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Lag0031715 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031715
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPre-mRNA-splicing factor SLU7
Genome locationchr11:12590327..12592193
RNA-Seq ExpressionLag0031715
SyntenyLag0031715
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0051603 - proteolysis involved in cellular protein catabolic process (biological process)
GO:0005681 - spliceosomal complex (cellular component)
GO:0005839 - proteasome core complex (cellular component)
GO:0000386 - second spliceosomal transesterification activity (molecular function)
GO:0030628 - pre-mRNA 3'-splice site binding (molecular function)
InterPro domainsIPR039974 - Pre-mRNA-splicing factor SLU7


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8550751.1 hypothetical protein F0562_002435 [Nyssa sinensis]3.1e-2278.87Show/hide
Query:  LRTCTLKTLLYKACPEREDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ
        L +C     L  A   REDHRKQLELEE RK GLAPAE+DEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ
Subjt:  LRTCTLKTLLYKACPEREDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ

KAG6498403.1 hypothetical protein ZIOFF_046316 [Zingiber officinale]5.2e-2275.68Show/hide
Query:  EKKLRTCTLKTLLYKACPEREDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ
        E +L   T+  L+  +   REDHRKQLELEE RK GLAPAE+DEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ
Subjt:  EKKLRTCTLKTLLYKACPEREDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ

RVW33373.1 Pre-mRNA-splicing factor SLU7-A [Vitis vinifera]2.7e-2671.43Show/hide
Query:  ACPEREDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQGSGNQIQIIQSPGMTEVQKYIRQTSIRRVHVK
        A   REDHRKQLELEE RK GLAPAE+DEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ                VQKY R+ SI RVHVK
Subjt:  ACPEREDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQGSGNQIQIIQSPGMTEVQKYIRQTSIRRVHVK

RYQ91794.1 hypothetical protein Ahy_B09g097825 isoform A [Arachis hypogaea]1.4e-2272.15Show/hide
Query:  NVIQLEKKLRTCTLKTLLYKACPEREDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ
        +V +L   L TC++    +K+   REDHRKQLELEE RK GLAPAE+DEDGKEINPHIPQYMSSAPWYLNAE+PSLKHQ
Subjt:  NVIQLEKKLRTCTLKTLLYKACPEREDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ

RYQ91795.1 hypothetical protein Ahy_B09g097825 isoform C [Arachis hypogaea]1.4e-2272.15Show/hide
Query:  NVIQLEKKLRTCTLKTLLYKACPEREDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ
        +V +L   L TC++    +K+   REDHRKQLELEE RK GLAPAE+DEDGKEINPHIPQYMSSAPWYLNAE+PSLKHQ
Subjt:  NVIQLEKKLRTCTLKTLLYKACPEREDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ

TrEMBL top hitse value%identityAlignment
A0A438DD27 Pre-mRNA-splicing factor SLU71.3e-2671.43Show/hide
Query:  ACPEREDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQGSGNQIQIIQSPGMTEVQKYIRQTSIRRVHVK
        A   REDHRKQLELEE RK GLAPAE+DEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ                VQKY R+ SI RVHVK
Subjt:  ACPEREDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQGSGNQIQIIQSPGMTEVQKYIRQTSIRRVHVK

A0A444XQH4 Pre-mRNA-splicing factor SLU76.7e-2372.15Show/hide
Query:  NVIQLEKKLRTCTLKTLLYKACPEREDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ
        +V +L   L TC++    +K+   REDHRKQLELEE RK GLAPAE+DEDGKEINPHIPQYMSSAPWYLNAE+PSLKHQ
Subjt:  NVIQLEKKLRTCTLKTLLYKACPEREDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ

A0A444XQH6 Pre-mRNA-splicing factor SLU76.7e-2372.15Show/hide
Query:  NVIQLEKKLRTCTLKTLLYKACPEREDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ
        +V +L   L TC++    +K+   REDHRKQLELEE RK GLAPAE+DEDGKEINPHIPQYMSSAPWYLNAE+PSLKHQ
Subjt:  NVIQLEKKLRTCTLKTLLYKACPEREDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ

A0A5J5CAS4 Pre-mRNA-splicing factor SLU71.5e-2278.87Show/hide
Query:  LRTCTLKTLLYKACPEREDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ
        L +C     L  A   REDHRKQLELEE RK GLAPAE+DEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ
Subjt:  LRTCTLKTLLYKACPEREDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ

A0A7J0GRX3 Pre-mRNA-splicing factor SLU73.3e-2264.37Show/hide
Query:  FQCNCPKSNVIQLEKKLRTCTLKTLLYKACPEREDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ
        F C C +     L++ +       + +K+   REDHRKQ+ELEE RK GLAPAE+DEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ
Subjt:  FQCNCPKSNVIQLEKKLRTCTLKTLLYKACPEREDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ

SwissProt top hitse value%identityAlignment
A2YQU8 Pre-mRNA-splicing factor SLU71.7e-2390.91Show/hide
Query:  REDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ
        REDHRKQLELEE RK GLAPAE+DEDGKEINPHIPQYMSSAPWYLNA++PSLKHQ
Subjt:  REDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ

O23174 Pre-mRNA-splicing factor SLU7-B1.6e-2179.66Show/hide
Query:  ACPEREDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ
        A   REDHRK+LELEE RK GLAPAE+DEDGKEINPHIP+YMS APWYL +E+PSLKHQ
Subjt:  ACPEREDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ

Q54TA0 Pre-mRNA-splicing factor slu76.9e-1767.27Show/hide
Query:  REDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ
        R++++K+ EL+E RK G APAE+DE+GKEINPHIP+Y+  APWYLNA +PSLKHQ
Subjt:  REDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ

Q6ZK48 Pre-mRNA-splicing factor SLU71.7e-2390.91Show/hide
Query:  REDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ
        REDHRKQLELEE RK GLAPAE+DEDGKEINPHIPQYMSSAPWYLNA++PSLKHQ
Subjt:  REDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ

Q9SHY8 Pre-mRNA-splicing factor SLU7-A2.2e-2384.75Show/hide
Query:  ACPEREDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ
        A   REDHRKQ+ELEE RK GLAPAE+DEDGKEINPHIPQYMSSAPWYLN+E+PSLKHQ
Subjt:  ACPEREDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ

Arabidopsis top hitse value%identityAlignment
AT1G65660.1 Pre-mRNA splicing Prp18-interacting factor1.6e-2484.75Show/hide
Query:  ACPEREDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ
        A   REDHRKQ+ELEE RK GLAPAE+DEDGKEINPHIPQYMSSAPWYLN+E+PSLKHQ
Subjt:  ACPEREDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ

AT3G45950.1 Pre-mRNA splicing Prp18-interacting factor2.0e-1666.1Show/hide
Query:  ACPEREDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ
        A   R+DHRKQ ELEE RK GLAPAE+DE GKEIN HIP+Y++  P Y  +E+PSLKHQ
Subjt:  ACPEREDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ

AT4G37120.1 Pre-mRNA splicing Prp18-interacting factor1.1e-2279.66Show/hide
Query:  ACPEREDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ
        A   REDHRK+LELEE RK GLAPAE+DEDGKEINPHIP+YMS APWYL +E+PSLKHQ
Subjt:  ACPEREDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAAGAGAGGCTTTATGGATTCACCGTCGATTCCTTTCAGTGTAATTGTCCAAAGTCTAATGTGATTCAATTGGAGAAGAAGCTTAGAACATGCACTTTGAAGAC
TCTGCTTTACAAAGCATGCCCAGAAAGGGAAGACCATCGCAAACAACTTGAATTAGAGGAAGTGCGTAAGGTCGGGCTTGCTCCAGCTGAGATGGATGAAGATGGGAAAG
AAATCAACCCTCACATTCCTCAATATATGTCCTCTGCACCTTGGTATCTTAATGCTGAGAGACCAAGTTTGAAACATCAAGGAAGTGGAAATCAGATCCAAATTATACAA
AGTCCTGGTATGACAGAGGTGCAAAAATACATCAGGCAGACAAGTATTCGAAGGGTGCATGTAAAAAATGGATATGTTTTCTGTAGGGGAAACAAAACCATGTCATTGTC
AAGTGAAGTGAAGGTTGTGTTATGGGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGGAAGAGAGGCTTTATGGATTCACCGTCGATTCCTTTCAGTGTAATTGTCCAAAGTCTAATGTGATTCAATTGGAGAAGAAGCTTAGAACATGCACTTTGAAGAC
TCTGCTTTACAAAGCATGCCCAGAAAGGGAAGACCATCGCAAACAACTTGAATTAGAGGAAGTGCGTAAGGTCGGGCTTGCTCCAGCTGAGATGGATGAAGATGGGAAAG
AAATCAACCCTCACATTCCTCAATATATGTCCTCTGCACCTTGGTATCTTAATGCTGAGAGACCAAGTTTGAAACATCAAGGAAGTGGAAATCAGATCCAAATTATACAA
AGTCCTGGTATGACAGAGGTGCAAAAATACATCAGGCAGACAAGTATTCGAAGGGTGCATGTAAAAAATGGATATGTTTTCTGTAGGGGAAACAAAACCATGTCATTGTC
AAGTGAAGTGAAGGTTGTGTTATGGGTGTAG
Protein sequenceShow/hide protein sequence
MLEERLYGFTVDSFQCNCPKSNVIQLEKKLRTCTLKTLLYKACPEREDHRKQLELEEVRKVGLAPAEMDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQGSGNQIQIIQ
SPGMTEVQKYIRQTSIRRVHVKNGYVFCRGNKTMSLSSEVKVVLWV