGCCAATCAAGTACGAAAAATTGTTGGAGC
TTTGGTCGTTTTGCGGAGTCATAGGCCAGACTGTCAAGGATTGTACATTATTCTATCAAGGGGATGGTTCGTCGAACCAACGACACCAGTACAGTATGTGGATGTAG
Protein sequenceShow/hide protein sequence
MDLFNLSMVEWLGNAIGQFKEYDNGGRGNGWNESLSVQVTLDITKLLRRCVKVNLGEPMGSCWTPIKYEKLLELWSFCGVIGQTVKDCTLFYQGDGSSNQRHQYSMWM