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Lag0031737 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031737
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol protein
Genome locationchr11:13266765..13267119
RNA-Seq ExpressionLag0031737
SyntenyLag0031737
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025818.1 DNA-binding protein HEXBP-like [Cucumis melo var. makuwa]1.5e-0945.35Show/hide
Query:  WSNPILDW--RDQCG-PFQKKVLEGFPPSRSKLVPQASSLNQIQKKNGDKGKAPTKAVQGKEKTKVMADKGKCFHCNVDGHWKSNC
        WS  +  W  ++  G PF +   E       +  P +S   +IQK+   KGK PT A++GK KTKV+  KGKCFHCNVD HWK+NC
Subjt:  WSNPILDW--RDQCG-PFQKKVLEGFPPSRSKLVPQASSLNQIQKKNGDKGKAPTKAVQGKEKTKVMADKGKCFHCNVDGHWKSNC

KAA0035551.1 gag/pol protein [Cucumis melo var. makuwa]8.8e-1055.88Show/hide
Query:  QKKVLEGFPPSRSKLVPQASSLNQIQKKNGDKGKAPTKAVQGKEKTKVMADKGKCFHCNVDGHWKSNC
        QK+  E    SR +  P +S   +IQK+ G KGK+PT A +GK KTK+ A KGKCF+CNVDGHWK NC
Subjt:  QKKVLEGFPPSRSKLVPQASSLNQIQKKNGDKGKAPTKAVQGKEKTKVMADKGKCFHCNVDGHWKSNC

KAA0042123.1 gag/pol protein [Cucumis melo var. makuwa]4.0e-1043.18Show/hide
Query:  FTAIQWSNPILDWRDQCGPFQKKVLEGFPPSRSKLVPQASSLNQIQKKNGDKGKAPTKAVQGKEKTKVMADKGKCFHCNVDGHWKSNC
        F  ++ +  + D + Q    QK+       SR +  P +S   +IQK+ G KGK PT   + K K KV+  KGKCFHCNVDGHWK NC
Subjt:  FTAIQWSNPILDWRDQCGPFQKKVLEGFPPSRSKLVPQASSLNQIQKKNGDKGKAPTKAVQGKEKTKVMADKGKCFHCNVDGHWKSNC

KAA0065386.1 gag/pol protein [Cucumis melo var. makuwa]2.6e-0955.88Show/hide
Query:  QKKVLEGFPPSRSKLVPQASSLNQIQKKNGDKGKAPTKAVQGKEKTKVMADKGKCFHCNVDGHWKSNC
        Q K    F  SR +  P +S   +IQK+   KGK PT AV+GKEK KV+  KGKCFHCNVD HWK+NC
Subjt:  QKKVLEGFPPSRSKLVPQASSLNQIQKKNGDKGKAPTKAVQGKEKTKVMADKGKCFHCNVDGHWKSNC

TYK02410.1 DNA-binding protein HEXBP-like [Cucumis melo var. makuwa]2.3e-1052Show/hide
Query:  RDQCGPFQKKVLEGFPPSRSKLVPQASSLNQIQKKNGDKGKAPTKAVQGKEKTKVMADKGKCFHCNVDGHWKSNC
        R +C PFQ            +  P +S   +IQK+ G KGK PT AV+GKEK KV A KGKCFHCN+ GHWK NC
Subjt:  RDQCGPFQKKVLEGFPPSRSKLVPQASSLNQIQKKNGDKGKAPTKAVQGKEKTKVMADKGKCFHCNVDGHWKSNC

TrEMBL top hitse value%identityAlignment
A0A5A7SI25 DNA-binding protein HEXBP-like7.3e-1045.35Show/hide
Query:  WSNPILDW--RDQCG-PFQKKVLEGFPPSRSKLVPQASSLNQIQKKNGDKGKAPTKAVQGKEKTKVMADKGKCFHCNVDGHWKSNC
        WS  +  W  ++  G PF +   E       +  P +S   +IQK+   KGK PT A++GK KTKV+  KGKCFHCNVD HWK+NC
Subjt:  WSNPILDW--RDQCG-PFQKKVLEGFPPSRSKLVPQASSLNQIQKKNGDKGKAPTKAVQGKEKTKVMADKGKCFHCNVDGHWKSNC

A0A5A7T1U3 Gag/pol protein4.3e-1055.88Show/hide
Query:  QKKVLEGFPPSRSKLVPQASSLNQIQKKNGDKGKAPTKAVQGKEKTKVMADKGKCFHCNVDGHWKSNC
        QK+  E    SR +  P +S   +IQK+ G KGK+PT A +GK KTK+ A KGKCF+CNVDGHWK NC
Subjt:  QKKVLEGFPPSRSKLVPQASSLNQIQKKNGDKGKAPTKAVQGKEKTKVMADKGKCFHCNVDGHWKSNC

A0A5A7TFX6 Gag/pol protein1.9e-1043.18Show/hide
Query:  FTAIQWSNPILDWRDQCGPFQKKVLEGFPPSRSKLVPQASSLNQIQKKNGDKGKAPTKAVQGKEKTKVMADKGKCFHCNVDGHWKSNC
        F  ++ +  + D + Q    QK+       SR +  P +S   +IQK+ G KGK PT   + K K KV+  KGKCFHCNVDGHWK NC
Subjt:  FTAIQWSNPILDWRDQCGPFQKKVLEGFPPSRSKLVPQASSLNQIQKKNGDKGKAPTKAVQGKEKTKVMADKGKCFHCNVDGHWKSNC

A0A5A7VGC7 Gag/pol protein1.2e-0955.88Show/hide
Query:  QKKVLEGFPPSRSKLVPQASSLNQIQKKNGDKGKAPTKAVQGKEKTKVMADKGKCFHCNVDGHWKSNC
        Q K    F  SR +  P +S   +IQK+   KGK PT AV+GKEK KV+  KGKCFHCNVD HWK+NC
Subjt:  QKKVLEGFPPSRSKLVPQASSLNQIQKKNGDKGKAPTKAVQGKEKTKVMADKGKCFHCNVDGHWKSNC

A0A5D3BTG2 DNA-binding protein HEXBP-like1.1e-1052Show/hide
Query:  RDQCGPFQKKVLEGFPPSRSKLVPQASSLNQIQKKNGDKGKAPTKAVQGKEKTKVMADKGKCFHCNVDGHWKSNC
        R +C PFQ            +  P +S   +IQK+ G KGK PT AV+GKEK KV A KGKCFHCN+ GHWK NC
Subjt:  RDQCGPFQKKVLEGFPPSRSKLVPQASSLNQIQKKNGDKGKAPTKAVQGKEKTKVMADKGKCFHCNVDGHWKSNC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTTCACTGCAATCCAGTGGTCTAACCCTATATTAGACTGGAGAGACCAATGTGGCCCATTCCAAAAGAAAGTTCTTGAAGGGTTCCCCCCCTCAAGAAGCAAACT
TGTACCTCAAGCTTCTTCATTGAATCAAATTCAGAAGAAGAATGGTGACAAGGGGAAGGCTCCTACTAAGGCTGTACAGGGCAAGGAAAAGACCAAGGTCATGGCCGATA
AGGGCAAGTGCTTCCACTGTAATGTGGATGGTCACTGGAAGAGCAACTGTGGATGGTCACTGGAAGAGCAACTGCCATTGATACCTTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTTTCACTGCAATCCAGTGGTCTAACCCTATATTAGACTGGAGAGACCAATGTGGCCCATTCCAAAAGAAAGTTCTTGAAGGGTTCCCCCCCTCAAGAAGCAAACT
TGTACCTCAAGCTTCTTCATTGAATCAAATTCAGAAGAAGAATGGTGACAAGGGGAAGGCTCCTACTAAGGCTGTACAGGGCAAGGAAAAGACCAAGGTCATGGCCGATA
AGGGCAAGTGCTTCCACTGTAATGTGGATGGTCACTGGAAGAGCAACTGTGGATGGTCACTGGAAGAGCAACTGCCATTGATACCTTGCTGA
Protein sequenceShow/hide protein sequence
MLFTAIQWSNPILDWRDQCGPFQKKVLEGFPPSRSKLVPQASSLNQIQKKNGDKGKAPTKAVQGKEKTKVMADKGKCFHCNVDGHWKSNCGWSLEEQLPLIPC