; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0031679 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031679
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr11:11806531..11807175
RNA-Seq ExpressionLag0031679
SyntenyLag0031679
Gene Ontology termsGO:0071897 - DNA biosynthetic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0034061 - DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143495.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia]2.4e-4955.9Show/hide
Query:  LLSHHFKHSAGAVPSSLHQKLKISIGRSLVIVSGQEDILVSRPASMPYIVAAEEAFESSFQTFEVASVTTLYGESKKYKSRSSVMTFKESNSRLDDVLSL
        LL   + HSAGAVPS+LHQK+K ++ + LVI+SGQEDILVSR ASMPY+ AAEEAFESSFQ+FE+A+ TTL+G+  + K R     FK  N  LD +L +
Subjt:  LLSHHFKHSAGAVPSSLHQKLKISIGRSLVIVSGQEDILVSRPASMPYIVAAEEAFESSFQTFEVASVTTLYGESKKYKSRSSVMTFKESNSRLDDVLSL

Query:  SKNTKRFGLGYQPNKADMIRVQKREKERRLTRFESREPEYGEKVIPHLYHSFESAGII---CPGDFAVAIVTKE-EEMGPWVYPCLENFELNNWS
        +KNTK+FGLGY+P++ D+IRV+  EK +RL+RFE+ E +Y  + +P L HSF SAG I     G   VA VT+E E++ P+VYPC + FEL+NWS
Subjt:  SKNTKRFGLGYQPNKADMIRVQKREKERRLTRFESREPEYGEKVIPHLYHSFESAGII---CPGDFAVAIVTKE-EEMGPWVYPCLENFELNNWS

XP_022147181.1 uncharacterized protein LOC111016192 [Momordica charantia]2.7e-4555.14Show/hide
Query:  QKLKISIGRSLVIVSGQEDILVSRPASMPYIVAAEEAFESSFQTFEVASVTTLYGESKKYKSRSSVMTFKESNSRLDDVLSLSKNTKRFGLGYQPNKADM
        +KL + + + LVI+ GQEDILVSR ASMPY+ AAEEAFESSFQ+FE+A+ TTL+G+  + K R     FK  N+ LD +L ++KNTK+FGLGY+P++ D+
Subjt:  QKLKISIGRSLVIVSGQEDILVSRPASMPYIVAAEEAFESSFQTFEVASVTTLYGESKKYKSRSSVMTFKESNSRLDDVLSLSKNTKRFGLGYQPNKADM

Query:  IRVQKREKERRLTRFESREPEYGEKVIPHLYHSFESAGII---CPGDFAVAIVTKE-EEMGPWVYPCLENFELNNWSTVELPSFV
        IRV   EK +RL+RFE+ E +Y  + +P L HSF SAGII         VA VT+E E++GP+VYPC + FEL+NWS +ELPSFV
Subjt:  IRVQKREKERRLTRFESREPEYGEKVIPHLYHSFESAGII---CPGDFAVAIVTKE-EEMGPWVYPCLENFELNNWSTVELPSFV

XP_022147189.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]1.3e-5054.68Show/hide
Query:  LLSHHFKHSAGAVPSSLHQKLKISIGRSLVIVSGQEDILVSRPASMPYIVAAEEAFESSFQTFEVASVTTLYGESKKYKSRSSVMTFKESNSRLDDVLSL
        LL   + HSAGAVPS+LHQK+K ++ + LVI+SGQEDILVSR ASM Y+  AEEAFESSFQ+FE+A+ TTL+G+  + K R     FK  N  LD +L +
Subjt:  LLSHHFKHSAGAVPSSLHQKLKISIGRSLVIVSGQEDILVSRPASMPYIVAAEEAFESSFQTFEVASVTTLYGESKKYKSRSSVMTFKESNSRLDDVLSL

Query:  SKNTKRFGLGYQPNKADMIRVQKREKERRLTRFESREPEYGEKVIPHLYHSFESAGII---CPGDFAVAIVTKE-EEMGPWVYPCLENFELNNWSTVELP
        +KNTK+FGLGY+P++ D+IRV+  EK +RL+RFE+ E +Y  +++P L HSF SAG I         VA VT+E E++GP+VY C + FEL+NWS ++LP
Subjt:  SKNTKRFGLGYQPNKADMIRVQKREKERRLTRFESREPEYGEKVIPHLYHSFESAGII---CPGDFAVAIVTKE-EEMGPWVYPCLENFELNNWSTVELP

Query:  SFV
        SFV
Subjt:  SFV

XP_022150030.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111018303 [Momordica charantia]2.0e-4853.33Show/hide
Query:  LLSHHFKHSAGAVPSSLHQKLKISIGRSLVIVSGQEDILVSRPASMPYIVAAEEAFESSFQTFEVASVTTLYGESKKYKSRSSVMTFKESNSRLDDVLSL
        LL   + HSAGAVPS+LHQK+K ++ + LVI+SGQEDILVSR ASMPY+ AAEEAFESSFQ+FE+A+ TTL+G+  + K R     FK +N  LD +L +
Subjt:  LLSHHFKHSAGAVPSSLHQKLKISIGRSLVIVSGQEDILVSRPASMPYIVAAEEAFESSFQTFEVASVTTLYGESKKYKSRSSVMTFKESNSRLDDVLSL

Query:  SKNTKRFGLGYQPNKADMIRVQKREKERRLTRFESREPEYGEKVIPHLYHSFESAGII----CPGDFAVAIVTKEEEMGPWVYPCLENFELNNWS
        +KNT+RFGLGY+PN+ D+IRV+  EK +RL+RFE+ E +Y  + +P L HS  SAG I         A A+  + E++ P+VYPC + F+L+NWS
Subjt:  SKNTKRFGLGYQPNKADMIRVQKREKERRLTRFESREPEYGEKVIPHLYHSFESAGII----CPGDFAVAIVTKEEEMGPWVYPCLENFELNNWS

XP_022155744.1 uncharacterized protein LOC111022791 [Momordica charantia]7.3e-5156.63Show/hide
Query:  HSAGAVPSSLHQKLKISIGRSLVIVSGQEDILVSRPASMPYIVAAEEAFESSFQTFEVASVTTLYGESKKYKSRSSVMTFKESNSRLDDVLSLSKNTKRF
        HSAGAVPS+LHQK+K +I + LVI+SGQEDILVSR ASMPY+ A EEAFESSFQ+FE+ + TTL+G+  + KSR     FK  N  LD +L ++KNTK+F
Subjt:  HSAGAVPSSLHQKLKISIGRSLVIVSGQEDILVSRPASMPYIVAAEEAFESSFQTFEVASVTTLYGESKKYKSRSSVMTFKESNSRLDDVLSLSKNTKRF

Query:  GLGYQPNKADMIRVQKREKERRLTRFESREPEYGEKVIPHLYHSFESAGII---CPGDFAVAIVTKE-EEMGPWVYPCLENFELNNWSTVELPSFV
        GLGY+ ++ D+IRV+  EK +RL+RFE+ E +Y  +++P L HSF SAG I         VA VT+E E++GP+VY C + FEL+NWS +ELPSFV
Subjt:  GLGYQPNKADMIRVQKREKERRLTRFESREPEYGEKVIPHLYHSFESAGII---CPGDFAVAIVTKE-EEMGPWVYPCLENFELNNWSTVELPSFV

TrEMBL top hitse value%identityAlignment
A0A6J1CNY7 Ribonuclease H1.1e-4955.9Show/hide
Query:  LLSHHFKHSAGAVPSSLHQKLKISIGRSLVIVSGQEDILVSRPASMPYIVAAEEAFESSFQTFEVASVTTLYGESKKYKSRSSVMTFKESNSRLDDVLSL
        LL   + HSAGAVPS+LHQK+K ++ + LVI+SGQEDILVSR ASMPY+ AAEEAFESSFQ+FE+A+ TTL+G+  + K R     FK  N  LD +L +
Subjt:  LLSHHFKHSAGAVPSSLHQKLKISIGRSLVIVSGQEDILVSRPASMPYIVAAEEAFESSFQTFEVASVTTLYGESKKYKSRSSVMTFKESNSRLDDVLSL

Query:  SKNTKRFGLGYQPNKADMIRVQKREKERRLTRFESREPEYGEKVIPHLYHSFESAGII---CPGDFAVAIVTKE-EEMGPWVYPCLENFELNNWS
        +KNTK+FGLGY+P++ D+IRV+  EK +RL+RFE+ E +Y  + +P L HSF SAG I     G   VA VT+E E++ P+VYPC + FEL+NWS
Subjt:  SKNTKRFGLGYQPNKADMIRVQKREKERRLTRFESREPEYGEKVIPHLYHSFESAGII---CPGDFAVAIVTKE-EEMGPWVYPCLENFELNNWS

A0A6J1D099 Ribonuclease H6.1e-5154.68Show/hide
Query:  LLSHHFKHSAGAVPSSLHQKLKISIGRSLVIVSGQEDILVSRPASMPYIVAAEEAFESSFQTFEVASVTTLYGESKKYKSRSSVMTFKESNSRLDDVLSL
        LL   + HSAGAVPS+LHQK+K ++ + LVI+SGQEDILVSR ASM Y+  AEEAFESSFQ+FE+A+ TTL+G+  + K R     FK  N  LD +L +
Subjt:  LLSHHFKHSAGAVPSSLHQKLKISIGRSLVIVSGQEDILVSRPASMPYIVAAEEAFESSFQTFEVASVTTLYGESKKYKSRSSVMTFKESNSRLDDVLSL

Query:  SKNTKRFGLGYQPNKADMIRVQKREKERRLTRFESREPEYGEKVIPHLYHSFESAGII---CPGDFAVAIVTKE-EEMGPWVYPCLENFELNNWSTVELP
        +KNTK+FGLGY+P++ D+IRV+  EK +RL+RFE+ E +Y  +++P L HSF SAG I         VA VT+E E++GP+VY C + FEL+NWS ++LP
Subjt:  SKNTKRFGLGYQPNKADMIRVQKREKERRLTRFESREPEYGEKVIPHLYHSFESAGII---CPGDFAVAIVTKE-EEMGPWVYPCLENFELNNWSTVELP

Query:  SFV
        SFV
Subjt:  SFV

A0A6J1D1K4 uncharacterized protein LOC1110161921.3e-4555.14Show/hide
Query:  QKLKISIGRSLVIVSGQEDILVSRPASMPYIVAAEEAFESSFQTFEVASVTTLYGESKKYKSRSSVMTFKESNSRLDDVLSLSKNTKRFGLGYQPNKADM
        +KL + + + LVI+ GQEDILVSR ASMPY+ AAEEAFESSFQ+FE+A+ TTL+G+  + K R     FK  N+ LD +L ++KNTK+FGLGY+P++ D+
Subjt:  QKLKISIGRSLVIVSGQEDILVSRPASMPYIVAAEEAFESSFQTFEVASVTTLYGESKKYKSRSSVMTFKESNSRLDDVLSLSKNTKRFGLGYQPNKADM

Query:  IRVQKREKERRLTRFESREPEYGEKVIPHLYHSFESAGII---CPGDFAVAIVTKE-EEMGPWVYPCLENFELNNWSTVELPSFV
        IRV   EK +RL+RFE+ E +Y  + +P L HSF SAGII         VA VT+E E++GP+VYPC + FEL+NWS +ELPSFV
Subjt:  IRVQKREKERRLTRFESREPEYGEKVIPHLYHSFESAGII---CPGDFAVAIVTKE-EEMGPWVYPCLENFELNNWSTVELPSFV

A0A6J1D7C7 Ribonuclease H9.7e-4953.33Show/hide
Query:  LLSHHFKHSAGAVPSSLHQKLKISIGRSLVIVSGQEDILVSRPASMPYIVAAEEAFESSFQTFEVASVTTLYGESKKYKSRSSVMTFKESNSRLDDVLSL
        LL   + HSAGAVPS+LHQK+K ++ + LVI+SGQEDILVSR ASMPY+ AAEEAFESSFQ+FE+A+ TTL+G+  + K R     FK +N  LD +L +
Subjt:  LLSHHFKHSAGAVPSSLHQKLKISIGRSLVIVSGQEDILVSRPASMPYIVAAEEAFESSFQTFEVASVTTLYGESKKYKSRSSVMTFKESNSRLDDVLSL

Query:  SKNTKRFGLGYQPNKADMIRVQKREKERRLTRFESREPEYGEKVIPHLYHSFESAGII----CPGDFAVAIVTKEEEMGPWVYPCLENFELNNWS
        +KNT+RFGLGY+PN+ D+IRV+  EK +RL+RFE+ E +Y  + +P L HS  SAG I         A A+  + E++ P+VYPC + F+L+NWS
Subjt:  SKNTKRFGLGYQPNKADMIRVQKREKERRLTRFESREPEYGEKVIPHLYHSFESAGII----CPGDFAVAIVTKEEEMGPWVYPCLENFELNNWS

A0A6J1DR66 uncharacterized protein LOC1110227913.6e-5156.63Show/hide
Query:  HSAGAVPSSLHQKLKISIGRSLVIVSGQEDILVSRPASMPYIVAAEEAFESSFQTFEVASVTTLYGESKKYKSRSSVMTFKESNSRLDDVLSLSKNTKRF
        HSAGAVPS+LHQK+K +I + LVI+SGQEDILVSR ASMPY+ A EEAFESSFQ+FE+ + TTL+G+  + KSR     FK  N  LD +L ++KNTK+F
Subjt:  HSAGAVPSSLHQKLKISIGRSLVIVSGQEDILVSRPASMPYIVAAEEAFESSFQTFEVASVTTLYGESKKYKSRSSVMTFKESNSRLDDVLSLSKNTKRF

Query:  GLGYQPNKADMIRVQKREKERRLTRFESREPEYGEKVIPHLYHSFESAGII---CPGDFAVAIVTKE-EEMGPWVYPCLENFELNNWSTVELPSFV
        GLGY+ ++ D+IRV+  EK +RL+RFE+ E +Y  +++P L HSF SAG I         VA VT+E E++GP+VY C + FEL+NWS +ELPSFV
Subjt:  GLGYQPNKADMIRVQKREKERRLTRFESREPEYGEKVIPHLYHSFESAGII---CPGDFAVAIVTKE-EEMGPWVYPCLENFELNNWSTVELPSFV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTTTCAAAACGAAAAACAGGGGAAGCTTTTGAGTCATCATTTCAAACATTCTGCAGGAGCTGTCCCATCATCGCTGCACCAGAAACTCAAAATTTCAATTGGAAG
GAGCCTAGTAATTGTATCTGGTCAAGAGGATATCTTGGTTTCTAGGCCAGCTTCAATGCCATATATTGTTGCAGCAGAGGAAGCTTTTGAGTCATCATTTCAAACATTTG
AGGTAGCAAGTGTCACGACTCTATATGGGGAAAGCAAGAAATATAAATCTCGATCTTCAGTCATGACGTTCAAAGAAAGCAACAGTCGTTTAGATGATGTTTTAAGCCTA
TCGAAAAATACAAAAAGATTTGGGCTTGGGTATCAGCCGAATAAAGCAGACATGATCAGGGTACAAAAGCGAGAAAAAGAGAGGCGTTTGACCAGATTTGAAAGTCGCGA
ACCAGAATATGGAGAAAAAGTCATTCCTCATCTCTACCACTCGTTTGAAAGTGCTGGTATAATTTGTCCAGGAGATTTTGCAGTTGCAATAGTGACTAAAGAGGAAGAAA
TGGGTCCATGGGTCTACCCGTGCCTAGAAAACTTCGAGCTCAACAATTGGAGTACTGTTGAATTACCGTCATTTGTTGTTAAGATGTCAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTCTTTCAAAACGAAAAACAGGGGAAGCTTTTGAGTCATCATTTCAAACATTCTGCAGGAGCTGTCCCATCATCGCTGCACCAGAAACTCAAAATTTCAATTGGAAG
GAGCCTAGTAATTGTATCTGGTCAAGAGGATATCTTGGTTTCTAGGCCAGCTTCAATGCCATATATTGTTGCAGCAGAGGAAGCTTTTGAGTCATCATTTCAAACATTTG
AGGTAGCAAGTGTCACGACTCTATATGGGGAAAGCAAGAAATATAAATCTCGATCTTCAGTCATGACGTTCAAAGAAAGCAACAGTCGTTTAGATGATGTTTTAAGCCTA
TCGAAAAATACAAAAAGATTTGGGCTTGGGTATCAGCCGAATAAAGCAGACATGATCAGGGTACAAAAGCGAGAAAAAGAGAGGCGTTTGACCAGATTTGAAAGTCGCGA
ACCAGAATATGGAGAAAAAGTCATTCCTCATCTCTACCACTCGTTTGAAAGTGCTGGTATAATTTGTCCAGGAGATTTTGCAGTTGCAATAGTGACTAAAGAGGAAGAAA
TGGGTCCATGGGTCTACCCGTGCCTAGAAAACTTCGAGCTCAACAATTGGAGTACTGTTGAATTACCGTCATTTGTTGTTAAGATGTCAAAGTAA
Protein sequenceShow/hide protein sequence
MLFQNEKQGKLLSHHFKHSAGAVPSSLHQKLKISIGRSLVIVSGQEDILVSRPASMPYIVAAEEAFESSFQTFEVASVTTLYGESKKYKSRSSVMTFKESNSRLDDVLSL
SKNTKRFGLGYQPNKADMIRVQKREKERRLTRFESREPEYGEKVIPHLYHSFESAGIICPGDFAVAIVTKEEEMGPWVYPCLENFELNNWSTVELPSFVVKMSK