; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0031633 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031633
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr11:11089662..11094912
RNA-Seq ExpressionLag0031633
SyntenyLag0031633
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036008.1 Retrotransposon gag protein [Cucumis melo var. makuwa]8.6e-1960.64Show/hide
Query:  MSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFYRLKVTSDQPKRKMDNLEVKLFNEVNSDKKLQSSIPSCMKRKFFVLINTEGSL
        +SMA  EEENQC +ST+ R SAF+RLS+STSKK +PSTS F RLK+T+DQ +R+M + + K F+E N D K+ S +PS MKRK  V INTEGSL
Subjt:  MSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFYRLKVTSDQPKRKMDNLEVKLFNEVNSDKKLQSSIPSCMKRKFFVLINTEGSL

KAA0044978.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.8e-1961.7Show/hide
Query:  MSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFYRLKVTSDQPKRKMDNLEVKLFNEVNSDKKLQSSIPSCMKRKFFVLINTEGSL
        +SMA  EEENQC  ST+ R SAF+RLS+STSKK +PSTS F RLK+T+DQ +R+M +L+ K F+E N D K+ S +PS MKRK  V INTEGSL
Subjt:  MSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFYRLKVTSDQPKRKMDNLEVKLFNEVNSDKKLQSSIPSCMKRKFFVLINTEGSL

KAA0050734.1 gag protease polyprotein [Cucumis melo var. makuwa]3.8e-1961.7Show/hide
Query:  MSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFYRLKVTSDQPKRKMDNLEVKLFNEVNSDKKLQSSIPSCMKRKFFVLINTEGSL
        +SMA  EEENQC  ST+ R SAF+RLS+STSKK +PSTS F RLK+T+DQ +R+M +L+ K F+E N D K+ S +PS MKRK  V INTEGSL
Subjt:  MSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFYRLKVTSDQPKRKMDNLEVKLFNEVNSDKKLQSSIPSCMKRKFFVLINTEGSL

TYK00108.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.1e-1860.64Show/hide
Query:  MSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFYRLKVTSDQPKRKMDNLEVKLFNEVNSDKKLQSSIPSCMKRKFFVLINTEGSL
        +SMA  EE+NQC  ST TR SAF+RLS+STSKK +PSTS F R+K+ +DQ +R+M +L+ K F+E N D K+ S +PS MKRK FV INTEGSL
Subjt:  MSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFYRLKVTSDQPKRKMDNLEVKLFNEVNSDKKLQSSIPSCMKRKFFVLINTEGSL

TYK16519.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.1e-1860.64Show/hide
Query:  MSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFYRLKVTSDQPKRKMDNLEVKLFNEVNSDKKLQSSIPSCMKRKFFVLINTEGSL
        +SMA  EEENQC  ST+ R SAF+RLS+STSKK +PSTS F RLK+T++Q KR+M + + K F+E N D K+ S +PS MKRK  V INTEGSL
Subjt:  MSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFYRLKVTSDQPKRKMDNLEVKLFNEVNSDKKLQSSIPSCMKRKFFVLINTEGSL

TrEMBL top hitse value%identityAlignment
A0A5A7SZJ7 Retrotransposon gag protein4.1e-1960.64Show/hide
Query:  MSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFYRLKVTSDQPKRKMDNLEVKLFNEVNSDKKLQSSIPSCMKRKFFVLINTEGSL
        +SMA  EEENQC +ST+ R SAF+RLS+STSKK +PSTS F RLK+T+DQ +R+M + + K F+E N D K+ S +PS MKRK  V INTEGSL
Subjt:  MSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFYRLKVTSDQPKRKMDNLEVKLFNEVNSDKKLQSSIPSCMKRKFFVLINTEGSL

A0A5A7TQ06 Retrotransposon gag protein1.9e-1961.7Show/hide
Query:  MSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFYRLKVTSDQPKRKMDNLEVKLFNEVNSDKKLQSSIPSCMKRKFFVLINTEGSL
        +SMA  EEENQC  ST+ R SAF+RLS+STSKK +PSTS F RLK+T+DQ +R+M +L+ K F+E N D K+ S +PS MKRK  V INTEGSL
Subjt:  MSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFYRLKVTSDQPKRKMDNLEVKLFNEVNSDKKLQSSIPSCMKRKFFVLINTEGSL

A0A5D3BBF9 Gag protease polyprotein1.9e-1961.7Show/hide
Query:  MSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFYRLKVTSDQPKRKMDNLEVKLFNEVNSDKKLQSSIPSCMKRKFFVLINTEGSL
        +SMA  EEENQC  ST+ R SAF+RLS+STSKK +PSTS F RLK+T+DQ +R+M +L+ K F+E N D K+ S +PS MKRK  V INTEGSL
Subjt:  MSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFYRLKVTSDQPKRKMDNLEVKLFNEVNSDKKLQSSIPSCMKRKFFVLINTEGSL

A0A5D3BLW3 Retrotransposon gag protein5.4e-1960.64Show/hide
Query:  MSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFYRLKVTSDQPKRKMDNLEVKLFNEVNSDKKLQSSIPSCMKRKFFVLINTEGSL
        +SMA  EE+NQC  ST TR SAF+RLS+STSKK +PSTS F R+K+ +DQ +R+M +L+ K F+E N D K+ S +PS MKRK FV INTEGSL
Subjt:  MSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFYRLKVTSDQPKRKMDNLEVKLFNEVNSDKKLQSSIPSCMKRKFFVLINTEGSL

A0A5D3D209 Retrotransposon gag protein5.4e-1960.64Show/hide
Query:  MSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFYRLKVTSDQPKRKMDNLEVKLFNEVNSDKKLQSSIPSCMKRKFFVLINTEGSL
        +SMA  EEENQC  ST+ R SAF+RLS+STSKK +PSTS F RLK+T++Q KR+M + + K F+E N D K+ S +PS MKRK  V INTEGSL
Subjt:  MSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFYRLKVTSDQPKRKMDNLEVKLFNEVNSDKKLQSSIPSCMKRKFFVLINTEGSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTATGGCCGCGACAGAAGAAGAAAATCAATGTTCGGTGTCCACCTTCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCAACCTTC
GACATCTGTTTTTTATCGCCTCAAAGTAACAAGTGATCAACCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTCAATGAAGTAAACAGCGACAAGAAGCTTCAAA
GTAGCATCCCGTCATGTATGAAGAGGAAGTTCTTTGTTCTCATAAATACAGAAGGTTCCTTGAAGAAGATTTCATTCCTCCAAATTCAATGCCTCGCTAGTCTCAAGTTC
GGTGATTCACTCACCCTAAGTTCGTGCATTCCTTCTTTCAAGTTTGAAGGTTCTCACGTGTTTCGCTGCAGTTCCTTTTCTCCAAGTACGAAGGTGCTCCTTCTCCAAGT
TCGAAGGCTCTTACATTGCTGCGATGCAGTTCCTTCTCTCCAAGTTCAAAGGTTCTCACGTGTTCTGCTACAGTTCCTTCTCTCCAAGTACGAAGGTTCTCTCCTCGAAG
TCGAAGGTTCTCACGTTGCTTCACTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCTCACGTTGCTTCGCCGTAGTTCCTTCTCTCCAAGTTCGAAGGTTCTCTCCTCCAAG
TCGAAGGTTCTCTCACGTTGCTTCGCTGCAGTTCCTTCCTACAAGTTTGAAGGTTTTCATGCGCTTTGCTGCAGTTCCTTCTCTCCAAGTTCAAAGGTTCTCACGCATTT
CGCTACAGTTCATTTCCTCCAAGTTCAAAGGTTCTCACGTGCTTCGGTGAAGTTCCTTCCTCCAAGTCTGAAGGTTCTCACGTGCTTCGGTGAAGTTCCTTCCTCCCAAG
TTCGAAGGTTCTTACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCTCTTCGCTGCGCAGTTCCTTCCTCCAAGT
TCGAAGGTTCTCATGCGCTTCGCTGCTACCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCGCTCCGTTGC
TACTTCTCCAAGTTTGAAGGTGCTTCTCTCCACTACTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCTACTGCTCCTTCTCCAAGTTCGAAGGTGCTTCTCTCCACCCCTC
ATTTTGAAGGTTCGCCACTGAGGTTCTCCTTCTCCAAGTTCGAAGGTTCACCGTTGCTCCTTTTCAAATGTTTGGCGGCGGTTGACGGCCTCATTCCACTCCATCTCAAA
TGTTGGCAGTTGACGGCGTCCGCTGCTCTTCATCTTCAAATGTTGGCAGTTGACGGCGTCCGCTTCGCTTCATCTTCAAAAATTGACTGTGACGAAGTCACTGCAAGTGA
ATCTGATGAGGACCGTTGTAGGCGAGTCGAGTCTGGTGACCACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCACTGTAGGC
AAATCTGGAGTGCATCACTGAAGGCGAATCTGGTGACTACCCCTGCAGGCAAATCTGGTGACTACCCCTGCAGGTTACTTAGATCACCAGATAAAATGGGGACTGGTCTA
GAGTGCGTCACTGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGAGTGCATCACTGAAGGCAAATCTGG
TGACTACCCCGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGAGTGCATCACTGTAGGCAAATCTGGTGACTACTCCTGCAGGTTACTCAGATCACCCAATAAAA
TGGGGACTGGTCTAGTAGGAATGCATCACTGTAGGCAAATCTGGACATCAACACTTCTTGAAGACCAAACGCTCTTCAAGACCTCAACACTCCTTGAAGATCAAAACTCT
TCAGGACATCAACATTTCTTGAAGACCAAACACTCTTCAAGACTTCAACACTCCTTGAAGATCAAAGACTCTTCAGGACATCAACACTTCTTGAAGACTCCTTCAAGACT
AGAAGATCTCAAGCTCCAAGAATCCATTGAAGCTTCAGACTCAGGATCGAGCGTTCCGGCCCTCGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTATGGCCGCGACAGAAGAAGAAAATCAATGTTCGGTGTCCACCTTCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCAACCTTC
GACATCTGTTTTTTATCGCCTCAAAGTAACAAGTGATCAACCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTCAATGAAGTAAACAGCGACAAGAAGCTTCAAA
GTAGCATCCCGTCATGTATGAAGAGGAAGTTCTTTGTTCTCATAAATACAGAAGGTTCCTTGAAGAAGATTTCATTCCTCCAAATTCAATGCCTCGCTAGTCTCAAGTTC
GGTGATTCACTCACCCTAAGTTCGTGCATTCCTTCTTTCAAGTTTGAAGGTTCTCACGTGTTTCGCTGCAGTTCCTTTTCTCCAAGTACGAAGGTGCTCCTTCTCCAAGT
TCGAAGGCTCTTACATTGCTGCGATGCAGTTCCTTCTCTCCAAGTTCAAAGGTTCTCACGTGTTCTGCTACAGTTCCTTCTCTCCAAGTACGAAGGTTCTCTCCTCGAAG
TCGAAGGTTCTCACGTTGCTTCACTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCTCACGTTGCTTCGCCGTAGTTCCTTCTCTCCAAGTTCGAAGGTTCTCTCCTCCAAG
TCGAAGGTTCTCTCACGTTGCTTCGCTGCAGTTCCTTCCTACAAGTTTGAAGGTTTTCATGCGCTTTGCTGCAGTTCCTTCTCTCCAAGTTCAAAGGTTCTCACGCATTT
CGCTACAGTTCATTTCCTCCAAGTTCAAAGGTTCTCACGTGCTTCGGTGAAGTTCCTTCCTCCAAGTCTGAAGGTTCTCACGTGCTTCGGTGAAGTTCCTTCCTCCCAAG
TTCGAAGGTTCTTACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCTCTTCGCTGCGCAGTTCCTTCCTCCAAGT
TCGAAGGTTCTCATGCGCTTCGCTGCTACCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCGCTCCGTTGC
TACTTCTCCAAGTTTGAAGGTGCTTCTCTCCACTACTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCTACTGCTCCTTCTCCAAGTTCGAAGGTGCTTCTCTCCACCCCTC
ATTTTGAAGGTTCGCCACTGAGGTTCTCCTTCTCCAAGTTCGAAGGTTCACCGTTGCTCCTTTTCAAATGTTTGGCGGCGGTTGACGGCCTCATTCCACTCCATCTCAAA
TGTTGGCAGTTGACGGCGTCCGCTGCTCTTCATCTTCAAATGTTGGCAGTTGACGGCGTCCGCTTCGCTTCATCTTCAAAAATTGACTGTGACGAAGTCACTGCAAGTGA
ATCTGATGAGGACCGTTGTAGGCGAGTCGAGTCTGGTGACCACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCACTGTAGGC
AAATCTGGAGTGCATCACTGAAGGCGAATCTGGTGACTACCCCTGCAGGCAAATCTGGTGACTACCCCTGCAGGTTACTTAGATCACCAGATAAAATGGGGACTGGTCTA
GAGTGCGTCACTGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGAGTGCATCACTGAAGGCAAATCTGG
TGACTACCCCGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGAGTGCATCACTGTAGGCAAATCTGGTGACTACTCCTGCAGGTTACTCAGATCACCCAATAAAA
TGGGGACTGGTCTAGTAGGAATGCATCACTGTAGGCAAATCTGGACATCAACACTTCTTGAAGACCAAACGCTCTTCAAGACCTCAACACTCCTTGAAGATCAAAACTCT
TCAGGACATCAACATTTCTTGAAGACCAAACACTCTTCAAGACTTCAACACTCCTTGAAGATCAAAGACTCTTCAGGACATCAACACTTCTTGAAGACTCCTTCAAGACT
AGAAGATCTCAAGCTCCAAGAATCCATTGAAGCTTCAGACTCAGGATCGAGCGTTCCGGCCCTCGAGTGA
Protein sequenceShow/hide protein sequence
MSMAATEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFYRLKVTSDQPKRKMDNLEVKLFNEVNSDKKLQSSIPSCMKRKFFVLINTEGSLKKISFLQIQCLASLKF
GDSLTLSSCIPSFKFEGSHVFRCSSFSPSTKVLLLQVRRLLHCCDAVPSLQVQRFSRVLLQFLLSKYEGSLLEVEGSHVASLQLLPPSSKVLTLLRRSSFSPSSKVLSSK
SKVLSRCFAAVPSYKFEGFHALCCSSFSPSSKVLTHFATVHFLQVQRFSRASVKFLPPSLKVLTCFGEVPSSQVRRFLRASLQFLPPSSKFLPPSSKVLMLFAAQFLPPS
SKVLMRFAATFLQVRRFPHALLSTAPSPSSKALRSVATSPSLKVLLSTTPSPSSKALLSTAPSPSSKVLLSTPHFEGSPLRFSFSKFEGSPLLLFKCLAAVDGLIPLHLK
CWQLTASAALHLQMLAVDGVRFASSSKIDCDEVTASESDEDRCRRVESGDHPCRLLRSPNKMGTGLAGVHHCRQIWSASLKANLVTTPAGKSGDYPCRLLRSPDKMGTGL
ECVTEGESGDYPCRLLRSPNKMGTGLAGECITEGKSGDYPAGYSDHPIKWGLECITVGKSGDYSCRLLRSPNKMGTGLVGMHHCRQIWTSTLLEDQTLFKTSTLLEDQNS
SGHQHFLKTKHSSRLQHSLKIKDSSGHQHFLKTPSRLEDLKLQESIEASDSGSSVPALE