CuGenDBv2

Gene ID	Lag0031661
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Integrase core domain containing protein
Genome location	chr11:11547898..11548215
RNA-Seq Expression	Lag0031661
Synteny	Lag0031661
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022148963.1 uncharacterized protein LOC111017501 [Momordica charantia]

2.4e-39

80.77

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Query:  MTPEVATQVMWFENAQDLWAAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMTDYLRTMKSHEDNLGQAGSPIVVRSLVSQELLGLDEEYNLVVAMVQGKA
        MTPEVATQVM +ENA DLWAAIQ+LFGVQS+AEEDYLRQVFQQ RKGSLKMTD+LR MKSH DNLGQAGSP+  RSL+SQ LLGLDEEYN VVA +QGK 
Subjt:  MTPEVATQVMWFENAQDLWAAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMTDYLRTMKSHEDNLGQAGSPIVVRSLVSQELLGLDEEYNLVVAMVQGKA

Query:  GVTW
        G++W
Subjt:  GVTW

XP_038896600.1 uncharacterized protein LOC120084860 [Benincasa hispida]

4.6e-30

64.42

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Query:  MTPEVATQVMWFENAQDLWAAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMTDYLRTMKSHEDNLGQAGSPIVVRSLVSQELLGLDEEYNLVVAMVQGKA
        M  +VA Q+M +E A++LW AIQ+LFGVQSRAEEDYLRQ+FQQ RKG  KM+ YL+ MK H DNL Q  SP+  R+L+SQ LLGLDEEYNLVV  +QGK 
Subjt:  MTPEVATQVMWFENAQDLWAAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMTDYLRTMKSHEDNLGQAGSPIVVRSLVSQELLGLDEEYNLVVAMVQGKA

Query:  GVTW
        G++W
Subjt:  GVTW

XP_038904321.1 uncharacterized protein LOC120090675 [Benincasa hispida]

4.1e-31

68.27

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Query:  MTPEVATQVMWFENAQDLWAAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMTDYLRTMKSHEDNLGQAGSPIVVRSLVSQELLGLDEEYNLVVAMVQGKA
        MTP++A QVM FE A+DLW  IQ LFG+QSRAEEDYLR VFQ  RKG+LKM DYLRTMK + DNL QAGSP+  R+LV Q LLGLDEEYN +VA +QG+A
Subjt:  MTPEVATQVMWFENAQDLWAAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMTDYLRTMKSHEDNLGQAGSPIVVRSLVSQELLGLDEEYNLVVAMVQGKA

Query:  GVTW
         ++W
Subjt:  GVTW

XP_038905161.1 uncharacterized protein LOC120091275 isoform X1 [Benincasa hispida]

4.6e-30

67.31

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Query:  MTPEVATQVMWFENAQDLWAAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMTDYLRTMKSHEDNLGQAGSPIVVRSLVSQELLGLDEEYNLVVAMVQGKA
        MTPEVA QVM  E A+DLW +I  LFGVQSR EEDYLR VFQ  RKG+LKM +YL+TMK + DNL QAGSP+  R+LVSQ LLGLDEEYN +VAM+QG+ 
Subjt:  MTPEVATQVMWFENAQDLWAAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMTDYLRTMKSHEDNLGQAGSPIVVRSLVSQELLGLDEEYNLVVAMVQGKA

Query:  GVTW
         ++W
Subjt:  GVTW

XP_038905164.1 uncharacterized protein LOC120091275 isoform X4 [Benincasa hispida]

4.6e-30

67.31

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Query:  MTPEVATQVMWFENAQDLWAAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMTDYLRTMKSHEDNLGQAGSPIVVRSLVSQELLGLDEEYNLVVAMVQGKA
        MTPEVA QVM  E A+DLW +I  LFGVQSR EEDYLR VFQ  RKG+LKM +YL+TMK + DNL QAGSP+  R+LVSQ LLGLDEEYN +VAM+QG+ 
Subjt:  MTPEVATQVMWFENAQDLWAAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMTDYLRTMKSHEDNLGQAGSPIVVRSLVSQELLGLDEEYNLVVAMVQGKA

Query:  GVTW
         ++W
Subjt:  GVTW

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LXB7 Uncharacterized protein

3.9e-27

59.62

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Query:  MTPEVATQVMWFENAQDLWAAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMTDYLRTMKSHEDNLGQAGSPIVVRSLVSQELLGLDEEYNLVVAMVQGKA
        +TPEV  Q++ F NA+D+W A  D FGV+SRAEED+LRQ FQ  RKG+  M DYLR MK++ DNLGQA SPI  R+L+SQ LLGLDE YN V+ ++QGK 
Subjt:  MTPEVATQVMWFENAQDLWAAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMTDYLRTMKSHEDNLGQAGSPIVVRSLVSQELLGLDEEYNLVVAMVQGKA

Query:  GVTW
         ++W
Subjt:  GVTW

A0A5A7SIT7 Uncharacterized protein

5.5e-29

61.54

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Query:  MTPEVATQVMWFENAQDLWAAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMTDYLRTMKSHEDNLGQAGSPIVVRSLVSQELLGLDEEYNLVVAMVQGKA
        MTP+VA Q+M F N +DLW A QD FGVQSRAEED+LRQ+ Q  RKG+ KM +YL  MK++ DNLGQ GSP+  R+L+SQ LLGLDE YNLV+ ++QGK 
Subjt:  MTPEVATQVMWFENAQDLWAAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMTDYLRTMKSHEDNLGQAGSPIVVRSLVSQELLGLDEEYNLVVAMVQGKA

Query:  GVTW
         ++W
Subjt:  GVTW

A0A5D3E3L7 Uncharacterized protein

5.1e-27

60.58

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Query:  MTPEVATQVMWFENAQDLWAAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMTDYLRTMKSHEDNLGQAGSPIVVRSLVSQELLGLDEEYNLVVAMVQGKA
        M P+VA Q+M F  A+DLW AIQ+LFG++SRAEE +LR  FQ  R+G+ KM DYLR MK + DNLGQAGSP+  R L+SQ LLGLDE YN V A++QGK 
Subjt:  MTPEVATQVMWFENAQDLWAAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMTDYLRTMKSHEDNLGQAGSPIVVRSLVSQELLGLDEEYNLVVAMVQGKA

Query:  GVTW
         ++W
Subjt:  GVTW

A0A6J1D5J0 uncharacterized protein LOC111017501

1.2e-39

80.77

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Query:  MTPEVATQVMWFENAQDLWAAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMTDYLRTMKSHEDNLGQAGSPIVVRSLVSQELLGLDEEYNLVVAMVQGKA
        MTPEVATQVM +ENA DLWAAIQ+LFGVQS+AEEDYLRQVFQQ RKGSLKMTD+LR MKSH DNLGQAGSP+  RSL+SQ LLGLDEEYN VVA +QGK 
Subjt:  MTPEVATQVMWFENAQDLWAAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMTDYLRTMKSHEDNLGQAGSPIVVRSLVSQELLGLDEEYNLVVAMVQGKA

Query:  GVTW
        G++W
Subjt:  GVTW

A0A6J1DCW4 uncharacterized protein LOC111019598

2.1e-28

62.86

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Query:  MTPEVATQVMWFENAQDLWAAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMTDYLRTMKSHEDNLGQAGSPIVVRSLVSQELLGLDEEYNLVVAMVQGKA
        M  +VA QVM F  +++LW A+Q+LFGVQSRAE DYL+QVFQQ  KGSL+M +YL+ MKSH DNL  AGS + VR LVSQ L GLDEEYN +V  VQGK 
Subjt:  MTPEVATQVMWFENAQDLWAAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMTDYLRTMKSHEDNLGQAGSPIVVRSLVSQELLGLDEEYNLVVAMVQGKA

Query:  GVTWS
         ++WS
Subjt:  GVTWS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G48050.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162)

2.1e-04

29.07

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Query:  AQDLWAAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMTDYLRTMKSHEDNLGQAGSPIVVRSLVSQELLGLDEEYNLVVAMVQGKA
        A+DLW ++++LF     A         +      L + +Y + +KS  D L    SPI  R LV   L GL E+Y+ ++ +++ K+
Subjt:  AQDLWAAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMTDYLRTMKSHEDNLGQAGSPIVVRSLVSQELLGLDEEYNLVVAMVQGKA

Sequences

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CDS sequence

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ATGACCCCTGAAGTTGCTACTCAGGTAATGTGGTTCGAAAATGCTCAAGATCTTTGGGCAGCTATACAAGACTTGTTTGGAGTTCAATCTCGTGCCGAGGAGGACTATCT
TCGCCAGGTATTTCAACAGTGTAGGAAAGGAAGTTTGAAAATGACTGACTATTTACGTACAATGAAGAGTCATGAAGATAATCTAGGTCAGGCTGGAAGTCCGATTGTTG
TTCGGTCTCTGGTGTCACAAGAACTCTTGGGCTTAGATGAAGAGTACAATCTTGTGGTTGCAATGGTTCAAGGGAAAGCTGGTGTTACTTGGTCTTAG

mRNA sequence

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Protein sequence

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MTPEVATQVMWFENAQDLWAAIQDLFGVQSRAEEDYLRQVFQQCRKGSLKMTDYLRTMKSHEDNLGQAGSPIVVRSLVSQELLGLDEEYNLVVAMVQGKAGVTWS

Lag0031661 (gene) of Sponge gourd (AG-4) v1 genome