| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA8524269.1 hypothetical protein F0562_010692 [Nyssa sinensis] | 1.6e-96 | 45.87 | Show/hide |
Query: SPSDSNVWLSDIGCNAHLTSDLANLGISTAYNGEENITVGNGQSLPISHFGPGQLSLPNASFTLSNLFRVPDISTNLLSVHQLCIDNNCCFIFDSSSFTI
S N W +D G H+T+DLANL Y G++NIT+ NGQ+L ISH G + + +F L+N+ VP ++TNLLSVHQ C DN+C FIFDS F I
Subjt: SPSDSNVWLSDIGCNAHLTSDLANLGISTAYNGEENITVGNGQSLPISHFGPGQLSLPNASFTLSNLFRVPDISTNLLSVHQLCIDNNCCFIFDSSSFTI
Query: QDKSTGKVLFHGPSVNGLYPL----VAKSPSPA-QVTL-------------------------TAQVGIKASTIVWHDWLGHPCLSILNSVLNSSSIPVS
QDK+T ++LF GPS +GLYPL + K +P+ Q L TA +G + ST++WHD LGHP + L S+L+S+SI
Subjt: QDKSTGKVLFHGPSVNGLYPL----VAKSPSPA-QVTL-------------------------TAQVGIKASTIVWHDWLGHPCLSILNSVLNSSSIPVS
Query: RSDIGVCKHCLDGKLSKQPFLLSSSLSCSPLELLHSDAWGPAPDKSINGHRYYVSFVDDFSRYTWIFPMCYKSDVFSIFSQFLPFAKNLLSSRLNVFRSD
R +C+HCL GK++K PF LS++ S +PL+L+HSD WGPAP S + YYVSFVDDFS RSD
Subjt: RSDIGVCKHCLDGKLSKQPFLLSSSLSCSPLELLHSDAWGPAPDKSINGHRYYVSFVDDFSRYTWIFPMCYKSDVFSIFSQFLPFAKNLLSSRLNVFRSD
Query: GGGEYLSNDLKNLFANQGILHQKSCPYTPEQNGIDERKHRHIVNMALSLLSKSSIPMRFWFFAFATAEYLINRLPSPNLAHKSPFELLFKKPPDYTSLHV
GGGEY +L L GI H++SCP+TP+QNGI ERKHRHIV L+LLS++S+P+++W AF+TA YLINR+P+ L+H SP+E LF PPDYT L
Subjt: GGGEYLSNDLKNLFANQGILHQKSCPYTPEQNGIDERKHRHIVNMALSLLSKSSIPMRFWFFAFATAEYLINRLPSPNLAHKSPFELLFKKPPDYTSLHV
Query: FGCACYHLLRPY
FG ACY LL+PY
Subjt: FGCACYHLLRPY
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| KAB2610253.1 hypothetical protein D8674_018285 [Pyrus ussuriensis x Pyrus communis] | 4.3e-97 | 44.1 | Show/hide |
Query: NTSPSDSNVWLSDIGCNAHLTSDLANLGISTAYNGEENITVGNGQSLPISHFGPGQLSLPNASFTLSNLFRVPDISTNLLSVHQLCIDNNCCFIFDSSSF
++S + +WL+D G H+T+DL+NL +++ Y + + NG+ L +SH G + P L+++ VP +S NLLSVH++C+DNNC IFD+ F
Subjt: NTSPSDSNVWLSDIGCNAHLTSDLANLGISTAYNGEENITVGNGQSLPISHFGPGQLSLPNASFTLSNLFRVPDISTNLLSVHQLCIDNNCCFIFDSSSF
Query: TIQDKSTGKVLFHGPSVNGLYPL--VAKSP---SPAQVTLTAQVGIKASTIVWHDWLGHPCLSILNSVLNSSSIPVSRSDIG-VCKHCLDGKLSKQPFLL
IQDK TG++L+ G NGLYP+ +AK P SP + +A +G S+ +WH LGHP +I++++L+ ++I S+ D+ VC CL+GK +K PF
Subjt: TIQDKSTGKVLFHGPSVNGLYPL--VAKSP---SPAQVTLTAQVGIKASTIVWHDWLGHPCLSILNSVLNSSSIPVSRSDIG-VCKHCLDGKLSKQPFLL
Query: SSSLSCSPLELLHSDAWGPAPDKSINGHRYYVSFVDDFSRYTWIFPMCYKSDVFSIFSQFLPFAKNLLSSRLNVFRSDGGGEYLSNDLKNLFANQGILHQ
S+ S P E++HSD WGPAP SI+G ++YV+ +D+ +R+ W+FP+ KSD F F F F + S+ + + +SDGGGEY+++ L+ +G++H
Subjt: SSSLSCSPLELLHSDAWGPAPDKSINGHRYYVSFVDDFSRYTWIFPMCYKSDVFSIFSQFLPFAKNLLSSRLNVFRSDGGGEYLSNDLKNLFANQGILHQ
Query: KSCPYTPEQNGIDERKHRHIVNMALSLLSKSSIPMRFWFFAFATAEYLINRLPSPNLAHKSPFELLFKKPPDYTSLHVFGCACYHLLRPY
SCPYTPEQNG+ ERKHRH++ ++LL + +P +FW FA A YLINR+P+P L HKSPFELLF P T L VFGC+C+ LL+PY
Subjt: KSCPYTPEQNGIDERKHRHIVNMALSLLSKSSIPMRFWFFAFATAEYLINRLPSPNLAHKSPFELLFKKPPDYTSLHVFGCACYHLLRPY
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| PKU75882.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Dendrobium catenatum] | 8.2e-96 | 45.52 | Show/hide |
Query: PGTLLNTSPS--DSNVWLSDIGCNAHLTSDLANLGISTAYNGEENITVGNGQSLPISHFGPGQLSLPNASFTLSNLFRVPDISTNLLSVHQLCIDNNCCF
P T +SPS S+ W D G + HLTSD S Y G + +GNG LPI + G G L P S L NL VP++S NLLSV+QL DNNC
Subjt: PGTLLNTSPS--DSNVWLSDIGCNAHLTSDLANLGISTAYNGEENITVGNGQSLPISHFGPGQLSLPNASFTLSNLFRVPDISTNLLSVHQLCIDNNCCF
Query: IFDSSSFTIQDKSTGKVLFHGPSVNGLYPLVAKSPSPAQVTLTAQVGIKASTIVWHDWLGHPCLSILNSVLNSSSIPVSRSDIGVCKHCLDGKLSKQPFL
F S F I+D T +VL GP +NGLY + A SP+ ++ L A + ++A +WH LGHP S L+S+ S S +C C K ++PF
Subjt: IFDSSSFTIQDKSTGKVLFHGPSVNGLYPLVAKSPSPAQVTLTAQVGIKASTIVWHDWLGHPCLSILNSVLNSSSIPVSRSDIGVCKHCLDGKLSKQPFL
Query: LSSSLSCSPLELLHSDAWGPAPDKSINGHRYYVSFVDDFSRYTWIFPMCYKSDVFSIFSQFLPFAKNLLSSRLNVFRSDGGGEYLSNDLKNLFANQGILH
+S S S SP +L+HSD WGP+P S G+RYYVSF+D+FS++TW++P+ +KS+VF F +F K + + + R+DGGGE+++N L N GI+H
Subjt: LSSSLSCSPLELLHSDAWGPAPDKSINGHRYYVSFVDDFSRYTWIFPMCYKSDVFSIFSQFLPFAKNLLSSRLNVFRSDGGGEYLSNDLKNLFANQGILH
Query: QKSCPYTPEQNGIDERKHRHIVNMALSLLSKSSIPMRFWFFAFATAEYLINRLPSPNLAHKSPFELLFKKPPDYTSLHVFGCACYHLLRPY
Q +CPY+P QNG+ ERKHRH+ SLL ++S+P FW TA YLINRLPSPN +HKSP+E+L+++ P+Y L VFGC CY L+PY
Subjt: QKSCPYTPEQNGIDERKHRHIVNMALSLLSKSSIPMRFWFFAFATAEYLINRLPSPNLAHKSPFELLFKKPPDYTSLHVFGCACYHLLRPY
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| RWR76373.1 putative polyprotein [Cinnamomum micranthum f. kanehirae] | 4.2e-100 | 46.44 | Show/hide |
Query: WLSDIGCNAHLTSDLANLGISTAYNGEENITVGNGQSLPISHFGPGQLSLPNASFTLSNLFRVPDISTNLLSVHQLCIDNNCCFIFDSSSFTIQDKSTGK
W +D G H+TS++ NL + + Y+ + ++VGNG L ISH G +S P+++F L+N+ VP ISTNL+SVH+ DNNC FIFDSS F I+DK++GK
Subjt: WLSDIGCNAHLTSDLANLGISTAYNGEENITVGNGQSLPISHFGPGQLSLPNASFTLSNLFRVPDISTNLLSVHQLCIDNNCCFIFDSSSFTIQDKSTGK
Query: VLFHGPSVNGLYPL-VAKSPSPAQVT-LTAQVGIKASTIVWHDWLGHPCLSILNSVLNSSSIPVSRSD--IGVCKHCLDGKLSKQPFLLSSSLSCSPLEL
LF G S NGLYP + + P+ + A VG + + +WH LGHP ++ + ++ +PV S +C C GK K PF +SSS+S +PL+L
Subjt: VLFHGPSVNGLYPL-VAKSPSPAQVT-LTAQVGIKASTIVWHDWLGHPCLSILNSVLNSSSIPVSRSD--IGVCKHCLDGKLSKQPFLLSSSLSCSPLEL
Query: LHSDAWGPAPDKSINGHRYYVSFVDDFSRYTWIFPMCYKSDVFSIFSQFLPFAKNLLSSRLNVFRSDGGGEYLSNDLKNLFANQGILHQKSCPYTPEQNG
+H D WG +P+ SI+G+ YYVSF+DD ++Y W +P+ KS F F +F + +N+LS+ + F+SDGGGE++SN +N + GI H+ SCP+TPEQNG
Subjt: LHSDAWGPAPDKSINGHRYYVSFVDDFSRYTWIFPMCYKSDVFSIFSQFLPFAKNLLSSRLNVFRSDGGGEYLSNDLKNLFANQGILHQKSCPYTPEQNG
Query: IDERKHRHIVNMALSLLSKSSIPMRFWFFAFATAEYLINRLPSPNLAHKSPFELLFKKPPDYTSLHVFGCACYHLLRPY
+ ERKH HIV M L+LL+ S +P+++W AF TA +LINRLP+ L +KSP+E LF + P+Y LH FGC C+ LRPY
Subjt: IDERKHRHIVNMALSLLSKSSIPMRFWFFAFATAEYLINRLPSPNLAHKSPFELLFKKPPDYTSLHVFGCACYHLLRPY
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| TQE09310.1 hypothetical protein C1H46_005046 [Malus baccata] | 1.3e-98 | 46.85 | Show/hide |
Query: ASTSHSSPGTLLNTSPSDSNVWLSDIGCNAHLTSDLANLGISTAYNGEENITVGNGQSLPISHFGPGQLSLPNASFTLSNLFRVPDISTNLLSVHQLCID
A T+ S+P ++S S WL D G H+TSDL+NL ++ Y+ + IT NG L I+H G LSLP + L+++ VP +S +LLS+HQLC D
Subjt: ASTSHSSPGTLLNTSPSDSNVWLSDIGCNAHLTSDLANLGISTAYNGEENITVGNGQSLPISHFGPGQLSLPNASFTLSNLFRVPDISTNLLSVHQLCID
Query: NNCCFIFDSSSFTIQDKSTGKVLFHGPSVNGLYPLVAKSPSPAQVTLTAQVGIKASTIVWHDWLGHPCLSILNSVLNSSSIPVSRSDIG-VCKHCLDGKL
NNC I D S IQDK T KVL+ G S N +YPL SP V+ A +G + S+ +WH LGHP +L + L+ + I S +D CK CL GK
Subjt: NNCCFIFDSSSFTIQDKSTGKVLFHGPSVNGLYPLVAKSPSPAQVTLTAQVGIKASTIVWHDWLGHPCLSILNSVLNSSSIPVSRSDIG-VCKHCLDGKL
Query: SKQPFLLSSSLSCSPLELLHSDAWGPAPDKSINGHRYYVSFVDDFSRYTWIFPMCYKSDVFSIFSQFLPFAKNLLSSRLNVFRSDGGGEYLSNDLKNLFA
+ PF +S S P E++H+D WGP+P SI +RYYVSF+D+ +RYTWIFP+ K+ VF +F QF F N + + +SDGGGEY+ +N
Subjt: SKQPFLLSSSLSCSPLELLHSDAWGPAPDKSINGHRYYVSFVDDFSRYTWIFPMCYKSDVFSIFSQFLPFAKNLLSSRLNVFRSDGGGEYLSNDLKNLFA
Query: NQGILHQKSCPYTPEQNGIDERKHRHIVNMALSLLSKSSIPMRFWFFAFATAEYLINRLPSPNLAHKSPFELLFKKPPDYTSLHVFGCACYHLLRPY
+GILH KSCPYTP+QNG+ ERK+RHI A++LL ++ +P +FW+ A ATA YLINR+P+P LA +SPFE L+ PP L +FGCACY LRPY
Subjt: NQGILHQKSCPYTPEQNGIDERKHRHIVNMALSLLSKSSIPMRFWFFAFATAEYLINRLPSPNLAHKSPFELLFKKPPDYTSLHVFGCACYHLLRPY
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2N9FMC6 Integrase catalytic domain-containing protein | 7.4e-103 | 47.59 | Show/hide |
Query: NTSPSDSNVWLSDIGCNAHLTSDLANLGISTAYNGEENITVGNGQSLPISHFGPGQLSLPNASFTLSNLFRVPDISTNLLSVHQLCIDNNCCFIFDSSSF
N +PS + W+SD G H T DL NL Y G + +++GNG LPI+H G QL + F L + RVP + TNLLSV++ C DN C F FD++ F
Subjt: NTSPSDSNVWLSDIGCNAHLTSDLANLGISTAYNGEENITVGNGQSLPISHFGPGQLSLPNASFTLSNLFRVPDISTNLLSVHQLCIDNNCCFIFDSSSF
Query: TIQDKSTGKVLFHGPSVNGLYPLVAKSPSPAQVT--------LTAQVGIKASTIVWHDWLGHPCLSILNSVLNSS---SIPVSRSDIGVCKHCLDGKLSK
+IQD +G+ L+ G S +GLYP++ S S T +A +G K + VWH LGHP +L+SVLN S+ ++ C HC+ GKL +
Subjt: TIQDKSTGKVLFHGPSVNGLYPLVAKSPSPAQVT--------LTAQVGIKASTIVWHDWLGHPCLSILNSVLNSS---SIPVSRSDIGVCKHCLDGKLSK
Query: QPFLLSSSLSCSPLELLHSDAWGPAPDKSINGHRYYVSFVDDFSRYTWIFPMCYKSDVFSIFSQFLPFAKNLLSSRLNVFRSDGGGEYLSNDLKNLFANQ
PF SS + +PLEL+HSD WGPAP SING R+YVSFVD F+R+TW+FP+ +KS V + F F +N+L++R+ V R+D GGEY ++ ++ + +
Subjt: QPFLLSSSLSCSPLELLHSDAWGPAPDKSINGHRYYVSFVDDFSRYTWIFPMCYKSDVFSIFSQFLPFAKNLLSSRLNVFRSDGGGEYLSNDLKNLFANQ
Query: GILHQKSCPYTPEQNGIDERKHRHIVNMALSLLSKSSIPMRFWFFAFATAEYLINRLPSPNLAHKSPFELLFKKPPDYTSLHVFGCACYHLLRPY
GILHQ SCP+TP+QNG+ ERKHRHIV AL+L+S+SS+P+++W +AF+TA YLINR+P+PNL SP++LLF PDY+ L FGC C+ LLRPY
Subjt: GILHQKSCPYTPEQNGIDERKHRHIVNMALSLLSKSSIPMRFWFFAFATAEYLINRLPSPNLAHKSPFELLFKKPPDYTSLHVFGCACYHLLRPY
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| A0A2N9G7E3 Integrase catalytic domain-containing protein | 1.3e-102 | 49 | Show/hide |
Query: NTSPSDSNVWLSDIGCNAHLTSDLANLGISTAYNGEENITVGNGQSLPISHFGPGQLSLPNASFTLSNLFRVPDISTNLLSVHQLCIDNNCCFIFDSSSF
+++ S SN W+SD G H T DLANL + YNG + +TVGNGQ LPI+H G QL L RVP++ TNLLSV + C DNNCCF FD+S F
Subjt: NTSPSDSNVWLSDIGCNAHLTSDLANLGISTAYNGEENITVGNGQSLPISHFGPGQLSLPNASFTLSNLFRVPDISTNLLSVHQLCIDNNCCFIFDSSSF
Query: TIQDKSTGKVLFHGPSVNGLYPLV--------AKSPSPA-------QVTLTAQVGIKASTIVWHDWLGHPCLSILNSV---LNSSSIPVSRSDIGVCKHC
+IQD +GKVL+ G + GLYP+ ++P P +A K S+ WH LGHP IL SV L +S I S S+ CKHC
Subjt: TIQDKSTGKVLFHGPSVNGLYPLV--------AKSPSPA-------QVTLTAQVGIKASTIVWHDWLGHPCLSILNSV---LNSSSIPVSRSDIGVCKHC
Query: LDGKLSKQPFLLSSSLSCSPLELLHSDAWGPAPDKSINGHRYYVSFVDDFSRYTWIFPMCYKSDVFSIFSQFLPFAKNLLSSRLNVFRSDGGGEYLSNDL
GK+S+ PF S + + PL+L+HSD WGPAP SING RYYVSF+DDFS++TW FP+ +KS V S F F +NLL+ +L V R+D GGEY +
Subjt: LDGKLSKQPFLLSSSLSCSPLELLHSDAWGPAPDKSINGHRYYVSFVDDFSRYTWIFPMCYKSDVFSIFSQFLPFAKNLLSSRLNVFRSDGGGEYLSNDL
Query: KNLFANQGILHQKSCPYTPEQNGIDERKHRHIVNMALSLLSKSSIPMRFWFFAFATAEYLINRLPSPNLAHKSPFELLFKKPPDYTSLHVFGCACYHLLR
++ ++QGI HQ SCP+TP+QNG+ ERKHRHI+ AL+L+S+SS+P+ +W +AFA++ +LINRLP+ +L KSP+E+LF PPDY+ VFGC+CY LL
Subjt: KNLFANQGILHQKSCPYTPEQNGIDERKHRHIVNMALSLLSKSSIPMRFWFFAFATAEYLINRLPSPNLAHKSPFELLFKKPPDYTSLHVFGCACYHLLR
Query: PY
PY
Subjt: PY
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| A0A2N9GRJ0 Uncharacterized protein | 7.4e-103 | 47.59 | Show/hide |
Query: NTSPSDSNVWLSDIGCNAHLTSDLANLGISTAYNGEENITVGNGQSLPISHFGPGQLSLPNASFTLSNLFRVPDISTNLLSVHQLCIDNNCCFIFDSSSF
N +PS + W+SD G H T DL NL Y G + +++GNG LPI+H G QL + F L + RVP + TNLLSV++ C DN C F FD++ F
Subjt: NTSPSDSNVWLSDIGCNAHLTSDLANLGISTAYNGEENITVGNGQSLPISHFGPGQLSLPNASFTLSNLFRVPDISTNLLSVHQLCIDNNCCFIFDSSSF
Query: TIQDKSTGKVLFHGPSVNGLYPLVAKSPSPAQVT--------LTAQVGIKASTIVWHDWLGHPCLSILNSVLNSS---SIPVSRSDIGVCKHCLDGKLSK
+IQD +G+ L+ G S +GLYP++ S S T +A +G K + VWH LGHP +L+SVLN S+ ++ C HC+ GKL +
Subjt: TIQDKSTGKVLFHGPSVNGLYPLVAKSPSPAQVT--------LTAQVGIKASTIVWHDWLGHPCLSILNSVLNSS---SIPVSRSDIGVCKHCLDGKLSK
Query: QPFLLSSSLSCSPLELLHSDAWGPAPDKSINGHRYYVSFVDDFSRYTWIFPMCYKSDVFSIFSQFLPFAKNLLSSRLNVFRSDGGGEYLSNDLKNLFANQ
PF SS + +PLEL+HSD WGPAP SING R+YVSFVD F+R+TW+FP+ +KS V + F F +N+L++R+ V R+D GGEY ++ ++ + +
Subjt: QPFLLSSSLSCSPLELLHSDAWGPAPDKSINGHRYYVSFVDDFSRYTWIFPMCYKSDVFSIFSQFLPFAKNLLSSRLNVFRSDGGGEYLSNDLKNLFANQ
Query: GILHQKSCPYTPEQNGIDERKHRHIVNMALSLLSKSSIPMRFWFFAFATAEYLINRLPSPNLAHKSPFELLFKKPPDYTSLHVFGCACYHLLRPY
GILHQ SCP+TP+QNG+ ERKHRHIV AL+L+S+SS+P+++W +AF+TA YLINR+P+PNL SP++LLF PDY+ L FGC C+ LLRPY
Subjt: GILHQKSCPYTPEQNGIDERKHRHIVNMALSLLSKSSIPMRFWFFAFATAEYLINRLPSPNLAHKSPFELLFKKPPDYTSLHVFGCACYHLLRPY
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| A0A2N9I765 Integrase catalytic domain-containing protein | 5.3e-101 | 49.38 | Show/hide |
Query: ASTSHSSPGTLLNTSPSDSNVWLSDIGCNAHLTSDLANLGISTAYNGEENITVGNGQSLPISHFGPGQLSLPNASFTLSNLFRVPDISTNLLSVHQLCID
ASTS+ + G + WL+D G HLT+++ NL + T Y G + + VGNGQS+PI++ G GQL+ F L+NL IS+NLLSVH+LC D
Subjt: ASTSHSSPGTLLNTSPSDSNVWLSDIGCNAHLTSDLANLGISTAYNGEENITVGNGQSLPISHFGPGQLSLPNASFTLSNLFRVPDISTNLLSVHQLCID
Query: NNCCFIFDSSSFTIQDKSTGKVLFHGPSVNGLYPLVAKSPSP----AQVTLTAQVGIKASTIVWHDWLGHPCLSILNSVLNSSSIPVSRSDIGV---CKH
N C FDS+ F IQD +GKVL+ G S NGLYP + PSP A T++A + K +WH LGHP +L S L S S +S + V CKH
Subjt: NNCCFIFDSSSFTIQDKSTGKVLFHGPSVNGLYPLVAKSPSP----AQVTLTAQVGIKASTIVWHDWLGHPCLSILNSVLNSSSIPVSRSDIGV---CKH
Query: CLDGKLSKQPFLLSSSLSCSPLELLHSDAWGPAPDKSINGHRYYVSFVDDFSRYTWIFPMCYKSDVFSIFSQFLPFAKNLLSSRLNVFRSDGGGEYLSND
CL GK+ K PF S S PLEL+HSD WGPAP S NG++YY+ FVDDFS+Y+W+F + KSDV + F F + LS+++ R+D GGEY SN
Subjt: CLDGKLSKQPFLLSSSLSCSPLELLHSDAWGPAPDKSINGHRYYVSFVDDFSRYTWIFPMCYKSDVFSIFSQFLPFAKNLLSSRLNVFRSDGGGEYLSND
Query: LKNLFANQGILHQKSCPYTPEQNGIDERKHRHIVNMALSLLSKSSIPMRFWFFAFATAEYLINRLPSPNLAHKSPFELLFKKPPDYTSLHVFGCACYHLL
+ ++ GI HQ SCP+TP+QNGI ERKHRHI+ AL+LLS +S+P W +A TA +LINRLPSP+L+HKSP+E LF K PD T L FGC CY L
Subjt: LKNLFANQGILHQKSCPYTPEQNGIDERKHRHIVNMALSLLSKSSIPMRFWFFAFATAEYLINRLPSPNLAHKSPFELLFKKPPDYTSLHVFGCACYHLL
Query: RPY
RPY
Subjt: RPY
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| A0A2N9IEP2 Uncharacterized protein | 1.8e-101 | 46.79 | Show/hide |
Query: NTSPSDSNVWLSDIGCNAHLTSDLANLGISTAYNGEENITVGNGQSLPISHFGPGQLSLPNASFTLSNLFRVPDISTNLLSVHQLCIDNNCCFIFDSSSF
N+ SD + W+SD G H T DL+ + Y G + TVGNGQ++PI+H G QL + F L + RVP +++NLLSV++ C DNNCCF+FD++ F
Subjt: NTSPSDSNVWLSDIGCNAHLTSDLANLGISTAYNGEENITVGNGQSLPISHFGPGQLSLPNASFTLSNLFRVPDISTNLLSVHQLCIDNNCCFIFDSSSF
Query: TIQDKSTGKVLFHGPSVNGLYPLVAKS-PSPAQVT--LTAQVGIKASTIVWHDWLGHPCLSILNSVLNSSSIPVSRSD--IGVCKHCLDGKLSKQPFLLS
I+D TGK+L+ GPS NGLYP+ S P P + + Q S+ VWHD LGHP + + ++S + S S+ C HC+ GK++ PF S
Subjt: TIQDKSTGKVLFHGPSVNGLYPLVAKS-PSPAQVT--LTAQVGIKASTIVWHDWLGHPCLSILNSVLNSSSIPVSRSD--IGVCKHCLDGKLSKQPFLLS
Query: SSLSCSPLELLHSDAWGPAPDKSINGHRYYVSFVDDFSRYTWIFPMCYKSDVFSIFSQFLPFAKNLLSSRLNVFRSDGGGEYLSNDLKNLFANQGILHQK
S +C PLE++HSD WGP+P S G R+YV FVD+F+R+TW +P+ KS V S F F +NLL+ ++ + R+D GGEY SN+ + + GI HQ
Subjt: SSLSCSPLELLHSDAWGPAPDKSINGHRYYVSFVDDFSRYTWIFPMCYKSDVFSIFSQFLPFAKNLLSSRLNVFRSDGGGEYLSNDLKNLFANQGILHQK
Query: SCPYTPEQNGIDERKHRHIVNMALSLLSKSSIPMRFWFFAFATAEYLINRLPSPNLAHKSPFELLFKKPPDYTSLHVFGCACYHLLRPY
+CP+T +QNG+ ERKHRHIV++AL+L+S+SS+P+ FW +AF+TA YLINR+P N SP+ELLF + P+Y SL FGC CY L+RPY
Subjt: SCPYTPEQNGIDERKHRHIVNMALSLLSKSSIPMRFWFFAFATAEYLINRLPSPNLAHKSPFELLFKKPPDYTSLHVFGCACYHLLRPY
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 7.8e-33 | 29.55 | Show/hide |
Query: NTSPSDSNVWLSDIGCNAHLTSDLANLGISTAYNGEENITVG-NGQSLPISHFGPGQLSLPNASFTLSNLFRVPDISTNLLSVHQLCIDNNCCFIFDSSS
NTS D+ ++ D G + HL +D + S I V G+ + + G +L + TL ++ + + NL+SV +L + FD S
Subjt: NTSPSDSNVWLSDIGCNAHLTSDLANLGISTAYNGEENITVG-NGQSLPISHFGPGQLSLPNASFTLSNLFRVPDISTNLLSVHQLCIDNNCCFIFDSSS
Query: FTIQD------KSTGKVLFHGPSVN-GLYPLVAKSPSPAQVTLTAQVGIKASTIVWHDWLGH----PCLSILNSVLNSSSIPVSRSDIG--VCKHCLDGK
TI K++G +L + P +N Y + AK K + +WH+ GH L I + S ++ ++ +C+ CL+GK
Subjt: FTIQD------KSTGKVLFHGPSVN-GLYPLVAKSPSPAQVTLTAQVGIKASTIVWHDWLGH----PCLSILNSVLNSSSIPVSRSDIG--VCKHCLDGK
Query: LSKQPF--LLSSSLSCSPLELLHSDAWGPAPDKSINGHRYYVSFVDDFSRYTWIFPMCYKSDVFSIFSQFLPFAKNLLSSRLNVFRSDGGGEYLSNDLKN
++ PF L + PL ++HSD GP +++ Y+V FVD F+ Y + + YKSDVFS+F F+ ++ + ++ D G EYLSN+++
Subjt: LSKQPF--LLSSSLSCSPLELLHSDAWGPAPDKSINGHRYYVSFVDDFSRYTWIFPMCYKSDVFSIFSQFLPFAKNLLSSRLNVFRSDGGGEYLSNDLKN
Query: LFANQGILHQKSCPYTPEQNGIDERKHRHIVNMALSLLSKSSIPMRFWFFAFATAEYLINRLPSPNL--AHKSPFELLFKKPPDYTSLHVFGCACY
+GI + + P+TP+ NG+ ER R I A +++S + + FW A TA YLINR+PS L + K+P+E+ K P L VFG Y
Subjt: LFANQGILHQKSCPYTPEQNGIDERKHRHIVNMALSLLSKSSIPMRFWFFAFATAEYLINRLPSPNL--AHKSPFELLFKKPPDYTSLHVFGCACY
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.6e-38 | 32.81 | Show/hide |
Query: SFTLSNLFRVPDISTNLLSVHQLCIDNNCCFIFDSSSFTIQDKSTGKVLFHGPSVNGLYPLVAKSPSPAQVTLTAQVGIKASTIVWHDWLGHPCLSILNS
+ L ++ VPD+ NL+S L D + F + + + S V+ G + LY A+ Q L A + S +WH +GH L
Subjt: SFTLSNLFRVPDISTNLLSVHQLCIDNNCCFIFDSSSFTIQDKSTGKVLFHGPSVNGLYPLVAKSPSPAQVTLTAQVGIKASTIVWHDWLGHPCLSILNS
Query: VLNSSSIPVSR-SDIGVCKHCLDGKLSKQPFLLSSSLSCSPLELLHSDAWGPAPDKSINGHRYYVSFVDDFSRYTWIFPMCYKSDVFSIFSQFLPFAKNL
+ S I ++ + + C +CL GK + F SS + L+L++SD GP +S+ G++Y+V+F+DD SR W++ + K VF +F +F +
Subjt: VLNSSSIPVSR-SDIGVCKHCLDGKLSKQPFLLSSSLSCSPLELLHSDAWGPAPDKSINGHRYYVSFVDDFSRYTWIFPMCYKSDVFSIFSQFLPFAKNL
Query: LSSRLNVFRSDGGGEYLSNDLKNLFANQGILHQKSCPYTPEQNGIDERKHRHIVNMALSLLSKSSIPMRFWFFAFATAEYLINRLPSPNLAHKSPFELLF
+L RSD GGEY S + + ++ GI H+K+ P TP+ NG+ ER +R IV S+L + +P FW A TA YLINR PS LA + P +
Subjt: LSSRLNVFRSDGGGEYLSNDLKNLFANQGILHQKSCPYTPEQNGIDERKHRHIVNMALSLLSKSSIPMRFWFFAFATAEYLINRLPSPNLAHKSPFELLF
Query: KKPPDYTSLHVFGCACY
K Y+ L VFGC +
Subjt: KKPPDYTSLHVFGCACY
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| Q07791 Transposon Ty2-DR3 Gag-Pol polyprotein | 2.1e-25 | 27.25 | Show/hide |
Query: SSPGTLLNTSPSDSNVWLSDIGCNAHLTSDLANLGISTAYNGEENITVGNGQSLPISHFGPGQLSLPNASFTLSNLFRVPDISTNLLSVHQLCIDN-NCC
S P ++++ + L D G + L L +T N E NI Q +PI+ G + N + T P+I+ +LLS+ +L N C
Subjt: SSPGTLLNTSPSDSNVWLSDIGCNAHLTSDLANLGISTAYNGEENITVGNGQSLPISHFGPGQLSLPNASFTLSNLFRVPDISTNLLSVHQLCIDN-NCC
Query: FIFDSSSFTIQDKSTGKVLFHGPSVNGLYPLVAKSPSPAQVT-LTAQVGIKASTI------VWHDWLGHPCL-SILNSV-------LNSSSIPVSRSDIG
F ++ ++S G VL Y L K P+ ++ LT K+ ++ + H LGH SI S+ L S I S +
Subjt: FIFDSSSFTIQDKSTGKVLFHGPSVNGLYPLVAKSPSPAQVT-LTAQVGIKASTI------VWHDWLGHPCL-SILNSV-------LNSSSIPVSRSDIG
Query: VCKHCLDGKLSKQPFLLSSSL----SCSPLELLHSDAWGPAPDKSINGHRYYVSFVDDFSRYTWIFPMCYKSD--VFSIFSQFLPFAKNLLSSRLNVFRS
C CL GK +K + S L S P + LH+D +GP + Y++SF D+ +R+ W++P+ + + + ++F+ L F KN ++R+ V +
Subjt: VCKHCLDGKLSKQPFLLSSSL----SCSPLELLHSDAWGPAPDKSINGHRYYVSFVDDFSRYTWIFPMCYKSD--VFSIFSQFLPFAKNLLSSRLNVFRS
Query: DGGGEYLSNDLKNLFANQGILHQKSCPYTPEQNGIDERKHRHIVNMALSLLSKSSIPMRFWFFAFATAEYLINRLPSP
D G EY + L F N+GI + +G+ ER +R ++N +LL S +P WF A + + N L SP
Subjt: DGGGEYLSNDLKNLFANQGILHQKSCPYTPEQNGIDERKHRHIVNMALSLLSKSSIPMRFWFFAFATAEYLINRLPSP
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.8e-83 | 44.53 | Show/hide |
Query: SPSDSNVWLSDIGCNAHLTSDLANLGISTAYNGEENITVGNGQSLPISHFGPGQLSLPNASFTLSNLFRVPDISTNLLSVHQLCIDNNCCFIFDSSSFTI
SP SN WL D G H+TSD NL + Y G +++ V +G ++PISH G LS + L N+ VP+I NL+SV++LC N F +SF +
Subjt: SPSDSNVWLSDIGCNAHLTSDLANLGISTAYNGEENITVGNGQSLPISHFGPGQLSLPNASFTLSNLFRVPDISTNLLSVHQLCIDNNCCFIFDSSSFTI
Query: QDKSTGKVLFHGPSVNGLYPLVAKSPSPAQVTLTAQVGIKASTIVWHDWLGHPCLSILNSVLNSSSIPVSRSD--IGVCKHCLDGKLSKQPFLLSSSLSC
+D +TG L G + + LY S P V+L A KA+ WH LGHP SILNSV+++ S+ V C CL K +K PF S+ S
Subjt: QDKSTGKVLFHGPSVNGLYPLVAKSPSPAQVTLTAQVGIKASTIVWHDWLGHPCLSILNSVLNSSSIPVSRSD--IGVCKHCLDGKLSKQPFLLSSSLSC
Query: SPLELLHSDAWGPAPDKSINGHRYYVSFVDDFSRYTWIFPMCYKSDVFSIFSQFLPFAKNLLSSRLNVFRSDGGGEYLSNDLKNLFANQGILHQKSCPYT
PLE ++SD W +P S + +RYYV FVD F+RYTW++P+ KS V F F +N +R+ F SD GGE+++ L F+ GI H S P+T
Subjt: SPLELLHSDAWGPAPDKSINGHRYYVSFVDDFSRYTWIFPMCYKSDVFSIFSQFLPFAKNLLSSRLNVFRSDGGGEYLSNDLKNLFANQGILHQKSCPYT
Query: PEQNGIDERKHRHIVNMALSLLSKSSIPMRFWFFAFATAEYLINRLPSPNLAHKSPFELLFKKPPDYTSLHVFGCACYHLLRPY
PE NG+ ERKHRHIV L+LLS +SIP +W +AFA A YLINRLP+P L +SPF+ LF P+Y L VFGCACY LRPY
Subjt: PEQNGIDERKHRHIVNMALSLLSKSSIPMRFWFFAFATAEYLINRLPSPNLAHKSPFELLFKKPPDYTSLHVFGCACYHLLRPY
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.4e-82 | 42.18 | Show/hide |
Query: STSHSSP----GTLLNTSPSDSNVWLSDIGCNAHLTSDLANLGISTAYNGEENITVGNGQSLPISHFGPGQLSLPNASFTLSNLFRVPDISTNLLSVHQL
STS +P L SP ++N WL D G H+TSD NL Y G +++ + +G ++PI+H G L + S L+ + VP+I NL+SV++L
Subjt: STSHSSP----GTLLNTSPSDSNVWLSDIGCNAHLTSDLANLGISTAYNGEENITVGNGQSLPISHFGPGQLSLPNASFTLSNLFRVPDISTNLLSVHQL
Query: CIDNNCCFIFDSSSFTIQDKSTGKVLFHGPSVNGLY--PLVAKSPSPAQVTLTAQVGIKASTIVWHDWLGHPCLSILNSVLNSSSIPVSRSD--IGVCKH
C N F +SF ++D +TG L G + + LY P+ S V++ A KA+ WH LGHP L+ILNSV+++ S+PV + C
Subjt: CIDNNCCFIFDSSSFTIQDKSTGKVLFHGPSVNGLY--PLVAKSPSPAQVTLTAQVGIKASTIVWHDWLGHPCLSILNSVLNSSSIPVSRSD--IGVCKH
Query: CLDGKLSKQPFLLSSSLSCSPLELLHSDAWGPAPDKSINGHRYYVSFVDDFSRYTWIFPMCYKSDVFSIFSQFLPFAKNLLSSRLNVFRSDGGGEYLSND
C K K PF S+ S PLE ++SD W +P SI+ +RYYV FVD F+RYTW++P+ KS V F F +N +R+ SD GGE++
Subjt: CLDGKLSKQPFLLSSSLSCSPLELLHSDAWGPAPDKSINGHRYYVSFVDDFSRYTWIFPMCYKSDVFSIFSQFLPFAKNLLSSRLNVFRSDGGGEYLSND
Query: LKNLFANQGILHQKSCPYTPEQNGIDERKHRHIVNMALSLLSKSSIPMRFWFFAFATAEYLINRLPSPNLAHKSPFELLFKKPPDYTSLHVFGCACYHLL
L++ + GI H S P+TPE NG+ ERKHRHIV M L+LLS +S+P +W +AF+ A YLINRLP+P L +SPF+ LF +PP+Y L VFGCACY L
Subjt: LKNLFANQGILHQKSCPYTPEQNGIDERKHRHIVNMALSLLSKSSIPMRFWFFAFATAEYLINRLPSPNLAHKSPFELLFKKPPDYTSLHVFGCACYHLL
Query: RPY
RPY
Subjt: RPY
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