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Lag0031507 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031507
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr11:9379825..9380328
RNA-Seq ExpressionLag0031507
SyntenyLag0031507
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015381281.1 uncharacterized protein LOC107174698 [Citrus sinensis]1.6e-2438.18Show/hide
Query:  EDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIELCVIGKVFSSKRVNVEAFRSVMRAAWRVHGVTRIESAVENLFAIQFHSRGEKGCVMSTGPWAFDR
        E+LV +  +  L EEE ++V             +  C++GKV  +++VN E  +  M+ AWR     +IES  EN F  +F    EK  V+  GPW FDR
Subjt:  EDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIELCVIGKVFSSKRVNVEAFRSVMRAAWRVHGVTRIESAVENLFAIQFHSRGEKGCVMSTGPWAFDR

Query:  SLVVLKEPRSAGSVLDVEFNYCAFWVQIHNVPMRWQTREMARQLGDKFGTVEEVGGSQGGDWTGI
        +L+VL EP   G++ +  F + +FWVQ+HN+PM    RE  ++LG K G VEEV     GD  G+
Subjt:  SLVVLKEPRSAGSVLDVEFNYCAFWVQIHNVPMRWQTREMARQLGDKFGTVEEVGGSQGGDWTGI

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]1.4e-3643.64Show/hide
Query:  MEDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIELCVIGKVFSSKRVNVEAFRSVMRAAWRVHGVTRIESAVENLFAIQFHSRGEKGCVMSTGPWAFD
        M+++   W  ++ T +E E V    G P+L+  +++LCV+ K+ +SKR++ EA RSVM++ WRVH  TR E    N++ I F S  EK  V+S+GPW F+
Subjt:  MEDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIELCVIGKVFSSKRVNVEAFRSVMRAAWRVHGVTRIESAVENLFAIQFHSRGEKGCVMSTGPWAFD

Query:  RSLVVLKEPRSAGSVLDVEFNYCAFWVQIHNVPMRWQTREMARQLGDKFGTVEEVGGSQGGDWTG
        +SL+VL  P +    LD+ FN+CAFW+QIHN+P    + EMA  LG K G VEE+ G     W G
Subjt:  RSLVVLKEPRSAGSVLDVEFNYCAFWVQIHNVPMRWQTREMARQLGDKFGTVEEVGGSQGGDWTG

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]5.0e-3138.79Show/hide
Query:  MEDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIELCVIGKVFSSKRVNVEAFRSVMRAAWRVHGVTRIESAVENLFAIQFHSRGEKGCVMSTGPWAFD
        M+++   W ++ LT+E+ E +      P+++  +++   +GK+ +SKR++VEAFRSVM++ W+VH  T IE+A  NL+ I F S  EK  V+++GPW+F+
Subjt:  MEDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIELCVIGKVFSSKRVNVEAFRSVMRAAWRVHGVTRIESAVENLFAIQFHSRGEKGCVMSTGPWAFD

Query:  RSLVVLKEPRSAGSVLDVEFNYCAFWVQIHNVPMRWQTREMARQLGDKFGTVEEVGGSQGGDWTG
         SL+VL  P +     D+ FN+ A W+QIH +P +   ++MA+ LG + G VEE+  +   +WTG
Subjt:  RSLVVLKEPRSAGSVLDVEFNYCAFWVQIHNVPMRWQTREMARQLGDKFGTVEEVGGSQGGDWTG

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]4.9e-3442.33Show/hide
Query:  MEDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIELCVIGKVFSSKRVNVEAFRSVMRAAWRVHGVTRIESAVENLFAIQFHSRGEKGCVMSTGPWAFD
        M+D+   W ++ L +EE + +      P+L++ +I+LC +GK+  SKR+ VEAF SVM+  W++H  TRIE+A  N++ I F +  EK  V S GPW FD
Subjt:  MEDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIELCVIGKVFSSKRVNVEAFRSVMRAAWRVHGVTRIESAVENLFAIQFHSRGEKGCVMSTGPWAFD

Query:  RSLVVLKEPRSAGSVLDVEFNYCAFWVQIHNVPMRWQTREMARQLGDKFGTVEEVGGSQGGDW
        +SL++L    +A   LD++ + CAFWVQIH +     T++MA+ LG + G VEEV G    DW
Subjt:  RSLVVLKEPRSAGSVLDVEFNYCAFWVQIHNVPMRWQTREMARQLGDKFGTVEEVGGSQGGDW

XP_022158119.1 uncharacterized protein LOC111024676, partial [Momordica charantia]2.6e-3545.81Show/hide
Query:  MEDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIELCVIGKVFSSKRVNVEAFRSVMRAAWRVHGVTRIESAVENLFAIQFHSRGEKGCVMSTGPWAFD
        M+++   W ++ LT EE E        P+L+  +I+LC +GK+ +SKR++ +A  SVM+  W++H  TRIE+A  N++ I F +  EK  V+S+GPW FD
Subjt:  MEDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIELCVIGKVFSSKRVNVEAFRSVMRAAWRVHGVTRIESAVENLFAIQFHSRGEKGCVMSTGPWAFD

Query:  RSLVVLKEPRSAGSVLDVEFNYCAFWVQIHNVPMRWQTREMARQLGDKFGTVEEV
        +SL VL  P +A   LDV+F +CAFWVQIH +P  + TR+MA+ LGD+ G VEEV
Subjt:  RSLVVLKEPRSAGSVLDVEFNYCAFWVQIHNVPMRWQTREMARQLGDKFGTVEEV

TrEMBL top hitse value%identityAlignment
A0A5C7HLR9 DUF4283 domain-containing protein4.9e-2436.77Show/hide
Query:  MEDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIELCVIGKVFSSKRVNVEAFRSVMRAAWRVHGVTRIESAVENLFAIQFHSRGEKGCVMSTGPWAFD
        + D+ S  N+  + E+E                 + LC++GKV +SK VN EAFR V++  WRV+G   IE+  +N+F  QF S   +  ++S GPW FD
Subjt:  MEDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIELCVIGKVFSSKRVNVEAFRSVMRAAWRVHGVTRIESAVENLFAIQFHSRGEKGCVMSTGPWAFD

Query:  RSLVVLKEPRSAGSVLDVEFNYCAFWVQIHNVPMRWQTREMARQLGDKFGTVEEV
         ++++ +EP  +G + ++EFN   FWVQIHN+P+   T E+   LG+  G V  V
Subjt:  RSLVVLKEPRSAGSVLDVEFNYCAFWVQIHNVPMRWQTREMARQLGDKFGTVEEV

A0A6J1D765 uncharacterized protein LOC1110179026.6e-3743.64Show/hide
Query:  MEDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIELCVIGKVFSSKRVNVEAFRSVMRAAWRVHGVTRIESAVENLFAIQFHSRGEKGCVMSTGPWAFD
        M+++   W  ++ T +E E V    G P+L+  +++LCV+ K+ +SKR++ EA RSVM++ WRVH  TR E    N++ I F S  EK  V+S+GPW F+
Subjt:  MEDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIELCVIGKVFSSKRVNVEAFRSVMRAAWRVHGVTRIESAVENLFAIQFHSRGEKGCVMSTGPWAFD

Query:  RSLVVLKEPRSAGSVLDVEFNYCAFWVQIHNVPMRWQTREMARQLGDKFGTVEEVGGSQGGDWTG
        +SL+VL  P +    LD+ FN+CAFW+QIHN+P    + EMA  LG K G VEE+ G     W G
Subjt:  RSLVVLKEPRSAGSVLDVEFNYCAFWVQIHNVPMRWQTREMARQLGDKFGTVEEVGGSQGGDWTG

A0A6J1DP89 uncharacterized protein LOC1110229322.4e-3138.79Show/hide
Query:  MEDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIELCVIGKVFSSKRVNVEAFRSVMRAAWRVHGVTRIESAVENLFAIQFHSRGEKGCVMSTGPWAFD
        M+++   W ++ LT+E+ E +      P+++  +++   +GK+ +SKR++VEAFRSVM++ W+VH  T IE+A  NL+ I F S  EK  V+++GPW+F+
Subjt:  MEDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIELCVIGKVFSSKRVNVEAFRSVMRAAWRVHGVTRIESAVENLFAIQFHSRGEKGCVMSTGPWAFD

Query:  RSLVVLKEPRSAGSVLDVEFNYCAFWVQIHNVPMRWQTREMARQLGDKFGTVEEVGGSQGGDWTG
         SL+VL  P +     D+ FN+ A W+QIH +P +   ++MA+ LG + G VEE+  +   +WTG
Subjt:  RSLVVLKEPRSAGSVLDVEFNYCAFWVQIHNVPMRWQTREMARQLGDKFGTVEEVGGSQGGDWTG

A0A6J1DVS4 uncharacterized protein LOC1110235552.4e-3442.33Show/hide
Query:  MEDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIELCVIGKVFSSKRVNVEAFRSVMRAAWRVHGVTRIESAVENLFAIQFHSRGEKGCVMSTGPWAFD
        M+D+   W ++ L +EE + +      P+L++ +I+LC +GK+  SKR+ VEAF SVM+  W++H  TRIE+A  N++ I F +  EK  V S GPW FD
Subjt:  MEDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIELCVIGKVFSSKRVNVEAFRSVMRAAWRVHGVTRIESAVENLFAIQFHSRGEKGCVMSTGPWAFD

Query:  RSLVVLKEPRSAGSVLDVEFNYCAFWVQIHNVPMRWQTREMARQLGDKFGTVEEVGGSQGGDW
        +SL++L    +A   LD++ + CAFWVQIH +     T++MA+ LG + G VEEV G    DW
Subjt:  RSLVVLKEPRSAGSVLDVEFNYCAFWVQIHNVPMRWQTREMARQLGDKFGTVEEVGGSQGGDW

A0A6J1DYG3 uncharacterized protein LOC1110246761.3e-3545.81Show/hide
Query:  MEDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIELCVIGKVFSSKRVNVEAFRSVMRAAWRVHGVTRIESAVENLFAIQFHSRGEKGCVMSTGPWAFD
        M+++   W ++ LT EE E        P+L+  +I+LC +GK+ +SKR++ +A  SVM+  W++H  TRIE+A  N++ I F +  EK  V+S+GPW FD
Subjt:  MEDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIELCVIGKVFSSKRVNVEAFRSVMRAAWRVHGVTRIESAVENLFAIQFHSRGEKGCVMSTGPWAFD

Query:  RSLVVLKEPRSAGSVLDVEFNYCAFWVQIHNVPMRWQTREMARQLGDKFGTVEEV
        +SL VL  P +A   LDV+F +CAFWVQIH +P  + TR+MA+ LGD+ G VEEV
Subjt:  RSLVVLKEPRSAGSVLDVEFNYCAFWVQIHNVPMRWQTREMARQLGDKFGTVEEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G42140.1 zinc ion binding;nucleic acid binding7.8e-0628.99Show/hide
Query:  FHSRGEKGCVMSTGPWAFDRSLVVLKEPRSAGSVLDVEFNYCAFWVQIHNVPMRWQTREMARQLGDKFG
        F S      ++  GPW+F+  + V++      S  D EF    FW+QI  +P+R+ T  +   +G++ G
Subjt:  FHSRGEKGCVMSTGPWAFDRSLVVLKEPRSAGSVLDVEFNYCAFWVQIHNVPMRWQTREMARQLGDKFG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGACTTAGTTAGTCGATGGAACTCGTGGAGATTGACAGAGGAGGAGGCAGAGATGGTACGACCAGGGGAGGGGACACCAGTTCTGTCAATGGGCTCGATAGAGCT
GTGTGTGATAGGTAAAGTCTTCTCCTCGAAGCGGGTAAATGTGGAGGCGTTTCGAAGTGTTATGAGGGCAGCATGGAGAGTTCATGGGGTGACGCGCATAGAATCTGCGG
TTGAAAATTTATTTGCTATTCAGTTCCATTCCAGAGGGGAAAAGGGGTGTGTGATGTCGACAGGTCCATGGGCTTTTGATCGGTCTCTGGTGGTTCTGAAAGAGCCGAGG
TCTGCAGGTTCGGTTTTGGATGTGGAGTTTAATTATTGTGCCTTTTGGGTGCAGATTCATAATGTTCCTATGCGTTGGCAGACGAGAGAGATGGCTCGACAGTTGGGAGA
TAAGTTCGGAACCGTGGAGGAAGTTGGTGGATCGCAGGGAGGCGATTGGACTGGAATAGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGACTTAGTTAGTCGATGGAACTCGTGGAGATTGACAGAGGAGGAGGCAGAGATGGTACGACCAGGGGAGGGGACACCAGTTCTGTCAATGGGCTCGATAGAGCT
GTGTGTGATAGGTAAAGTCTTCTCCTCGAAGCGGGTAAATGTGGAGGCGTTTCGAAGTGTTATGAGGGCAGCATGGAGAGTTCATGGGGTGACGCGCATAGAATCTGCGG
TTGAAAATTTATTTGCTATTCAGTTCCATTCCAGAGGGGAAAAGGGGTGTGTGATGTCGACAGGTCCATGGGCTTTTGATCGGTCTCTGGTGGTTCTGAAAGAGCCGAGG
TCTGCAGGTTCGGTTTTGGATGTGGAGTTTAATTATTGTGCCTTTTGGGTGCAGATTCATAATGTTCCTATGCGTTGGCAGACGAGAGAGATGGCTCGACAGTTGGGAGA
TAAGTTCGGAACCGTGGAGGAAGTTGGTGGATCGCAGGGAGGCGATTGGACTGGAATAGGCTAG
Protein sequenceShow/hide protein sequence
MEDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIELCVIGKVFSSKRVNVEAFRSVMRAAWRVHGVTRIESAVENLFAIQFHSRGEKGCVMSTGPWAFDRSLVVLKEPR
SAGSVLDVEFNYCAFWVQIHNVPMRWQTREMARQLGDKFGTVEEVGGSQGGDWTGIG