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Lag0031683 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031683
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr11:11866542..11867983
RNA-Seq ExpressionLag0031683
SyntenyLag0031683
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]5.5e-3040.31Show/hide
Query:  GPPGGGSSRKRKAIAREAKFEPEYRGMYSVHLAKAHTRLKFTKAEATSIHQPHNDALVVTLMVANEKIHRILIDRGSSANVFSLIAFK------------
        GP    S RKRKA  REA+       +Y  ++A    +++F++ EAT +  PHNDALV+TL +AN K+HRIL+D GSS ++ SL A+K            
Subjt:  GPPGGGSSRKRKAIAREAKFEPEYRGMYSVHLAKAHTRLKFTKAEATSIHQPHNDALVVTLMVANEKIHRILIDRGSSANVFSLIAFK------------

Query:  ----------------------------NSVTKTINFLVVDCISAYNAILRRPTLHEMKVIASTYHQLLKFLTQNGVGVAKGEQKASRECYWTALK
                                     S+T+ ++FLVVD  S+YN IL RPT+H ++ I STYHQ +KF T  GVG  KGEQ+ SRECY+T+++
Subjt:  ----------------------------NSVTKTINFLVVDCISAYNAILRRPTLHEMKVIASTYHQLLKFLTQNGVGVAKGEQKASRECYWTALK

XP_022150028.1 uncharacterized protein LOC111018300 [Momordica charantia]4.8e-3440.18Show/hide
Query:  PRPTKDGRDKEESP-REIKTIFGGPPGGGSSRKRKAIAREAKFEPEYRGMYSVHLAKAHTRLKFTKAEATSIHQPHNDALVVTLMVANEKIHRILIDRGS
        P+ T++G +  +SP REI+TI GGP      RKRKA  RE +       +Y   +AK   +++F++ EAT +  PHND LV+TL +AN K+HRIL+D GS
Subjt:  PRPTKDGRDKEESP-REIKTIFGGPPGGGSSRKRKAIAREAKFEPEYRGMYSVHLAKAHTRLKFTKAEATSIHQPHNDALVVTLMVANEKIHRILIDRGS

Query:  SANVFSLIAFK----------------------------------------NSVTKTINFLVVDCISAYNAILRRPTLHEMKVIASTYHQLLKFLTQNGV
        SA++ SL A+K                                         S+T  ++FLV+D  S+YNAIL RPT+H +K I STYHQ + F T  G+
Subjt:  SANVFSLIAFK----------------------------------------NSVTKTINFLVVDCISAYNAILRRPTLHEMKVIASTYHQLLKFLTQNGV

Query:  GVAKGEQKASRECYWTALK
        G  K EQ+ SRECY+T++K
Subjt:  GVAKGEQKASRECYWTALK

XP_022155902.1 uncharacterized protein LOC111022905 [Momordica charantia]7.4e-3542.65Show/hide
Query:  PRPTKDGRDKEESPREIKTIFGGPPGGGSSRKRKAIAREAKFEPEYRGMYSVHLAKAHTRLKFTKAEATSIHQPHNDALVVTLMVANEKIHRILIDRGSS
        P+ T++G + +   REI+TI GGP    S RK K   REA+    +  +Y  ++A     ++F+K EAT +  PHNDALV+TL +AN K+HRIL+D G+S
Subjt:  PRPTKDGRDKEESPREIKTIFGGPPGGGSSRKRKAIAREAKFEPEYRGMYSVHLAKAHTRLKFTKAEATSIHQPHNDALVVTLMVANEKIHRILIDRGSS

Query:  ANVFSLIAFK---------------------------------NSVTKTINFLVVDCISAYNAILRRPTLHEMKVIASTYHQLLKFLTQNGVGVAKGEQK
        A++ S  A+K                                  SVTK + FLVVD  S+YNAIL R T+H +K I STYHQ +KF T  GVG  KGEQ+
Subjt:  ANVFSLIAFK---------------------------------NSVTKTINFLVVDCISAYNAILRRPTLHEMKVIASTYHQLLKFLTQNGVGVAKGEQK

Query:  ASRECYWTALK
         SRECY+T++K
Subjt:  ASRECYWTALK

XP_022158093.1 uncharacterized protein LOC111024662 [Momordica charantia]2.4e-3339.27Show/hide
Query:  PRPTKDGRDKEESP-REIKTIFGGPPGGGSSRKRKAIAREAKFEPEYRGMYSVHLAKAHTRLKFTKAEATSIHQPHNDALVVTLMVANEKIHRILIDRGS
        P+ T +  + ++SP +EI+TIFGGP      +KRKA  +EA+  P Y  +Y        +++KF++ E T +  PHNDALV+TL + N K+HRIL+D GS
Subjt:  PRPTKDGRDKEESP-REIKTIFGGPPGGGSSRKRKAIAREAKFEPEYRGMYSVHLAKAHTRLKFTKAEATSIHQPHNDALVVTLMVANEKIHRILIDRGS

Query:  SANVFSLIAFK----------------------------------------NSVTKTINFLVVDCISAYNAILRRPTLHEMKVIASTYHQLLKFLTQNGV
        S  + SL A+K                                         ++TK + FLVVD  S+YNAIL RPT+H +K I STYH+ LKF T  G+
Subjt:  SANVFSLIAFK----------------------------------------NSVTKTINFLVVDCISAYNAILRRPTLHEMKVIASTYHQLLKFLTQNGV

Query:  GVAKGEQKASRECYWTALK
           KGEQ+ S ECY+T+L+
Subjt:  GVAKGEQKASRECYWTALK

XP_022158687.1 uncharacterized protein LOC111025147 [Momordica charantia]7.2e-3041.62Show/hide
Query:  GGPPGGGSSRKRKAIAREAKFEPEYRGMYSVHLAKAHTRLKFTKAEATSIHQPHNDALVVTLMVANEKIHRILIDRGSSANVFSLIAFK-----------
        GGP    S RKRKA  REA+       +Y  ++A     ++F++ EAT +  PHNDALV+TL +AN K+HRIL+D GSSA++ S   +K           
Subjt:  GGPPGGGSSRKRKAIAREAKFEPEYRGMYSVHLAKAHTRLKFTKAEATSIHQPHNDALVVTLMVANEKIHRILIDRGSSANVFSLIAFK-----------

Query:  -----------------------------NSVTKTINFLVVDCISAYNAILRRPTLHEMKVIASTYHQLLKFLTQNGVGVAKGEQKASRECYWTALK
                                      SVTK ++FLVVD  S+YNAIL R T+H +K I STYHQ +KF T  GVG  KGEQ+ SRECY+T+++
Subjt:  -----------------------------NSVTKTINFLVVDCISAYNAILRRPTLHEMKVIASTYHQLLKFLTQNGVGVAKGEQKASRECYWTALK

TrEMBL top hitse value%identityAlignment
A0A6J1CZ14 uncharacterized protein LOC1110159012.7e-3040.31Show/hide
Query:  GPPGGGSSRKRKAIAREAKFEPEYRGMYSVHLAKAHTRLKFTKAEATSIHQPHNDALVVTLMVANEKIHRILIDRGSSANVFSLIAFK------------
        GP    S RKRKA  REA+       +Y  ++A    +++F++ EAT +  PHNDALV+TL +AN K+HRIL+D GSS ++ SL A+K            
Subjt:  GPPGGGSSRKRKAIAREAKFEPEYRGMYSVHLAKAHTRLKFTKAEATSIHQPHNDALVVTLMVANEKIHRILIDRGSSANVFSLIAFK------------

Query:  ----------------------------NSVTKTINFLVVDCISAYNAILRRPTLHEMKVIASTYHQLLKFLTQNGVGVAKGEQKASRECYWTALK
                                     S+T+ ++FLVVD  S+YN IL RPT+H ++ I STYHQ +KF T  GVG  KGEQ+ SRECY+T+++
Subjt:  ----------------------------NSVTKTINFLVVDCISAYNAILRRPTLHEMKVIASTYHQLLKFLTQNGVGVAKGEQKASRECYWTALK

A0A6J1D8C9 uncharacterized protein LOC1110183002.3e-3440.18Show/hide
Query:  PRPTKDGRDKEESP-REIKTIFGGPPGGGSSRKRKAIAREAKFEPEYRGMYSVHLAKAHTRLKFTKAEATSIHQPHNDALVVTLMVANEKIHRILIDRGS
        P+ T++G +  +SP REI+TI GGP      RKRKA  RE +       +Y   +AK   +++F++ EAT +  PHND LV+TL +AN K+HRIL+D GS
Subjt:  PRPTKDGRDKEESP-REIKTIFGGPPGGGSSRKRKAIAREAKFEPEYRGMYSVHLAKAHTRLKFTKAEATSIHQPHNDALVVTLMVANEKIHRILIDRGS

Query:  SANVFSLIAFK----------------------------------------NSVTKTINFLVVDCISAYNAILRRPTLHEMKVIASTYHQLLKFLTQNGV
        SA++ SL A+K                                         S+T  ++FLV+D  S+YNAIL RPT+H +K I STYHQ + F T  G+
Subjt:  SANVFSLIAFK----------------------------------------NSVTKTINFLVVDCISAYNAILRRPTLHEMKVIASTYHQLLKFLTQNGV

Query:  GVAKGEQKASRECYWTALK
        G  K EQ+ SRECY+T++K
Subjt:  GVAKGEQKASRECYWTALK

A0A6J1DQL9 uncharacterized protein LOC1110229053.6e-3542.65Show/hide
Query:  PRPTKDGRDKEESPREIKTIFGGPPGGGSSRKRKAIAREAKFEPEYRGMYSVHLAKAHTRLKFTKAEATSIHQPHNDALVVTLMVANEKIHRILIDRGSS
        P+ T++G + +   REI+TI GGP    S RK K   REA+    +  +Y  ++A     ++F+K EAT +  PHNDALV+TL +AN K+HRIL+D G+S
Subjt:  PRPTKDGRDKEESPREIKTIFGGPPGGGSSRKRKAIAREAKFEPEYRGMYSVHLAKAHTRLKFTKAEATSIHQPHNDALVVTLMVANEKIHRILIDRGSS

Query:  ANVFSLIAFK---------------------------------NSVTKTINFLVVDCISAYNAILRRPTLHEMKVIASTYHQLLKFLTQNGVGVAKGEQK
        A++ S  A+K                                  SVTK + FLVVD  S+YNAIL R T+H +K I STYHQ +KF T  GVG  KGEQ+
Subjt:  ANVFSLIAFK---------------------------------NSVTKTINFLVVDCISAYNAILRRPTLHEMKVIASTYHQLLKFLTQNGVGVAKGEQK

Query:  ASRECYWTALK
         SRECY+T++K
Subjt:  ASRECYWTALK

A0A6J1DQY2 uncharacterized protein LOC1110223213.5e-3041.12Show/hide
Query:  GPPGGGSSRKRKAIAREAKFEPEYRGMYSVHLAKAHTRLKFTKAEATSIHQPHNDALVVTLMVANEKIHRILIDRGSSANVFSLIAFK------------
        GP    S RKRKA  REA+   +   +Y  ++      ++F++ EAT +  PHNDALV+TL +AN K+HRIL+D GSSA++ S  A+K            
Subjt:  GPPGGGSSRKRKAIAREAKFEPEYRGMYSVHLAKAHTRLKFTKAEATSIHQPHNDALVVTLMVANEKIHRILIDRGSSANVFSLIAFK------------

Query:  ----------------------------NSVTKTINFLVVDCISAYNAILRRPTLHEMKVIASTYHQLLKFLTQNGVGVAKGEQKASRECYWTALKE
                                     SVTK ++FLVV+  S+YNAIL RPT+H +K I STYHQ  KF T  GVG  KGEQ+ SRECY T++++
Subjt:  ----------------------------NSVTKTINFLVVDCISAYNAILRRPTLHEMKVIASTYHQLLKFLTQNGVGVAKGEQKASRECYWTALKE

A0A6J1DV51 uncharacterized protein LOC1110246621.2e-3339.27Show/hide
Query:  PRPTKDGRDKEESP-REIKTIFGGPPGGGSSRKRKAIAREAKFEPEYRGMYSVHLAKAHTRLKFTKAEATSIHQPHNDALVVTLMVANEKIHRILIDRGS
        P+ T +  + ++SP +EI+TIFGGP      +KRKA  +EA+  P Y  +Y        +++KF++ E T +  PHNDALV+TL + N K+HRIL+D GS
Subjt:  PRPTKDGRDKEESP-REIKTIFGGPPGGGSSRKRKAIAREAKFEPEYRGMYSVHLAKAHTRLKFTKAEATSIHQPHNDALVVTLMVANEKIHRILIDRGS

Query:  SANVFSLIAFK----------------------------------------NSVTKTINFLVVDCISAYNAILRRPTLHEMKVIASTYHQLLKFLTQNGV
        S  + SL A+K                                         ++TK + FLVVD  S+YNAIL RPT+H +K I STYH+ LKF T  G+
Subjt:  SANVFSLIAFK----------------------------------------NSVTKTINFLVVDCISAYNAILRRPTLHEMKVIASTYHQLLKFLTQNGV

Query:  GVAKGEQKASRECYWTALK
           KGEQ+ S ECY+T+L+
Subjt:  GVAKGEQKASRECYWTALK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACATTCCTCATTTGACCAGGACAGAAAGGACAAAAAACCACGGACGGACGATGGTGGCCAAGGCGAGCTGACCATGACCATGGCCGAGGCGAGCACATCCCTTTG
GAGTTTGTCGCAGAAACTGGGACCGAGGCCGACCAAAGATGGTCGAGACAAAGAAGAATCCCCACGAGAGATCAAAACCATCTTTGGAGGACCACCTGGAGGAGGTTCAA
GTAGGAAAAGGAAAGCTATTGCCAGAGAAGCAAAGTTTGAACCAGAATACCGAGGTATGTACTCTGTCCATCTAGCAAAGGCACACACCCGTTTGAAGTTCACTAAGGCG
GAGGCAACAAGCATCCATCAGCCACATAATGATGCTTTGGTGGTCACTTTAATGGTAGCCAATGAGAAAATCCATCGGATTCTAATTGATAGAGGAAGTTCGGCTAATGT
CTTTTCTCTAATAGCCTTTAAGAATTCAGTGACAAAGACAATAAATTTCCTAGTTGTGGATTGCATTTCAGCCTACAATGCAATCCTAAGAAGGCCAACCTTGCATGAAA
TGAAGGTCATAGCTTCGACTTATCATCAGTTGCTGAAGTTTCTAACTCAGAATGGCGTGGGAGTTGCCAAAGGAGAGCAGAAGGCATCGAGGGAGTGTTACTGGACCGCG
CTAAAAGAAGTTAAGCCACTGAGGGTCGAGGCCGACCAGGACAAGGCCAACCAGAGGATGAGCCGAGACCGAGCATGGTCTACCTCGCCTCATCCAGATATGAGATTAGG
TGAGCTTGGACCACGGGTCTACCTCACCTCGTCTGGCTTGAGCCCATCACATTACGCGAGCCTGGACTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGACATTCCTCATTTGACCAGGACAGAAAGGACAAAAAACCACGGACGGACGATGGTGGCCAAGGCGAGCTGACCATGACCATGGCCGAGGCGAGCACATCCCTTTG
GAGTTTGTCGCAGAAACTGGGACCGAGGCCGACCAAAGATGGTCGAGACAAAGAAGAATCCCCACGAGAGATCAAAACCATCTTTGGAGGACCACCTGGAGGAGGTTCAA
GTAGGAAAAGGAAAGCTATTGCCAGAGAAGCAAAGTTTGAACCAGAATACCGAGGTATGTACTCTGTCCATCTAGCAAAGGCACACACCCGTTTGAAGTTCACTAAGGCG
GAGGCAACAAGCATCCATCAGCCACATAATGATGCTTTGGTGGTCACTTTAATGGTAGCCAATGAGAAAATCCATCGGATTCTAATTGATAGAGGAAGTTCGGCTAATGT
CTTTTCTCTAATAGCCTTTAAGAATTCAGTGACAAAGACAATAAATTTCCTAGTTGTGGATTGCATTTCAGCCTACAATGCAATCCTAAGAAGGCCAACCTTGCATGAAA
TGAAGGTCATAGCTTCGACTTATCATCAGTTGCTGAAGTTTCTAACTCAGAATGGCGTGGGAGTTGCCAAAGGAGAGCAGAAGGCATCGAGGGAGTGTTACTGGACCGCG
CTAAAAGAAGTTAAGCCACTGAGGGTCGAGGCCGACCAGGACAAGGCCAACCAGAGGATGAGCCGAGACCGAGCATGGTCTACCTCGCCTCATCCAGATATGAGATTAGG
TGAGCTTGGACCACGGGTCTACCTCACCTCGTCTGGCTTGAGCCCATCACATTACGCGAGCCTGGACTACTGA
Protein sequenceShow/hide protein sequence
MRHSSFDQDRKDKKPRTDDGGQGELTMTMAEASTSLWSLSQKLGPRPTKDGRDKEESPREIKTIFGGPPGGGSSRKRKAIAREAKFEPEYRGMYSVHLAKAHTRLKFTKA
EATSIHQPHNDALVVTLMVANEKIHRILIDRGSSANVFSLIAFKNSVTKTINFLVVDCISAYNAILRRPTLHEMKVIASTYHQLLKFLTQNGVGVAKGEQKASRECYWTA
LKEVKPLRVEADQDKANQRMSRDRAWSTSPHPDMRLGELGPRVYLTSSGLSPSHYASLDY