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Lag0031582 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031582
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDUF4283 domain-containing protein
Genome locationchr11:10358845..10359562
RNA-Seq ExpressionLag0031582
SyntenyLag0031582
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0004518 - nuclease activity (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5449841.1 hypothetical protein F2P56_030246 [Juglans regia]2.0e-1759.26Show/hide
Query:  VGRSGGLCLLWKDEVDVSIRSYSQYHIDASI-NWDNKLWRFSGIYGNPNASHRRHTWNLLRYLHNHDNSAWMVGGDFNATL
        VGRSGGL LLWK E+ VSI S+S+YHIDA I   D   WRF+G+YG+P+AS+R  TWNL+R L    +  W+VGGDFN  L
Subjt:  VGRSGGLCLLWKDEVDVSIRSYSQYHIDASI-NWDNKLWRFSGIYGNPNASHRRHTWNLLRYLHNHDNSAWMVGGDFNATL

KAF5477448.1 hypothetical protein F2P56_004088 [Juglans regia]5.3e-1854.32Show/hide
Query:  VGRSGGLCLLWKDEVDVSIRSYSQYHIDASINWDN-KLWRFSGIYGNPNASHRRHTWNLLRYLHNHDNSAWMVGGDFNATL
        VG SGGL LLW  E+ + ++SYS+YHID  +  D+ + WRF+GIYGNP AS+R  TWNL+R LH+ +   W++GGDFN  L
Subjt:  VGRSGGLCLLWKDEVDVSIRSYSQYHIDASINWDN-KLWRFSGIYGNPNASHRRHTWNLLRYLHNHDNSAWMVGGDFNATL

PRQ56718.1 putative RNA-directed DNA polymerase [Rosa chinensis]1.0e-1655.7Show/hide
Query:  VGRSGGLCLLWKDEVDVSIRSYSQYHIDASI--NWDNKLWRFSGIYGNPNASHRRHTWNLLRYLHNHDNSAWMVGGDFN
        V RSGGLCLLW D+  VS++SYS  HID  I    D + WRF+G+YG P A  R  TWNLL+ L  H N  W+VGGD+N
Subjt:  VGRSGGLCLLWKDEVDVSIRSYSQYHIDASI--NWDNKLWRFSGIYGNPNASHRRHTWNLLRYLHNHDNSAWMVGGDFN

TXG63522.1 hypothetical protein EZV62_010516 [Acer yangbiense]5.8e-1760Show/hide
Query:  GRSGGLCLLWKDEVDVSIRSYSQYHIDASINWDNKL-WRFSGIYGNPNASHRRHTWNLLRYLHNHDNSAWMVGGDFNATL
        GRSGGL LLWK+   V + SYS  HIDA I+ DN L WRFSGIYG+PN S+R +TW L+R L   DN  W+ GGDFN  L
Subjt:  GRSGGLCLLWKDEVDVSIRSYSQYHIDASINWDNKL-WRFSGIYGNPNASHRRHTWNLLRYLHNHDNSAWMVGGDFNATL

TXG69190.1 hypothetical protein EZV62_004125 [Acer yangbiense]2.9e-1655.84Show/hide
Query:  GRSGGLCLLWKDEVDVSIRSYSQYHIDASINWDN-KLWRFSGIYGNPNASHRRHTWNLLRYLHNHDNSAWMVGGDFN
        G SGGLCLLWK E+DV++ SYS++HID  +   N K+WR +G YG+PN + R H WNLLR L       W VGGDFN
Subjt:  GRSGGLCLLWKDEVDVSIRSYSQYHIDASINWDN-KLWRFSGIYGNPNASHRRHTWNLLRYLHNHDNSAWMVGGDFN

TrEMBL top hitse value%identityAlignment
A0A2N9G656 Reverse transcriptase domain-containing protein1.3e-1757.14Show/hide
Query:  GRSGGLCLLWKDEVDVSIRSYSQYHIDASI-NWDNKLWRFSGIYGNPNASHRRHTWNLLRYLHNHDNSAWMVGGDFN
        GR GGLCL W+DEV++SIRS+S  HIDA I N DN  WRF+G YG P+ +HR  +WNLLR L++  +  W+  GDFN
Subjt:  GRSGGLCLLWKDEVDVSIRSYSQYHIDASI-NWDNKLWRFSGIYGNPNASHRRHTWNLLRYLHNHDNSAWMVGGDFN

A0A2N9J7Z5 Reverse transcriptase domain-containing protein1.3e-1757.14Show/hide
Query:  GRSGGLCLLWKDEVDVSIRSYSQYHIDASI-NWDNKLWRFSGIYGNPNASHRRHTWNLLRYLHNHDNSAWMVGGDFN
        GR GGLCL W+DEV++SIRS+S  HIDA I N DN  WRF+G YG P+ +HR  +WNLLR L++  +  W+  GDFN
Subjt:  GRSGGLCLLWKDEVDVSIRSYSQYHIDASI-NWDNKLWRFSGIYGNPNASHRRHTWNLLRYLHNHDNSAWMVGGDFN

A0A2P6SDG4 Putative RNA-directed DNA polymerase4.8e-1755.7Show/hide
Query:  VGRSGGLCLLWKDEVDVSIRSYSQYHIDASI--NWDNKLWRFSGIYGNPNASHRRHTWNLLRYLHNHDNSAWMVGGDFN
        V RSGGLCLLW D+  VS++SYS  HID  I    D + WRF+G+YG P A  R  TWNLL+ L  H N  W+VGGD+N
Subjt:  VGRSGGLCLLWKDEVDVSIRSYSQYHIDASI--NWDNKLWRFSGIYGNPNASHRRHTWNLLRYLHNHDNSAWMVGGDFN

A0A5C7I4W9 RNase H domain-containing protein2.8e-1760Show/hide
Query:  GRSGGLCLLWKDEVDVSIRSYSQYHIDASINWDNKL-WRFSGIYGNPNASHRRHTWNLLRYLHNHDNSAWMVGGDFNATL
        GRSGGL LLWK+   V + SYS  HIDA I+ DN L WRFSGIYG+PN S+R +TW L+R L   DN  W+ GGDFN  L
Subjt:  GRSGGLCLLWKDEVDVSIRSYSQYHIDASINWDNKL-WRFSGIYGNPNASHRRHTWNLLRYLHNHDNSAWMVGGDFNATL

A0A5C7IIT4 Uncharacterized protein1.4e-1655.84Show/hide
Query:  GRSGGLCLLWKDEVDVSIRSYSQYHIDASINWDN-KLWRFSGIYGNPNASHRRHTWNLLRYLHNHDNSAWMVGGDFN
        G SGGLCLLWK E+DV++ SYS++HID  +   N K+WR +G YG+PN + R H WNLLR L       W VGGDFN
Subjt:  GRSGGLCLLWKDEVDVSIRSYSQYHIDASINWDN-KLWRFSGIYGNPNASHRRHTWNLLRYLHNHDNSAWMVGGDFN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGGACCAACATTTTCCTCAAGCCCACAACTAACTTTCATGAAGCTCCAGTCACGGCCACTTATTTACCTAAGATTGGCCCCTGCGGAAAAAGTTGGAAACGGAGA
GCCAGGCAATCCGGCACAACAGCTAGCTCCGGGGATGGCACATACAATCAGAAAAAACGAGGAGGAGAGGGGACAGTTAGCGGATCTCTTAAACGCGCACGAACCGAGGA
GGATGATCCTCCAAATTTTCCTGTACCAGTGGTGGAGGCTGTTGAACAGCCCCGCCGAGAACCATGAAAACTCTTATGTTGGTCGTAGTGGAGGTCTATGCTTGCTTTGG
AAAGACGAGGTTGATGTGTCTATCCGTTCATATTCACAATATCATATTGATGCTTCGATTAACTGGGATAATAAGTTGTGGCGTTTCTCCGGAATATATGGTAATCCGAA
TGCTAGCCATAGACGACATACATGGAATTTACTTCGATACTTGCATAATCATGATAATTCTGCGTGGATGGTGGGAGGCGATTTTAATGCAACCTTGCTATAG
mRNA sequenceShow/hide mRNA sequence
ATGACTGGACCAACATTTTCCTCAAGCCCACAACTAACTTTCATGAAGCTCCAGTCACGGCCACTTATTTACCTAAGATTGGCCCCTGCGGAAAAAGTTGGAAACGGAGA
GCCAGGCAATCCGGCACAACAGCTAGCTCCGGGGATGGCACATACAATCAGAAAAAACGAGGAGGAGAGGGGACAGTTAGCGGATCTCTTAAACGCGCACGAACCGAGGA
GGATGATCCTCCAAATTTTCCTGTACCAGTGGTGGAGGCTGTTGAACAGCCCCGCCGAGAACCATGAAAACTCTTATGTTGGTCGTAGTGGAGGTCTATGCTTGCTTTGG
AAAGACGAGGTTGATGTGTCTATCCGTTCATATTCACAATATCATATTGATGCTTCGATTAACTGGGATAATAAGTTGTGGCGTTTCTCCGGAATATATGGTAATCCGAA
TGCTAGCCATAGACGACATACATGGAATTTACTTCGATACTTGCATAATCATGATAATTCTGCGTGGATGGTGGGAGGCGATTTTAATGCAACCTTGCTATAG
Protein sequenceShow/hide protein sequence
MTGPTFSSSPQLTFMKLQSRPLIYLRLAPAEKVGNGEPGNPAQQLAPGMAHTIRKNEEERGQLADLLNAHEPRRMILQIFLYQWWRLLNSPAENHENSYVGRSGGLCLLW
KDEVDVSIRSYSQYHIDASINWDNKLWRFSGIYGNPNASHRRHTWNLLRYLHNHDNSAWMVGGDFNATLL