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Lag0031706 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031706
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationchr11:12415979..12416681
RNA-Seq ExpressionLag0031706
SyntenyLag0031706
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW45168.1 putative ribonuclease H protein [Vitis vinifera]7.0e-2733.95Show/hide
Query:  MEKLIRDFFWAGGDVKASSHLLNWDVLPLPLCQG--GLRNGALKRMNMVLLTKWCWRFSMEQNALWRQV-------------------------------
        +EK+ RDF W GG ++   HL+ W+++ L   +G  G+RN AL  MN  LL KW WRF++E  ALW+Q                                
Subjt:  MEKLIRDFFWAGGDVKASSHLLNWDVLPLPLCQG--GLRNGALKRMNMVLLTKWCWRFSMEQNALWRQV-------------------------------

Query:  -WLAFMGRNLFNVGNGTRISFWKDKWLGESYFKDDFLDIFNISLKQNAKVADCWDEEQI--TWKLGIRRGVFDRELQMWIWLTKKLEGFHLEYED-DKIT
         WL       + VGNG R+ FWKDKW G+    + F  +F ISL ++A V+D W+ + +   W     R + D E++M  W   K++ F ++ ED DK+ 
Subjt:  -WLAFMGRNLFNVGNGTRISFWKDKWLGESYFKDDFLDIFNISLKQNAKVADCWDEEQI--TWKLGIRRGVFDRELQMWIWLTKKLEGFHLEYED-DKIT

Query:  WSLEPTRAFSTKSLF
        W+   +  FS KSL+
Subjt:  WSLEPTRAFSTKSLF

RVW53321.1 putative ribonuclease H protein [Vitis vinifera]1.8e-2732.86Show/hide
Query:  MEKLIRDFFWAGGDVKASSHLLNWDVLPLPLCQGGLRNGALKRMNMVLLTKWCWRFSMEQNALWRQV--------------------------------W
        +EK+ RDF W GG ++   HL+ W+++ L   +GGL    L  MN  LL KW WRF++E  ALW+Q                                 W
Subjt:  MEKLIRDFFWAGGDVKASSHLLNWDVLPLPLCQGGLRNGALKRMNMVLLTKWCWRFSMEQNALWRQV--------------------------------W

Query:  LAFMGRNLFNVGNGTRISFWKDKWLGESYFKDDFLDIFNISLKQNAKVADCWDEEQI--TWKLGIRRGVFDRELQMWIWLTKKLEGFHLEYED-DKITWS
        L       + VGNG R+ FWKDKW G+    + F  +F ISL ++A V++ W+ + +   W     R + D E++M  W   K++ F ++ ED DK+ W+
Subjt:  LAFMGRNLFNVGNGTRISFWKDKWLGESYFKDDFLDIFNISLKQNAKVADCWDEEQI--TWKLGIRRGVFDRELQMWIWLTKKLEGFHLEYED-DKITWS

Query:  LEPTRAFSTKSLF
           +  FS KSL+
Subjt:  LEPTRAFSTKSLF

RVW65502.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]1.2e-2632.86Show/hide
Query:  MEKLIRDFFWAGGDVKASSHLLNWDVLPLPLCQGGLRNGALKRMNMVLLTKWCWRFSMEQNALWRQV--------------------------------W
        +EK+ RDF W GG +    HL+ W+++ L   +GGL    L  MN  LL KW WRF+ E++ALWR V                                W
Subjt:  MEKLIRDFFWAGGDVKASSHLLNWDVLPLPLCQGGLRNGALKRMNMVLLTKWCWRFSMEQNALWRQV--------------------------------W

Query:  LAFMGRNLFNVGNGTRISFWKDKWLGESYFKDDFLDIFNISLKQNAKVADCWDE--EQITWKLGIRRGVFDRELQMWIWLTKKLEGFHLE-YEDDKITWS
          F GR  F++GNG R+ FWKDKW G+    + F  +F+IS+ +NA V+D W+   + I W     R   D E+ +   L +K++ F ++  E+D++ W+
Subjt:  LAFMGRNLFNVGNGTRISFWKDKWLGESYFKDDFLDIFNISLKQNAKVADCWDE--EQITWKLGIRRGVFDRELQMWIWLTKKLEGFHLE-YEDDKITWS

Query:  LEPTRAFSTKSLF
              FS ++L+
Subjt:  LEPTRAFSTKSLF

RVX16265.1 putative ribonuclease H protein [Vitis vinifera]5.3e-2732.86Show/hide
Query:  MEKLIRDFFWAGGDVKASSHLLNWDVLPLPLCQGGLRNGALKRMNMVLLTKWCWRFSMEQNALWRQV--------------------------------W
        +EK+ RDF W GG +    HL+ W+++ L   +GGL    L  MN  LL KW WRF+ E+NALWR V                                W
Subjt:  MEKLIRDFFWAGGDVKASSHLLNWDVLPLPLCQGGLRNGALKRMNMVLLTKWCWRFSMEQNALWRQV--------------------------------W

Query:  LAFMGRNLFNVGNGTRISFWKDKWLGESYFKDDFLDIFNISLKQNAKVADCWD--EEQITWKLGIRRGVFDRELQMWIWLTKKLEGFHLE-YEDDKITWS
          F G+  F++GNG R+ FWKDKW G+    + F  +F++S+ +NA V++ W+   + I W     R   D E+ +   L +K++ F ++  E+D++ W+
Subjt:  LAFMGRNLFNVGNGTRISFWKDKWLGESYFKDDFLDIFNISLKQNAKVADCWD--EEQITWKLGIRRGVFDRELQMWIWLTKKLEGFHLE-YEDDKITWS

Query:  LEPTRAFSTKSLF
             AFS +SL+
Subjt:  LEPTRAFSTKSLF

XP_022158566.1 uncharacterized protein LOC111025019 [Momordica charantia]2.0e-2940.83Show/hide
Query:  MEKLIRDFFWAGGDVKASSHLLNWDVLPLPLCQGGLRNGALKRMNMVLLTKWCWRFSMEQNALWRQV-----------WL--------------------
        M K++RD FW+G       +L+ WD+  LP+  GGL  GA    N  LL KW W F+ E+NALWR+V           WL                    
Subjt:  MEKLIRDFFWAGGDVKASSHLLNWDVLPLPLCQGGLRNGALKRMNMVLLTKWCWRFSMEQNALWRQV-----------WL--------------------

Query:  -AFMGRNLFNVGNGTRISFWKDKWLGESYFKDDFLDIFNISLKQNAKVADCWDEEQITWKLGIRRGVFD
         AF    +F    G R+SFW DKW G     D+F D+F +SLKQNA V DCW+EE  TW L +RRG+FD
Subjt:  -AFMGRNLFNVGNGTRISFWKDKWLGESYFKDDFLDIFNISLKQNAKVADCWDEEQITWKLGIRRGVFD

TrEMBL top hitse value%identityAlignment
A0A438EBY2 Putative ribonuclease H protein3.4e-2733.95Show/hide
Query:  MEKLIRDFFWAGGDVKASSHLLNWDVLPLPLCQG--GLRNGALKRMNMVLLTKWCWRFSMEQNALWRQV-------------------------------
        +EK+ RDF W GG ++   HL+ W+++ L   +G  G+RN AL  MN  LL KW WRF++E  ALW+Q                                
Subjt:  MEKLIRDFFWAGGDVKASSHLLNWDVLPLPLCQG--GLRNGALKRMNMVLLTKWCWRFSMEQNALWRQV-------------------------------

Query:  -WLAFMGRNLFNVGNGTRISFWKDKWLGESYFKDDFLDIFNISLKQNAKVADCWDEEQI--TWKLGIRRGVFDRELQMWIWLTKKLEGFHLEYED-DKIT
         WL       + VGNG R+ FWKDKW G+    + F  +F ISL ++A V+D W+ + +   W     R + D E++M  W   K++ F ++ ED DK+ 
Subjt:  -WLAFMGRNLFNVGNGTRISFWKDKWLGESYFKDDFLDIFNISLKQNAKVADCWDEEQI--TWKLGIRRGVFDRELQMWIWLTKKLEGFHLEYED-DKIT

Query:  WSLEPTRAFSTKSLF
        W+   +  FS KSL+
Subjt:  WSLEPTRAFSTKSLF

A0A438EZY9 Putative ribonuclease H protein8.9e-2832.86Show/hide
Query:  MEKLIRDFFWAGGDVKASSHLLNWDVLPLPLCQGGLRNGALKRMNMVLLTKWCWRFSMEQNALWRQV--------------------------------W
        +EK+ RDF W GG ++   HL+ W+++ L   +GGL    L  MN  LL KW WRF++E  ALW+Q                                 W
Subjt:  MEKLIRDFFWAGGDVKASSHLLNWDVLPLPLCQGGLRNGALKRMNMVLLTKWCWRFSMEQNALWRQV--------------------------------W

Query:  LAFMGRNLFNVGNGTRISFWKDKWLGESYFKDDFLDIFNISLKQNAKVADCWDEEQI--TWKLGIRRGVFDRELQMWIWLTKKLEGFHLEYED-DKITWS
        L       + VGNG R+ FWKDKW G+    + F  +F ISL ++A V++ W+ + +   W     R + D E++M  W   K++ F ++ ED DK+ W+
Subjt:  LAFMGRNLFNVGNGTRISFWKDKWLGESYFKDDFLDIFNISLKQNAKVADCWDEEQI--TWKLGIRRGVFDRELQMWIWLTKKLEGFHLEYED-DKITWS

Query:  LEPTRAFSTKSLF
           +  FS KSL+
Subjt:  LEPTRAFSTKSLF

A0A438K4Y4 Putative ribonuclease H protein2.6e-2732.86Show/hide
Query:  MEKLIRDFFWAGGDVKASSHLLNWDVLPLPLCQGGLRNGALKRMNMVLLTKWCWRFSMEQNALWRQV--------------------------------W
        +EK+ RDF W GG +    HL+ W+++ L   +GGL    L  MN  LL KW WRF+ E+NALWR V                                W
Subjt:  MEKLIRDFFWAGGDVKASSHLLNWDVLPLPLCQGGLRNGALKRMNMVLLTKWCWRFSMEQNALWRQV--------------------------------W

Query:  LAFMGRNLFNVGNGTRISFWKDKWLGESYFKDDFLDIFNISLKQNAKVADCWD--EEQITWKLGIRRGVFDRELQMWIWLTKKLEGFHLE-YEDDKITWS
          F G+  F++GNG R+ FWKDKW G+    + F  +F++S+ +NA V++ W+   + I W     R   D E+ +   L +K++ F ++  E+D++ W+
Subjt:  LAFMGRNLFNVGNGTRISFWKDKWLGESYFKDDFLDIFNISLKQNAKVADCWD--EEQITWKLGIRRGVFDRELQMWIWLTKKLEGFHLE-YEDDKITWS

Query:  LEPTRAFSTKSLF
             AFS +SL+
Subjt:  LEPTRAFSTKSLF

A0A6J1E196 uncharacterized protein LOC1110250199.5e-3040.83Show/hide
Query:  MEKLIRDFFWAGGDVKASSHLLNWDVLPLPLCQGGLRNGALKRMNMVLLTKWCWRFSMEQNALWRQV-----------WL--------------------
        M K++RD FW+G       +L+ WD+  LP+  GGL  GA    N  LL KW W F+ E+NALWR+V           WL                    
Subjt:  MEKLIRDFFWAGGDVKASSHLLNWDVLPLPLCQGGLRNGALKRMNMVLLTKWCWRFSMEQNALWRQV-----------WL--------------------

Query:  -AFMGRNLFNVGNGTRISFWKDKWLGESYFKDDFLDIFNISLKQNAKVADCWDEEQITWKLGIRRGVFD
         AF    +F    G R+SFW DKW G     D+F D+F +SLKQNA V DCW+EE  TW L +RRG+FD
Subjt:  -AFMGRNLFNVGNGTRISFWKDKWLGESYFKDDFLDIFNISLKQNAKVADCWDEEQITWKLGIRRGVFD

A0A803QQM3 Uncharacterized protein2.0e-2735.02Show/hide
Query:  MEKLIRDFFWAGGDVKASSHLLNWDVLPLPLCQGGLRNGALKRMNMVLLTKWCWRFSMEQNALWRQVWLAFMGRN-------------------------
        +EK++RDFFW GGD+    HL+ WD +  P  +GGL  G L+  N  LL KW WRF +E N+LW +V  +  GR                          
Subjt:  MEKLIRDFFWAGGDVKASSHLLNWDVLPLPLCQGGLRNGALKRMNMVLLTKWCWRFSMEQNALWRQVWLAFMGRN-------------------------

Query:  -------LFNVGNGTRISFWKDKWLGESYFKDDFLDIFNISLKQNAKVAD-CWDEEQI-----TWKLGIRRGVFDRELQMWIWLTKKLEGFH-LEYEDDK
                F VGNG  I FW+D+W+G S  +D FL++  IS  +NA + +   DE ++     +W L  RR + DRE+     L +KLE    L   DD 
Subjt:  -------LFNVGNGTRISFWKDKWLGESYFKDDFLDIFNISLKQNAKVAD-CWDEEQI-----TWKLGIRRGVFDRELQMWIWLTKKLEGFH-LEYEDDK

Query:  ITWSLEPTRAFSTKSLF
          W  +    FS+KS F
Subjt:  ITWSLEPTRAFSTKSLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAACTGATTAGGGATTTCTTTTGGGCTGGTGGGGATGTTAAAGCTAGTAGTCATCTTTTGAATTGGGATGTTCTTCCCCTTCCGCTTTGCCAAGGAGGTCTGAG
GAATGGGGCCCTTAAGCGTATGAATATGGTTCTTCTTACTAAGTGGTGCTGGAGGTTTTCTATGGAACAAAACGCTTTATGGAGACAGGTGTGGCTAGCATTTATGGGGA
GGAACCTATTTAATGTCGGTAATGGTACTCGAATTAGTTTCTGGAAGGATAAATGGCTGGGAGAGTCCTATTTTAAAGATGATTTTCTAGATATTTTCAATATTTCCTTG
AAGCAAAATGCTAAGGTGGCGGACTGTTGGGATGAGGAGCAAATAACTTGGAAATTGGGTATTAGAAGAGGAGTATTTGATAGAGAATTACAAATGTGGATTTGGCTGAC
AAAGAAGCTGGAAGGTTTTCACCTGGAGTATGAGGATGATAAAATTACTTGGTCTTTGGAACCTACGAGAGCCTTTTCCACCAAATCCTTGTTCCTAAATTTGGCGATGT
CGAGACCCTCTTTAAAATGCCCTCTGCCTAAAGCTAATCTGGGAGTTCGAAGTCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAACTGATTAGGGATTTCTTTTGGGCTGGTGGGGATGTTAAAGCTAGTAGTCATCTTTTGAATTGGGATGTTCTTCCCCTTCCGCTTTGCCAAGGAGGTCTGAG
GAATGGGGCCCTTAAGCGTATGAATATGGTTCTTCTTACTAAGTGGTGCTGGAGGTTTTCTATGGAACAAAACGCTTTATGGAGACAGGTGTGGCTAGCATTTATGGGGA
GGAACCTATTTAATGTCGGTAATGGTACTCGAATTAGTTTCTGGAAGGATAAATGGCTGGGAGAGTCCTATTTTAAAGATGATTTTCTAGATATTTTCAATATTTCCTTG
AAGCAAAATGCTAAGGTGGCGGACTGTTGGGATGAGGAGCAAATAACTTGGAAATTGGGTATTAGAAGAGGAGTATTTGATAGAGAATTACAAATGTGGATTTGGCTGAC
AAAGAAGCTGGAAGGTTTTCACCTGGAGTATGAGGATGATAAAATTACTTGGTCTTTGGAACCTACGAGAGCCTTTTCCACCAAATCCTTGTTCCTAAATTTGGCGATGT
CGAGACCCTCTTTAAAATGCCCTCTGCCTAAAGCTAATCTGGGAGTTCGAAGTCCCTAA
Protein sequenceShow/hide protein sequence
MEKLIRDFFWAGGDVKASSHLLNWDVLPLPLCQGGLRNGALKRMNMVLLTKWCWRFSMEQNALWRQVWLAFMGRNLFNVGNGTRISFWKDKWLGESYFKDDFLDIFNISL
KQNAKVADCWDEEQITWKLGIRRGVFDRELQMWIWLTKKLEGFHLEYEDDKITWSLEPTRAFSTKSLFLNLAMSRPSLKCPLPKANLGVRSP