; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0031515 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031515
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description60S ribosomal protein L38
Genome locationchr11:9455765..9458091
RNA-Seq ExpressionLag0031515
SyntenyLag0031515
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
GO:0006412 - translation (biological process)
GO:0006468 - protein phosphorylation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0035145 - exon-exon junction complex (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0004672 - protein kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR002675 - Ribosomal protein L38e
IPR018545 - Btz domain
IPR038464 - Ribosomal protein L38e superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7028765.1 hypothetical protein SDJN02_09946 [Cucurbita argyrosperma subsp. argyrosperma]7.5e-5381.56Show/hide
Query:  VFCLLHNIRRVIHILEDLSQNVQGPSEFIIGSFDNIKTFKVQSDSEGDVYHRWRLFIVTLSKIFHLLQKAYVGQIVGVFFFSGSSSPKAEKRLNVMFNPR
        + CL+HNIRR IHI EDLSQNVQ PSE + GSF++IK FK QSDSE D   R RLF VTLSKIFHLLQKAY GQIVGV  FSGSSSPKAEK LNVMFNPR
Subjt:  VFCLLHNIRRVIHILEDLSQNVQGPSEFIIGSFDNIKTFKVQSDSEGDVYHRWRLFIVTLSKIFHLLQKAYVGQIVGVFFFSGSSSPKAEKRLNVMFNPR

Query:  LTPCWLVEEVKTNTTIQEVILVRTTLAWITGIILLIATLMG
         TP WLVEEVK NTTIQEVILVRTTLAWITGIILLIATLMG
Subjt:  LTPCWLVEEVKTNTTIQEVILVRTTLAWITGIILLIATLMG

XP_022924693.1 uncharacterized protein LOC111432114 [Cucurbita moschata]1.7e-5280.85Show/hide
Query:  VFCLLHNIRRVIHILEDLSQNVQGPSEFIIGSFDNIKTFKVQSDSEGDVYHRWRLFIVTLSKIFHLLQKAYVGQIVGVFFFSGSSSPKAEKRLNVMFNPR
        + CL+HNI+R IHI EDLSQNVQ PSE I GSFD+IK F+ QSDSEGD  HR RLFIV LSKIF LLQKAY GQIVGV  FSGSSSP AEK LNV+FNPR
Subjt:  VFCLLHNIRRVIHILEDLSQNVQGPSEFIIGSFDNIKTFKVQSDSEGDVYHRWRLFIVTLSKIFHLLQKAYVGQIVGVFFFSGSSSPKAEKRLNVMFNPR

Query:  LTPCWLVEEVKTNTTIQEVILVRTTLAWITGIILLIATLMG
         TP WLVEEVK NTTIQEVILVRTTLAWITGIILLIATLMG
Subjt:  LTPCWLVEEVKTNTTIQEVILVRTTLAWITGIILLIATLMG

XP_022949579.1 uncharacterized protein LOC111452887 [Cucurbita moschata]5.7e-5383.45Show/hide
Query:  CLLHNIRRVIHILEDLSQNVQGPSEFIIGSFDNIKTFKVQSDSEGDVYHRWRLFIVTLSKIFHLLQKAYVGQIVGVFFFSGSSSPKAEKRLNVMFNPRLT
        CL+HNIRR IHI EDLSQNVQ PSE I GSF++IK FK QSDSE D   R RLF VTL KIFHLLQKAY GQIVGV FFSGSSSPKAEK LNVMFNPR T
Subjt:  CLLHNIRRVIHILEDLSQNVQGPSEFIIGSFDNIKTFKVQSDSEGDVYHRWRLFIVTLSKIFHLLQKAYVGQIVGVFFFSGSSSPKAEKRLNVMFNPRLT

Query:  PCWLVEEVKTNTTIQEVILVRTTLAWITGIILLIATLMG
        P WLVEEVK NTTIQEVILVRTTLAWITGIILLIATLMG
Subjt:  PCWLVEEVKTNTTIQEVILVRTTLAWITGIILLIATLMG

XP_022974872.1 uncharacterized protein LOC111473645 [Cucurbita maxima]3.0e-5482.98Show/hide
Query:  VFCLLHNIRRVIHILEDLSQNVQGPSEFIIGSFDNIKTFKVQSDSEGDVYHRWRLFIVTLSKIFHLLQKAYVGQIVGVFFFSGSSSPKAEKRLNVMFNPR
        + CL+HNIRR IHI EDLSQNVQ PSE I GSF++IK FK QSDSEGD   R RLF VTLSKIFHLLQKAY G+IVGV FFSGSSSPKAEK LNVMFNPR
Subjt:  VFCLLHNIRRVIHILEDLSQNVQGPSEFIIGSFDNIKTFKVQSDSEGDVYHRWRLFIVTLSKIFHLLQKAYVGQIVGVFFFSGSSSPKAEKRLNVMFNPR

Query:  LTPCWLVEEVKTNTTIQEVILVRTTLAWITGIILLIATLMG
         TP WLVEEVK NTTIQEVILVRTTLAWITGIILLIATLMG
Subjt:  LTPCWLVEEVKTNTTIQEVILVRTTLAWITGIILLIATLMG

XP_023540910.1 uncharacterized protein LOC111801150 [Cucurbita pepo subsp. pepo]1.3e-5282.01Show/hide
Query:  CLLHNIRRVIHILEDLSQNVQGPSEFIIGSFDNIKTFKVQSDSEGDVYHRWRLFIVTLSKIFHLLQKAYVGQIVGVFFFSGSSSPKAEKRLNVMFNPRLT
        CL+HNI+R IHI EDLSQNVQ PSE I GSF++IK FK QSDSEGD   R RLF VTLSKIFHLLQKAY GQIVGV FFSGSSSPKAEK LNVMF PR T
Subjt:  CLLHNIRRVIHILEDLSQNVQGPSEFIIGSFDNIKTFKVQSDSEGDVYHRWRLFIVTLSKIFHLLQKAYVGQIVGVFFFSGSSSPKAEKRLNVMFNPRLT

Query:  PCWLVEEVKTNTTIQEVILVRTTLAWITGIILLIATLMG
        P WLVE+VK NT+IQEVILVRTTLAWITGIILLIATLMG
Subjt:  PCWLVEEVKTNTTIQEVILVRTTLAWITGIILLIATLMG

TrEMBL top hitse value%identityAlignment
A0A5D3D0P7 Type 1 membrane protein, putative isoform 11.9e-4977.54Show/hide
Query:  LLHNIRRVIHILEDLSQNVQGPSEFIIGSFDNIKTFKVQSDSEGDVYHRWRLFIVTLSKIFHLLQKAYVGQIVGVFFFSGSSSPKAEKRLNVMFNPRLTP
        L HNI+R +HI EDLSQNVQ PSE I GSF+ IK F+ +SDSEGD  HR RLF V LSKIFHLLQKAY GQIVGV +FSGSSSPKA K L VMF+PRLTP
Subjt:  LLHNIRRVIHILEDLSQNVQGPSEFIIGSFDNIKTFKVQSDSEGDVYHRWRLFIVTLSKIFHLLQKAYVGQIVGVFFFSGSSSPKAEKRLNVMFNPRLTP

Query:  CWLVEEVKTNTTIQEVILVRTTLAWITGIILLIATLMG
         WLVE+ K NTTI EVILVRTTLAWITGIILLIATLMG
Subjt:  CWLVEEVKTNTTIQEVILVRTTLAWITGIILLIATLMG

A0A6J1ED79 uncharacterized protein LOC1114321148.1e-5380.85Show/hide
Query:  VFCLLHNIRRVIHILEDLSQNVQGPSEFIIGSFDNIKTFKVQSDSEGDVYHRWRLFIVTLSKIFHLLQKAYVGQIVGVFFFSGSSSPKAEKRLNVMFNPR
        + CL+HNI+R IHI EDLSQNVQ PSE I GSFD+IK F+ QSDSEGD  HR RLFIV LSKIF LLQKAY GQIVGV  FSGSSSP AEK LNV+FNPR
Subjt:  VFCLLHNIRRVIHILEDLSQNVQGPSEFIIGSFDNIKTFKVQSDSEGDVYHRWRLFIVTLSKIFHLLQKAYVGQIVGVFFFSGSSSPKAEKRLNVMFNPR

Query:  LTPCWLVEEVKTNTTIQEVILVRTTLAWITGIILLIATLMG
         TP WLVEEVK NTTIQEVILVRTTLAWITGIILLIATLMG
Subjt:  LTPCWLVEEVKTNTTIQEVILVRTTLAWITGIILLIATLMG

A0A6J1GD87 uncharacterized protein LOC1114528872.8e-5383.45Show/hide
Query:  CLLHNIRRVIHILEDLSQNVQGPSEFIIGSFDNIKTFKVQSDSEGDVYHRWRLFIVTLSKIFHLLQKAYVGQIVGVFFFSGSSSPKAEKRLNVMFNPRLT
        CL+HNIRR IHI EDLSQNVQ PSE I GSF++IK FK QSDSE D   R RLF VTL KIFHLLQKAY GQIVGV FFSGSSSPKAEK LNVMFNPR T
Subjt:  CLLHNIRRVIHILEDLSQNVQGPSEFIIGSFDNIKTFKVQSDSEGDVYHRWRLFIVTLSKIFHLLQKAYVGQIVGVFFFSGSSSPKAEKRLNVMFNPRLT

Query:  PCWLVEEVKTNTTIQEVILVRTTLAWITGIILLIATLMG
        P WLVEEVK NTTIQEVILVRTTLAWITGIILLIATLMG
Subjt:  PCWLVEEVKTNTTIQEVILVRTTLAWITGIILLIATLMG

A0A6J1IBF9 uncharacterized protein LOC1114736451.5e-5482.98Show/hide
Query:  VFCLLHNIRRVIHILEDLSQNVQGPSEFIIGSFDNIKTFKVQSDSEGDVYHRWRLFIVTLSKIFHLLQKAYVGQIVGVFFFSGSSSPKAEKRLNVMFNPR
        + CL+HNIRR IHI EDLSQNVQ PSE I GSF++IK FK QSDSEGD   R RLF VTLSKIFHLLQKAY G+IVGV FFSGSSSPKAEK LNVMFNPR
Subjt:  VFCLLHNIRRVIHILEDLSQNVQGPSEFIIGSFDNIKTFKVQSDSEGDVYHRWRLFIVTLSKIFHLLQKAYVGQIVGVFFFSGSSSPKAEKRLNVMFNPR

Query:  LTPCWLVEEVKTNTTIQEVILVRTTLAWITGIILLIATLMG
         TP WLVEEVK NTTIQEVILVRTTLAWITGIILLIATLMG
Subjt:  LTPCWLVEEVKTNTTIQEVILVRTTLAWITGIILLIATLMG

A0A6J1IYZ3 uncharacterized protein LOC1114797292.0e-5179.43Show/hide
Query:  VFCLLHNIRRVIHILEDLSQNVQGPSEFIIGSFDNIKTFKVQSDSEGDVYHRWRLFIVTLSKIFHLLQKAYVGQIVGVFFFSGSSSPKAEKRLNVMFNPR
        + CL+HNI+R IHI EDLSQNVQ PSE I GSFD+IK F+ QSDSE D  HR RLFIV LSKIF LLQKAY GQIVGV  FSGSSSP A+K LNV+FNPR
Subjt:  VFCLLHNIRRVIHILEDLSQNVQGPSEFIIGSFDNIKTFKVQSDSEGDVYHRWRLFIVTLSKIFHLLQKAYVGQIVGVFFFSGSSSPKAEKRLNVMFNPR

Query:  LTPCWLVEEVKTNTTIQEVILVRTTLAWITGIILLIATLMG
         TP WLVEEVK NTTIQEVILVRTTLAWITGIILLIATLMG
Subjt:  LTPCWLVEEVKTNTTIQEVILVRTTLAWITGIILLIATLMG

SwissProt top hitse value%identityAlignment
O22860 60S ribosomal protein L383.1e-1784.31Show/hide
Query:  KQIHEIKDFFLTGRRKDARSFKIKRSKDVVKFKVCCSKYLYTLCVFDSENA
        KQIHEIKDF LT RRKDARS KIKRSKD+VKFKV CS+YLYTLCVFD E A
Subjt:  KQIHEIKDFFLTGRRKDARSFKIKRSKDVVKFKVCCSKYLYTLCVFDSENA

P46291 60S ribosomal protein L383.8e-1578.43Show/hide
Query:  KQIHEIKDFFLTGRRKDARSFKIKRSKDVVKFKVCCSKYLYTLCVFDSENA
        KQIHEIKDF LT RRKDAR+ KIK++KD+VKFKV CSKYLYTLCV D E A
Subjt:  KQIHEIKDFFLTGRRKDARSFKIKRSKDVVKFKVCCSKYLYTLCVFDSENA

P63173 60S ribosomal protein L381.5e-1166.67Show/hide
Query:  KQIHEIKDFFLTGRRKDARSFKIKRSKDVVKFKVCCSKYLYTLCVFDSENA
        ++I EIKDF LT RRKDA+S KIK++KD VKFKV CS+YLYTL + D E A
Subjt:  KQIHEIKDFFLTGRRKDARSFKIKRSKDVVKFKVCCSKYLYTLCVFDSENA

Q32PB9 60S ribosomal protein L381.5e-1166.67Show/hide
Query:  KQIHEIKDFFLTGRRKDARSFKIKRSKDVVKFKVCCSKYLYTLCVFDSENA
        ++I EIKDF LT RRKDA+S KIK++KD VKFKV CS+YLYTL + D E A
Subjt:  KQIHEIKDFFLTGRRKDARSFKIKRSKDVVKFKVCCSKYLYTLCVFDSENA

Q95V84 60S ribosomal protein L382.7e-1372.55Show/hide
Query:  KQIHEIKDFFLTGRRKDARSFKIKRSKDVVKFKVCCSKYLYTLCVFDSENA
        KQIHEIKDF LT RRKDA+S KIK++KD VKFKV CS+YLYTL + D E A
Subjt:  KQIHEIKDFFLTGRRKDARSFKIKRSKDVVKFKVCCSKYLYTLCVFDSENA

Arabidopsis top hitse value%identityAlignment
AT1G80000.1 CASC3/Barentsz eIF4AIII binding6.6e-0766.67Show/hide
Query:  RTHGGRRLWESKDDMKWGHDKFEEMTLQER
        R  GGRRLW+S+D+ KWGHDKFEEM  Q++
Subjt:  RTHGGRRLWESKDDMKWGHDKFEEMTLQER

AT1G80000.2 CASC3/Barentsz eIF4AIII binding6.6e-0766.67Show/hide
Query:  RTHGGRRLWESKDDMKWGHDKFEEMTLQER
        R  GGRRLW+S+D+ KWGHDKFEEM  Q++
Subjt:  RTHGGRRLWESKDDMKWGHDKFEEMTLQER

AT2G43460.1 Ribosomal L38e protein family2.2e-1884.31Show/hide
Query:  KQIHEIKDFFLTGRRKDARSFKIKRSKDVVKFKVCCSKYLYTLCVFDSENA
        KQIHEIKDF LT RRKDARS KIKRSKD+VKFKV CS+YLYTLCVFD E A
Subjt:  KQIHEIKDFFLTGRRKDARSFKIKRSKDVVKFKVCCSKYLYTLCVFDSENA

AT3G24160.1 putative type 1 membrane protein9.2e-1735.03Show/hide
Query:  EMTLQERWRTESSLVVFCLLHNIRRVIHILEDLSQNVQGPSEFIIGSFDNIKTFKVQSDSEGDVYHRWRLFIVTLSKIFHLLQKAYVGQIVGVFFFSGSS
        E  L++    + +L +  L  NIR+ + + +DLS  +   +E  +G F  I     Q   +G       + + TLSK+F+LL+ ++ GQIVGV       
Subjt:  EMTLQERWRTESSLVVFCLLHNIRRVIHILEDLSQNVQGPSEFIIGSFDNIKTFKVQSDSEGDVYHRWRLFIVTLSKIFHLLQKAYVGQIVGVFFFSGSS

Query:  SPKAEKRLNVMFNPRLTPCWL-VEEVKTNTTIQEVILVRTTLAWITGIILLIATLMG
        + ++E  LN   +       + VE + +   I EVILVR TLAW+TGIILLIAT++G
Subjt:  SPKAEKRLNVMFNPRLTPCWL-VEEVKTNTTIQEVILVRTTLAWITGIILLIATLMG

AT3G59540.1 Ribosomal L38e protein family2.2e-1884.31Show/hide
Query:  KQIHEIKDFFLTGRRKDARSFKIKRSKDVVKFKVCCSKYLYTLCVFDSENA
        KQIHEIKDF LT RRKDARS KIKRSKD+VKFKV CS+YLYTLCVFD E A
Subjt:  KQIHEIKDFFLTGRRKDARSFKIKRSKDVVKFKVCCSKYLYTLCVFDSENA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGGAACTCCCTTTTGTGGACAGACGAAGCAAATACATGAGATTAAAGACTTTTTTCTCACTGGAAGAAGAAAGGATGCTCGTTCTTTCAAAATTAAGAGGAGCAA
AGATGTAGTCAAGTTTAAGGTTTGTTGCTCTAAGTACCTTTACACGCTTTGTGTGTTTGACTCTGAGAATGCGTACTTCTTGTTTTTTCTGGCTATAAAATGGAGAACAC
ATGGTGGAAGGAGGTTGTGGGAGTCTAAGGATGACATGAAATGGGGGCATGACAAGTTTGAAGAAATGACTTTGCAAGAAAGATGGAGGACAGAGAGTTCATTGGTAGTT
TTTTGTCTCCTTCACAATATTAGAAGGGTTATACACATTCTAGAGGATTTGTCACAAAATGTGCAAGGTCCATCTGAGTTCATCATTGGCTCTTTCGATAACATCAAGAC
ATTCAAAGTTCAAAGTGATTCTGAAGGAGATGTTTATCATAGATGGAGACTATTTATTGTTACTTTGTCCAAGATATTCCACTTGCTCCAAAAAGCATATGTTGGTCAAA
TTGTTGGAGTTTTTTTCTTTTCTGGATCATCATCACCGAAGGCAGAAAAAAGATTAAATGTGATGTTTAACCCTCGGTTGACTCCATGTTGGTTAGTGGAAGAAGTCAAA
ACTAATACAACTATTCAAGAAGTGATATTGGTTAGGACAACCCTTGCCTGGATCACAGGAATCATCCTTTTGATTGCTACTCTTATGGGATGTGGTGCATTCTTTGGAAC
TGGTGTTGCATTCAACTTGTTAGATGTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGGAACTCCCTTTTGTGGACAGACGAAGCAAATACATGAGATTAAAGACTTTTTTCTCACTGGAAGAAGAAAGGATGCTCGTTCTTTCAAAATTAAGAGGAGCAA
AGATGTAGTCAAGTTTAAGGTTTGTTGCTCTAAGTACCTTTACACGCTTTGTGTGTTTGACTCTGAGAATGCGTACTTCTTGTTTTTTCTGGCTATAAAATGGAGAACAC
ATGGTGGAAGGAGGTTGTGGGAGTCTAAGGATGACATGAAATGGGGGCATGACAAGTTTGAAGAAATGACTTTGCAAGAAAGATGGAGGACAGAGAGTTCATTGGTAGTT
TTTTGTCTCCTTCACAATATTAGAAGGGTTATACACATTCTAGAGGATTTGTCACAAAATGTGCAAGGTCCATCTGAGTTCATCATTGGCTCTTTCGATAACATCAAGAC
ATTCAAAGTTCAAAGTGATTCTGAAGGAGATGTTTATCATAGATGGAGACTATTTATTGTTACTTTGTCCAAGATATTCCACTTGCTCCAAAAAGCATATGTTGGTCAAA
TTGTTGGAGTTTTTTTCTTTTCTGGATCATCATCACCGAAGGCAGAAAAAAGATTAAATGTGATGTTTAACCCTCGGTTGACTCCATGTTGGTTAGTGGAAGAAGTCAAA
ACTAATACAACTATTCAAGAAGTGATATTGGTTAGGACAACCCTTGCCTGGATCACAGGAATCATCCTTTTGATTGCTACTCTTATGGGATGTGGTGCATTCTTTGGAAC
TGGTGTTGCATTCAACTTGTTAGATGTATAG
Protein sequenceShow/hide protein sequence
MVGTPFCGQTKQIHEIKDFFLTGRRKDARSFKIKRSKDVVKFKVCCSKYLYTLCVFDSENAYFLFFLAIKWRTHGGRRLWESKDDMKWGHDKFEEMTLQERWRTESSLVV
FCLLHNIRRVIHILEDLSQNVQGPSEFIIGSFDNIKTFKVQSDSEGDVYHRWRLFIVTLSKIFHLLQKAYVGQIVGVFFFSGSSSPKAEKRLNVMFNPRLTPCWLVEEVK
TNTTIQEVILVRTTLAWITGIILLIATLMGCGAFFGTGVAFNLLDV