; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0031642 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031642
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationchr11:11305377..11306612
RNA-Seq ExpressionLag0031642
SyntenyLag0031642
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN69951.1 hypothetical protein VITISV_005401 [Vitis vinifera]3.8e-2333.67Show/hide
Query:  VYGPNSYKERKSFWLELYDLQALCLPNWIVGVTSTSLDGLGKNLQTLPPPVMVD--SWWSSNSIQGWAGHGFIQNLKGLKNELKIWNQQNHSKQRDRQMS
        VYG N    RK FWLEL DL  L  P W +                L P   V    WW   +++ W GH F++ LK +K++LK WN       R+R+  
Subjt:  VYGPNSYKERKSFWLELYDLQALCLPNWIVGVTSTSLDGLGKNLQTLPPPVMVD--SWWSSNSIQGWAGHGFIQNLKGLKNELKIWNQQNHSKQRDRQMS

Query:  LNLELSSIDQKEENGPLPEQDISRRSVIRAELMNLSATEETIWRQKCKLQWFVEGDVNSAFFHKIVSANRRRNTIVEVLTASRNSILNGDATEKEFIDF
        +  +L  ID  E+ G L    +S R++ R EL +L   EE  WRQK +++W  EGD NS FFH++ +  R R  I  +++    ++ N +   +E ++F
Subjt:  LNLELSSIDQKEENGPLPEQDISRRSVIRAELMNLSATEETIWRQKCKLQWFVEGDVNSAFFHKIVSANRRRNTIVEVLTASRNSILNGDATEKEFIDF

CAN78049.1 hypothetical protein VITISV_015861 [Vitis vinifera]2.2e-2329.96Show/hide
Query:  VYGPNSYKERKSFWLELYDLQALCLPNWIVG-------------------VTSTSLDGLGKNLQTLPPP----------VMVD-----------------
        VYGPN    RK FW+EL DL  L  P W VG                   V     D   +    L PP          + VD                 
Subjt:  VYGPNSYKERKSFWLELYDLQALCLPNWIVG-------------------VTSTSLDGLGKNLQTLPPP----------VMVD-----------------

Query:  ----SWWSSNSIQGWAGHGFIQNLKGLKNELKIWNQQNHSKQRDRQMSLNLELSSIDQKEENGPLPEQDISRRSVIRAELMNLSATEETIWRQKCKLQWF
             WW   +++GW GH F++ LK +K++LK WN       R+R+  +  +L  ID+ E+ G L    +S R++ R EL +L   EE  WRQK +++W 
Subjt:  ----SWWSSNSIQGWAGHGFIQNLKGLKNELKIWNQQNHSKQRDRQMSLNLELSSIDQKEENGPLPEQDISRRSVIRAELMNLSATEETIWRQKCKLQWF

Query:  VEGDVNSAFFHKIVSANRRRNTIVEVLTASRNSILNGDATEKEFIDF
         EGD NS FFH++ +  R R  I  +++    ++ N     +E ++F
Subjt:  VEGDVNSAFFHKIVSANRRRNTIVEVLTASRNSILNGDATEKEFIDF

CAN78865.1 hypothetical protein VITISV_013346 [Vitis vinifera]2.9e-2332.99Show/hide
Query:  VYGPNSYKERKSFWLELYDLQALCLPNWIVGVTSTSLDGLGKNLQTLPPPVMVDSWWSSNSIQGWAGHGFIQNLKGLKNELKIWNQQNHSKQRDRQMSLN
        VYGPNS   RK FW+EL+D+  L  P W   +           LQ          WWS     GW GH F++ L+ +K +LK WN+ +  + ++++ S+ 
Subjt:  VYGPNSYKERKSFWLELYDLQALCLPNWIVGVTSTSLDGLGKNLQTLPPPVMVDSWWSSNSIQGWAGHGFIQNLKGLKNELKIWNQQNHSKQRDRQMSLN

Query:  LELSSIDQKEENGPLPEQDISRRSVIRAELMNLSATEETIWRQKCKLQWFVEGDVNSAFFHKIVSANRRRNTIVEVLTASRNSILNGDATEKEFIDF
         +L++ D  E+ G L    +S+R+  + EL  L   EE  WRQK K++W  EGD NS F+HK+ +  R R  I E+       + N ++  +E + +
Subjt:  LELSSIDQKEENGPLPEQDISRRSVIRAELMNLSATEETIWRQKCKLQWFVEGDVNSAFFHKIVSANRRRNTIVEVLTASRNSILNGDATEKEFIDF

RVW31723.1 putative ribonuclease H protein [Vitis vinifera]2.5e-2729.31Show/hide
Query:  MVKSVWSSRNIPWTALHAYG----------VYGPNSYKERKSFWLELYDLQALCLPNWIVG-------------------VTSTSLDGLGKNLQTLPPP-
        +V SVW  +++ W AL A G          +YGPN    RK FWLEL DL  L  P W VG                   V     D   +    L PP 
Subjt:  MVKSVWSSRNIPWTALHAYG----------VYGPNSYKERKSFWLELYDLQALCLPNWIVG-------------------VTSTSLDGLGKNLQTLPPP-

Query:  ---------VMVD---------------------SWWSSNSIQGWAGHGFIQNLKGLKNELKIWNQQNHSKQRDRQMSLNLELSSIDQKEENGPLPEQDI
                 + VD                      WW   +++GW GH F++ LK +K++LK WN +     R+R+  +  +L  ID+ E+ G L    +
Subjt:  ---------VMVD---------------------SWWSSNSIQGWAGHGFIQNLKGLKNELKIWNQQNHSKQRDRQMSLNLELSSIDQKEENGPLPEQDI

Query:  SRRSVIRAELMNLSATEETIWRQKCKLQWFVEGDVNSAFFHKIVSANRRRNTIVEVLTASRNSILNGDATEKEFIDFNKASLPRRKSALP
        S R++ R EL +L   EE  WRQK +++W  EGD NS FFH++ +  R R  I  +++    ++ N +   +E +      L + K+  P
Subjt:  SRRSVIRAELMNLSATEETIWRQKCKLQWFVEGDVNSAFFHKIVSANRRRNTIVEVLTASRNSILNGDATEKEFIDFNKASLPRRKSALP

RVW83303.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]9.9e-2428.8Show/hide
Query:  VYGPNSYKERKSFWLELYDLQALCLPNWIVG-------------------VTSTSLDGLGKNLQTLP------PPVMVDS--------------------
        VYGPN    R+ FWLEL DL  L  P W VG                   V     D   +  + LP       P+ +++                    
Subjt:  VYGPNSYKERKSFWLELYDLQALCLPNWIVG-------------------VTSTSLDGLGKNLQTLP------PPVMVDS--------------------

Query:  --------WWSSNSIQGWAGHGFIQNLKGLKNELKIWNQQNHSKQRDRQMSLNLELSSIDQKEENGPLPEQDISRRSVIRAELMNLSATEETIWRQKCKL
                WW   +++GW GH F++ LK +K++LK WN +     R+R+  +  +L  ID+ E+ G L  + +S R + R EL +L   EE  WRQK ++
Subjt:  --------WWSSNSIQGWAGHGFIQNLKGLKNELKIWNQQNHSKQRDRQMSLNLELSSIDQKEENGPLPEQDISRRSVIRAELMNLSATEETIWRQKCKL

Query:  QWFVEGDVNSAFFHKIVSANRRRNTIVEVLTASRNSILNGDATEKEFIDF
        +W  EGD NS FFH++ +  R R  I  +++    ++ N +   +E ++F
Subjt:  QWFVEGDVNSAFFHKIVSANRRRNTIVEVLTASRNSILNGDATEKEFIDF

TrEMBL top hitse value%identityAlignment
A0A438D8E9 Putative ribonuclease H protein1.2e-2729.31Show/hide
Query:  MVKSVWSSRNIPWTALHAYG----------VYGPNSYKERKSFWLELYDLQALCLPNWIVG-------------------VTSTSLDGLGKNLQTLPPP-
        +V SVW  +++ W AL A G          +YGPN    RK FWLEL DL  L  P W VG                   V     D   +    L PP 
Subjt:  MVKSVWSSRNIPWTALHAYG----------VYGPNSYKERKSFWLELYDLQALCLPNWIVG-------------------VTSTSLDGLGKNLQTLPPP-

Query:  ---------VMVD---------------------SWWSSNSIQGWAGHGFIQNLKGLKNELKIWNQQNHSKQRDRQMSLNLELSSIDQKEENGPLPEQDI
                 + VD                      WW   +++GW GH F++ LK +K++LK WN +     R+R+  +  +L  ID+ E+ G L    +
Subjt:  ---------VMVD---------------------SWWSSNSIQGWAGHGFIQNLKGLKNELKIWNQQNHSKQRDRQMSLNLELSSIDQKEENGPLPEQDI

Query:  SRRSVIRAELMNLSATEETIWRQKCKLQWFVEGDVNSAFFHKIVSANRRRNTIVEVLTASRNSILNGDATEKEFIDFNKASLPRRKSALP
        S R++ R EL +L   EE  WRQK +++W  EGD NS FFH++ +  R R  I  +++    ++ N +   +E +      L + K+  P
Subjt:  SRRSVIRAELMNLSATEETIWRQKCKLQWFVEGDVNSAFFHKIVSANRRRNTIVEVLTASRNSILNGDATEKEFIDFNKASLPRRKSALP

A0A438HFR2 Transposon TX1 uncharacterized 149 kDa protein4.8e-2428.8Show/hide
Query:  VYGPNSYKERKSFWLELYDLQALCLPNWIVG-------------------VTSTSLDGLGKNLQTLP------PPVMVDS--------------------
        VYGPN    R+ FWLEL DL  L  P W VG                   V     D   +  + LP       P+ +++                    
Subjt:  VYGPNSYKERKSFWLELYDLQALCLPNWIVG-------------------VTSTSLDGLGKNLQTLP------PPVMVDS--------------------

Query:  --------WWSSNSIQGWAGHGFIQNLKGLKNELKIWNQQNHSKQRDRQMSLNLELSSIDQKEENGPLPEQDISRRSVIRAELMNLSATEETIWRQKCKL
                WW   +++GW GH F++ LK +K++LK WN +     R+R+  +  +L  ID+ E+ G L  + +S R + R EL +L   EE  WRQK ++
Subjt:  --------WWSSNSIQGWAGHGFIQNLKGLKNELKIWNQQNHSKQRDRQMSLNLELSSIDQKEENGPLPEQDISRRSVIRAELMNLSATEETIWRQKCKL

Query:  QWFVEGDVNSAFFHKIVSANRRRNTIVEVLTASRNSILNGDATEKEFIDF
        +W  EGD NS FFH++ +  R R  I  +++    ++ N +   +E ++F
Subjt:  QWFVEGDVNSAFFHKIVSANRRRNTIVEVLTASRNSILNGDATEKEFIDF

A5ALP8 Reverse transcriptase domain-containing protein1.1e-2329.96Show/hide
Query:  VYGPNSYKERKSFWLELYDLQALCLPNWIVG-------------------VTSTSLDGLGKNLQTLPPP----------VMVD-----------------
        VYGPN    RK FW+EL DL  L  P W VG                   V     D   +    L PP          + VD                 
Subjt:  VYGPNSYKERKSFWLELYDLQALCLPNWIVG-------------------VTSTSLDGLGKNLQTLPPP----------VMVD-----------------

Query:  ----SWWSSNSIQGWAGHGFIQNLKGLKNELKIWNQQNHSKQRDRQMSLNLELSSIDQKEENGPLPEQDISRRSVIRAELMNLSATEETIWRQKCKLQWF
             WW   +++GW GH F++ LK +K++LK WN       R+R+  +  +L  ID+ E+ G L    +S R++ R EL +L   EE  WRQK +++W 
Subjt:  ----SWWSSNSIQGWAGHGFIQNLKGLKNELKIWNQQNHSKQRDRQMSLNLELSSIDQKEENGPLPEQDISRRSVIRAELMNLSATEETIWRQKCKLQWF

Query:  VEGDVNSAFFHKIVSANRRRNTIVEVLTASRNSILNGDATEKEFIDF
         EGD NS FFH++ +  R R  I  +++    ++ N     +E ++F
Subjt:  VEGDVNSAFFHKIVSANRRRNTIVEVLTASRNSILNGDATEKEFIDF

A5BB51 Reverse transcriptase domain-containing protein1.8e-2333.67Show/hide
Query:  VYGPNSYKERKSFWLELYDLQALCLPNWIVGVTSTSLDGLGKNLQTLPPPVMVD--SWWSSNSIQGWAGHGFIQNLKGLKNELKIWNQQNHSKQRDRQMS
        VYG N    RK FWLEL DL  L  P W +                L P   V    WW   +++ W GH F++ LK +K++LK WN       R+R+  
Subjt:  VYGPNSYKERKSFWLELYDLQALCLPNWIVGVTSTSLDGLGKNLQTLPPPVMVD--SWWSSNSIQGWAGHGFIQNLKGLKNELKIWNQQNHSKQRDRQMS

Query:  LNLELSSIDQKEENGPLPEQDISRRSVIRAELMNLSATEETIWRQKCKLQWFVEGDVNSAFFHKIVSANRRRNTIVEVLTASRNSILNGDATEKEFIDF
        +  +L  ID  E+ G L    +S R++ R EL +L   EE  WRQK +++W  EGD NS FFH++ +  R R  I  +++    ++ N +   +E ++F
Subjt:  LNLELSSIDQKEENGPLPEQDISRRSVIRAELMNLSATEETIWRQKCKLQWFVEGDVNSAFFHKIVSANRRRNTIVEVLTASRNSILNGDATEKEFIDF

A5BCE8 Reverse transcriptase domain-containing protein1.4e-2332.99Show/hide
Query:  VYGPNSYKERKSFWLELYDLQALCLPNWIVGVTSTSLDGLGKNLQTLPPPVMVDSWWSSNSIQGWAGHGFIQNLKGLKNELKIWNQQNHSKQRDRQMSLN
        VYGPNS   RK FW+EL+D+  L  P W   +           LQ          WWS     GW GH F++ L+ +K +LK WN+ +  + ++++ S+ 
Subjt:  VYGPNSYKERKSFWLELYDLQALCLPNWIVGVTSTSLDGLGKNLQTLPPPVMVDSWWSSNSIQGWAGHGFIQNLKGLKNELKIWNQQNHSKQRDRQMSLN

Query:  LELSSIDQKEENGPLPEQDISRRSVIRAELMNLSATEETIWRQKCKLQWFVEGDVNSAFFHKIVSANRRRNTIVEVLTASRNSILNGDATEKEFIDF
         +L++ D  E+ G L    +S+R+  + EL  L   EE  WRQK K++W  EGD NS F+HK+ +  R R  I E+       + N ++  +E + +
Subjt:  LELSSIDQKEENGPLPEQDISRRSVIRAELMNLSATEETIWRQKCKLQWFVEGDVNSAFFHKIVSANRRRNTIVEVLTASRNSILNGDATEKEFIDF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein3.8e-0528.43Show/hide
Query:  QNLKGLKNELKIWNQQNHSKQRDRQMSLNLELSSIDQKEENGPLPEQDISRRSVIRAELMNLSATEETIWRQKCKLQWFVEGDVNSAFFHKIVSANRRRN
        ++LK  K   K+ N+Q     + +       L SI  +    P  +       V R +    +A  E+ +RQK +++W  +GD N+ FFHK++ AN+ +N
Subjt:  QNLKGLKNELKIWNQQNHSKQRDRQMSLNLELSSIDQKEENGPLPEQDISRRSVIRAELMNLSATEETIWRQKCKLQWFVEGDVNSAFFHKIVSANRRRN

Query:  TI
         I
Subjt:  TI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAAATCAGTTTGGAGCTCGAGGAACATACCTTGGACGGCTCTTCACGCATATGGAGTTTATGGGCCAAACTCTTATAAAGAGAGAAAATCCTTTTGGCTAGAGCT
TTATGACCTCCAAGCCCTCTGCCTTCCAAATTGGATCGTTGGGGTGACTTCAACATCACTAGATGGTCTTGGGAAAAATCTACAAACACTACCCCCACCCGTGATGGTGG
ATTCTTGGTGGAGTTCGAATTCAATTCAAGGATGGGCAGGCCACGGGTTTATCCAAAATTTAAAAGGGCTGAAAAACGAGCTTAAAATATGGAACCAGCAGAATCACAGT
AAACAGAGGGATAGGCAAATGTCATTGAACTTAGAACTTTCTTCTATTGATCAGAAAGAGGAGAATGGCCCCCTACCTGAACAAGATATTAGCAGGCGATCAGTTATCAG
AGCAGAATTGATGAATTTATCGGCCACAGAGGAAACTATATGGAGACAAAAATGTAAGCTCCAATGGTTTGTTGAAGGAGATGTTAACTCAGCCTTTTTCCACAAAATTG
TTTCAGCTAATAGAAGGAGAAATACAATAGTTGAAGTCCTTACAGCCTCTAGAAATAGCATTCTTAATGGTGATGCTACTGAGAAAGAATTTATTGATTTTAACAAGGCC
TCTTTACCAAGAAGAAAAAGCGCGCTCCCTTTCCAGTTATTGAAGATTGGAGCCCTATCTCTGCTGATCAAAAAGCCTCTCTTGAATTACCCTTCATTGAATCATAAATA
TATAGGGTTGTATTTGACCTTGGCACGAATAAGACTCCCGGACTTGATGGTTACACTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTAAATCAGTTTGGAGCTCGAGGAACATACCTTGGACGGCTCTTCACGCATATGGAGTTTATGGGCCAAACTCTTATAAAGAGAGAAAATCCTTTTGGCTAGAGCT
TTATGACCTCCAAGCCCTCTGCCTTCCAAATTGGATCGTTGGGGTGACTTCAACATCACTAGATGGTCTTGGGAAAAATCTACAAACACTACCCCCACCCGTGATGGTGG
ATTCTTGGTGGAGTTCGAATTCAATTCAAGGATGGGCAGGCCACGGGTTTATCCAAAATTTAAAAGGGCTGAAAAACGAGCTTAAAATATGGAACCAGCAGAATCACAGT
AAACAGAGGGATAGGCAAATGTCATTGAACTTAGAACTTTCTTCTATTGATCAGAAAGAGGAGAATGGCCCCCTACCTGAACAAGATATTAGCAGGCGATCAGTTATCAG
AGCAGAATTGATGAATTTATCGGCCACAGAGGAAACTATATGGAGACAAAAATGTAAGCTCCAATGGTTTGTTGAAGGAGATGTTAACTCAGCCTTTTTCCACAAAATTG
TTTCAGCTAATAGAAGGAGAAATACAATAGTTGAAGTCCTTACAGCCTCTAGAAATAGCATTCTTAATGGTGATGCTACTGAGAAAGAATTTATTGATTTTAACAAGGCC
TCTTTACCAAGAAGAAAAAGCGCGCTCCCTTTCCAGTTATTGAAGATTGGAGCCCTATCTCTGCTGATCAAAAAGCCTCTCTTGAATTACCCTTCATTGAATCATAAATA
TATAGGGTTGTATTTGACCTTGGCACGAATAAGACTCCCGGACTTGATGGTTACACTGTAG
Protein sequenceShow/hide protein sequence
MVKSVWSSRNIPWTALHAYGVYGPNSYKERKSFWLELYDLQALCLPNWIVGVTSTSLDGLGKNLQTLPPPVMVDSWWSSNSIQGWAGHGFIQNLKGLKNELKIWNQQNHS
KQRDRQMSLNLELSSIDQKEENGPLPEQDISRRSVIRAELMNLSATEETIWRQKCKLQWFVEGDVNSAFFHKIVSANRRRNTIVEVLTASRNSILNGDATEKEFIDFNKA
SLPRRKSALPFQLLKIGALSLLIKKPLLNYPSLNHKYIGLYLTLARIRLPDLMVTL