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Lag0031589 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031589
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr11:10428724..10431855
RNA-Seq ExpressionLag0031589
SyntenyLag0031589
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_010687479.1 PREDICTED: uncharacterized protein LOC104901585 [Beta vulgaris subsp. vulgaris]5.3e-1534.78Show/hide
Query:  FANGETGGGCVLRNADGEVLMVACLALQRCWSVDLVEDWALYKGVQLARQMRFSEFVVETDSLRLVKILHGDLHDVLKVGLLMDDICRLLHPCDSGKVLF
        FA+ + G G V+R+  G+VL   C  ++    VD+ E     +G+Q+A +  F   V+E D+L+L   L  +  +    G ++ DI RL+H C S     
Subjt:  FANGETGGGCVLRNADGEVLMVACLALQRCWSVDLVEDWALYKGVQLARQMRFSEFVVETDSLRLVKILHGDLHDVLKVGLLMDDICRLLHPCDSGKVLF

Query:  TPRQGNKVAHVLASLAFSFVDY-VWLEEWPSEVSNVIL
        T R+GN+VAH LA +  S     VWLEE P E++ +++
Subjt:  TPRQGNKVAHVLASLAFSFVDY-VWLEEWPSEVSNVIL

XP_021716820.1 uncharacterized protein LOC110684687 [Chenopodium quinoa]9.1e-1535.86Show/hide
Query:  IRSNCA-FANGETGGGCVLRNADGEVLMVACLALQRCWSVDLVEDWALYKGVQLARQMRFSEFVVETDSLRLVKILHGDLHDVLKVGLLMDDICRLLHPC
        I S+ A F N   G G V+R+A GEV++  CL L+  + VD+ E  AL   +++A +  F +  +ETD +++   L         +G++++DI +L   C
Subjt:  IRSNCA-FANGETGGGCVLRNADGEVLMVACLALQRCWSVDLVEDWALYKGVQLARQMRFSEFVVETDSLRLVKILHGDLHDVLKVGLLMDDICRLLHPC

Query:  DSGKVLFTPRQGNKVAHVLASLAFSFVDY-VWLEEWPSEVSNVIL
         S    F  R GN  AH LA L+ S+ D  VW+EE PSE+S  ++
Subjt:  DSGKVLFTPRQGNKVAHVLASLAFSFVDY-VWLEEWPSEVSNVIL

XP_021747455.1 uncharacterized protein LOC110713305 [Chenopodium quinoa]9.1e-1533.56Show/hide
Query:  IRSNCAFANGETGGGCVLRNADGEVLMVACLALQRCWSVDLVEDWALYKGVQLARQMRFSEFVVETDSLRLVKILHGDLHDVLKVGLLMDDICRLLHPCD
        + ++ AF     G G ++R+A+G+VL+  C   + C SVD+ E   +   +++A +  F +F++E D+L+L   +   +      G ++ DI +L   C 
Subjt:  IRSNCAFANGETGGGCVLRNADGEVLMVACLALQRCWSVDLVEDWALYKGVQLARQMRFSEFVVETDSLRLVKILHGDLHDVLKVGLLMDDICRLLHPCD

Query:  SGKVLFTPRQGNKVAHVLASLAFSFVDY-VWLEEWPSEVSNVILNYLDA
        S    F  R  N VAH LA L+F+F +Y VWLE  PSE+  ++ N LD+
Subjt:  SGKVLFTPRQGNKVAHVLASLAFSFVDY-VWLEEWPSEVSNVILNYLDA

XP_021750224.1 uncharacterized protein LOC110715912 [Chenopodium quinoa]1.1e-1539.71Show/hide
Query:  GGGCVLRNADGEVLMVACLALQRCWSVDLVEDWALYKGVQLARQMRFSEFVVETDSLRLVKILHGDLHDVLKVGLLMDDICRLLHPCDSGKVLFTPRQGN
        G G VLR+ADG VLM  C  L+  + VDL E  A+ + + +A ++ F  F++ETD+++L   +   +      G ++ DI RL+  C S    F  R GN
Subjt:  GGGCVLRNADGEVLMVACLALQRCWSVDLVEDWALYKGVQLARQMRFSEFVVETDSLRLVKILHGDLHDVLKVGLLMDDICRLLHPCDSGKVLFTPRQGN

Query:  KVAHVLASLAFSFVDY-VWLEEWPSEVSNVILNYLD
         VAH LA+L+ +F +Y  WLEE+PSE+   + N LD
Subjt:  KVAHVLASLAFSFVDY-VWLEEWPSEVSNVILNYLD

XP_022150944.1 uncharacterized protein LOC111018973 [Momordica charantia]2.6e-1439.39Show/hide
Query:  GGGCVLRNADGEVLMVACLALQRCWSVDLVEDWALYKGVQLARQMRFSEFVVETDSLRLVKILHGDLHDVLKVGLLMDDICRLLHP-CDSGKVLFTPRQG
        G G ++R++ G V + A   L R   VD VE +A+Y+G+ LA +  F  F +ETDSLR+  +L  D  D  +VG+L   I   L    +     FT R G
Subjt:  GGGCVLRNADGEVLMVACLALQRCWSVDLVEDWALYKGVQLARQMRFSEFVVETDSLRLVKILHGDLHDVLKVGLLMDDICRLLHP-CDSGKVLFTPRQG

Query:  NKVAHVLASLAFSFVD-YVWLEEWPSEVSNVI
        N  AH+LA LA +     +W+EEWP E+S+V+
Subjt:  NKVAHVLASLAFSFVD-YVWLEEWPSEVSNVI

TrEMBL top hitse value%identityAlignment
A0A2I4GJL1 uncharacterized protein LOC1090084477.0e-1330.83Show/hide
Query:  GGGCVLRNADGEVLMVACLALQRCWSVDLVEDWALYKGVQLARQMRFSEFVVETDSLRLVKILHGDLHDVLKVGLLMDDICRLLHPCDSGKVLFTPRQGN
        G G V+R+ +GEVL+  C   +      L E WAL+K +++  ++  S+ + E D+  ++  ++ D+ D   +G +++DI +         V F PR GN
Subjt:  GGGCVLRNADGEVLMVACLALQRCWSVDLVEDWALYKGVQLARQMRFSEFVVETDSLRLVKILHGDLHDVLKVGLLMDDICRLLHPCDSGKVLFTPRQGN

Query:  KVAHVLASLAFSF-VDYVWLEEWPSEVSNVILN
        +VAH+LA  A     + +W+EE P  + N +L+
Subjt:  KVAHVLASLAFSF-VDYVWLEEWPSEVSNVILN

A0A6J1DBJ7 uncharacterized protein LOC1110189731.3e-1439.39Show/hide
Query:  GGGCVLRNADGEVLMVACLALQRCWSVDLVEDWALYKGVQLARQMRFSEFVVETDSLRLVKILHGDLHDVLKVGLLMDDICRLLHP-CDSGKVLFTPRQG
        G G ++R++ G V + A   L R   VD VE +A+Y+G+ LA +  F  F +ETDSLR+  +L  D  D  +VG+L   I   L    +     FT R G
Subjt:  GGGCVLRNADGEVLMVACLALQRCWSVDLVEDWALYKGVQLARQMRFSEFVVETDSLRLVKILHGDLHDVLKVGLLMDDICRLLHP-CDSGKVLFTPRQG

Query:  NKVAHVLASLAFSFVD-YVWLEEWPSEVSNVI
        N  AH+LA LA +     +W+EEWP E+S+V+
Subjt:  NKVAHVLASLAFSFVD-YVWLEEWPSEVSNVI

A0A6P9ECB2 uncharacterized protein LOC1183481591.3e-1130.83Show/hide
Query:  GGGCVLRNADGEVLMVACLALQRCWSVDLVEDWALYKGVQLARQMRFSEFVVETDSLRLVKILHGDLHDVLKVGLLMDDICRLLHPCDSGKVLFTPRQGN
        G G V+R+ +GEVL+  C   +      L E WAL+K +++  ++  S+ + E D   ++  ++ D  D   +G +++DI ++        V F PR GN
Subjt:  GGGCVLRNADGEVLMVACLALQRCWSVDLVEDWALYKGVQLARQMRFSEFVVETDSLRLVKILHGDLHDVLKVGLLMDDICRLLHPCDSGKVLFTPRQGN

Query:  KVAHVLASLAFSFVD-YVWLEEWPSEVSNVILN
        +VAH+LA  A    +  +W+EE P  + N +L+
Subjt:  KVAHVLASLAFSFVD-YVWLEEWPSEVSNVILN

A0A803LHG6 Uncharacterized protein2.8e-1435.17Show/hide
Query:  IRSNCA-FANGETGGGCVLRNADGEVLMVACLALQRCWSVDLVEDWALYKGVQLARQMRFSEFVVETDSLRLVKILHGDLHDVLKVGLLMDDICRLLHPC
        + SN A F     G G V+R+  G+V+   CL +   + VD+VE  A+   +++A +  F    +ETD+L+L   L    +D    G+++ DI  L   C
Subjt:  IRSNCA-FANGETGGGCVLRNADGEVLMVACLALQRCWSVDLVEDWALYKGVQLARQMRFSEFVVETDSLRLVKILHGDLHDVLKVGLLMDDICRLLHPC

Query:  DSGKVLFTPRQGNKVAHVLASLAFSFVDY-VWLEEWPSEVSNVIL
         S    F  R+GNKVAH LA L+ +F    VWLEE+PS +  +++
Subjt:  DSGKVLFTPRQGNKVAHVLASLAFSFVDY-VWLEEWPSEVSNVIL

A0A803MB59 Uncharacterized protein1.0e-1133.79Show/hide
Query:  IRSNCAFANGETGG-GCVLRNADGEVLMVACLALQRCWSVDLVEDWALYKGVQLARQMRFSEFVVETDSLRLVKILHGDLHDVLKVGLLMDDICRLLHPC
        I S+ A     T G G ++R+  G+V+   CL L+  + VD+ E  AL   + ++  + F +  +ETD L+L   L         +G++++DI +L   C
Subjt:  IRSNCAFANGETGG-GCVLRNADGEVLMVACLALQRCWSVDLVEDWALYKGVQLARQMRFSEFVVETDSLRLVKILHGDLHDVLKVGLLMDDICRLLHPC

Query:  DSGKVLFTPRQGNKVAHVLASLAFSFVDY-VWLEEWPSEVSNVIL
         S    F  R GN VAH LA L+ SFV+  V +EE PS +S+ ++
Subjt:  DSGKVLFTPRQGNKVAHVLASLAFSFVDY-VWLEEWPSEVSNVIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.5e-1036.36Show/hide
Query:  NGETGGGCVLRNADGEVLMVACLALQRCWSVDLVEDWALYKGVQLARQMRFSEFVVETDSLRLVKILHG-DLHDVLKVGLLMDDICRLLHPCDSGKVLFT
        N   G G +LRN  G VL +   AL R  +V   E  AL   V    +  +   + E+D+  LV +L+  D    L+  L  +DI +LLH  +  K  FT
Subjt:  NGETGGGCVLRNADGEVLMVACLALQRCWSVDLVEDWALYKGVQLARQMRFSEFVVETDSLRLVKILHG-DLHDVLKVGLLMDDICRLLHPCDSGKVLFT

Query:  PRQGNKVAHVLASLAFSFVDY
        PR GNKVA  +A  + SF +Y
Subjt:  PRQGNKVAHVLASLAFSFVDY

AT4G29090.1 Ribonuclease H-like superfamily protein3.9e-0833.88Show/hide
Query:  NGETGGGCVLRNADGEVLMVACLALQRCWSVDLVEDWALYKGVQLARQMRFSEFVVETDSLRLVKILHGD-LHDVLKVGLLMDDICRLLHPCDSGKVLFT
        N   G G VLRN  GEV  +   AL +  SV   E  A+   V    + +++  + E+DS  L++IL+ D +   LK    + D+ RLL      K +F 
Subjt:  NGETGGGCVLRNADGEVLMVACLALQRCWSVDLVEDWALYKGVQLARQMRFSEFVVETDSLRLVKILHGD-LHDVLKVGLLMDDICRLLHPCDSGKVLFT

Query:  PRQGNKVAHVLASLAFSFVDY
        PR+GN +A  +A  + SF++Y
Subjt:  PRQGNKVAHVLASLAFSFVDY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATTAACTGTGATACGGTCCAATTGTGCTTTCGCTAACGGTGAAACTGGTGGTGGTTGTGTGTTGCGCAATGCTGACGGTGAGGTCCTTATGGTGGCCTGTTTGGC
TCTGCAACGGTGTTGGAGTGTGGATTTGGTTGAGGATTGGGCTTTGTATAAAGGGGTCCAACTTGCTCGACAGATGAGGTTTTCAGAATTTGTGGTAGAGACTGATTCTT
TGAGGTTGGTCAAAATTCTTCATGGTGATCTACATGATGTTTTGAAAGTGGGGTTGTTGATGGATGATATTTGTAGGCTTCTCCATCCTTGTGATAGTGGTAAGGTTCTG
TTTACACCACGCCAGGGAAACAAAGTGGCACATGTTCTAGCTAGTTTGGCATTTTCTTTTGTTGATTATGTTTGGCTTGAAGAGTGGCCTAGTGAAGTCTCTAATGTAAT
TTTGAACTACCTCGACGCACAAGGAGCTGACAAGGACAACCGAGCAGAAATCAGACCAGAAGATAGACCCAAGAGGCAAAACCGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAATTAACTGTGATACGGTCCAATTGTGCTTTCGCTAACGGTGAAACTGGTGGTGGTTGTGTGTTGCGCAATGCTGACGGTGAGGTCCTTATGGTGGCCTGTTTGGC
TCTGCAACGGTGTTGGAGTGTGGATTTGGTTGAGGATTGGGCTTTGTATAAAGGGGTCCAACTTGCTCGACAGATGAGGTTTTCAGAATTTGTGGTAGAGACTGATTCTT
TGAGGTTGGTCAAAATTCTTCATGGTGATCTACATGATGTTTTGAAAGTGGGGTTGTTGATGGATGATATTTGTAGGCTTCTCCATCCTTGTGATAGTGGTAAGGTTCTG
TTTACACCACGCCAGGGAAACAAAGTGGCACATGTTCTAGCTAGTTTGGCATTTTCTTTTGTTGATTATGTTTGGCTTGAAGAGTGGCCTAGTGAAGTCTCTAATGTAAT
TTTGAACTACCTCGACGCACAAGGAGCTGACAAGGACAACCGAGCAGAAATCAGACCAGAAGATAGACCCAAGAGGCAAAACCGGTGA
Protein sequenceShow/hide protein sequence
MQLTVIRSNCAFANGETGGGCVLRNADGEVLMVACLALQRCWSVDLVEDWALYKGVQLARQMRFSEFVVETDSLRLVKILHGDLHDVLKVGLLMDDICRLLHPCDSGKVL
FTPRQGNKVAHVLASLAFSFVDYVWLEEWPSEVSNVILNYLDAQGADKDNRAEIRPEDRPKRQNR