; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0031745 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031745
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr11:13347250..13347927
RNA-Seq ExpressionLag0031745
SyntenyLag0031745
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsIPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050146.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.5e-4149.57Show/hide
Query:  KHQKTEILPTTMAVFHPPSQTPQTNHSHRERGRRSFHNRRGTTHSFGVENFRQQHNPNFHG--FQPSSHGFG--------PNSFGPNARHS---YGPNTQ
        K    E +PT MA FHPP      +H  R RGRR         HS G  NF    N +  G  F   S G G        PN F PN  +      P+  
Subjt:  KHQKTEILPTTMAVFHPPSQTPQTNHSHRERGRRSFHNRRGTTHSFGVENFRQQHNPNFHG--FQPSSHGFG--------PNSFGPNARHS---YGPNTQ

Query:  AIGQNFGRGILGSGQNSGSSIESGSFFGSGQNTLNGGRISCQICSKFGHSALDCYNRMNFSYQGQHPPAQMAAMAVNSINPEHSSDTSNNFWLSDSGCTV
               RGI+GS  + G S    + FG        GRI CQIC K GH ALDCYNRMNFSYQG+HPP+Q+AAM VNS+N + S + +NNFWL DSGC V
Subjt:  AIGQNFGRGILGSGQNSGSSIESGSFFGSGQNTLNGGRISCQICSKFGHSALDCYNRMNFSYQGQHPPAQMAAMAVNSINPEHSSDTSNNFWLSDSGCTV

Query:  HMTNDLANLNLSNNYNGEESVTVGNGQPLNIQ
        HMTN+LANLNLSNNYNGEE+VTV N QPLNI+
Subjt:  HMTNDLANLNLSNNYNGEESVTVGNGQPLNIQ

KAA0067173.1 retrotransposon protein [Cucumis melo var. makuwa]3.4e-3849.57Show/hide
Query:  KHQKTEILPTTMAVFHPPSQTPQTNHSHRERGRRSFHNRRGTTHSFGVENFRQQHNPNFHGFQ--------PSSHGFG--PNSFGPNARHSYGP-----N
        K    E +PT MA FH     P  +HS R RGRR         HS G   F    N +  G           S++ FG  PN F PN  +++GP     +
Subjt:  KHQKTEILPTTMAVFHPPSQTPQTNHSHRERGRRSFHNRRGTTHSFGVENFRQQHNPNFHGFQ--------PSSHGFG--PNSFGPNARHSYGP-----N

Query:  TQAIGQNFGRGILGSGQNSGSSIESGSFFGSGQNTLNGGRISCQICSKFGHSALDCYNRMNFSYQGQHPPAQMAAMAVNSINPEHSSDTSNNFWLSDSGC
           +  N  RGI+GS  + G S    +   SG N    GRI CQIC K  H ALDCYN MNFSYQ +H P+Q+AAMAVNS+N + SS+ +NNFWLSDSG 
Subjt:  TQAIGQNFGRGILGSGQNSGSSIESGSFFGSGQNTLNGGRISCQICSKFGHSALDCYNRMNFSYQGQHPPAQMAAMAVNSINPEHSSDTSNNFWLSDSGC

Query:  TVHMTNDLANLNLSNNYNGEESVTVGNGQPLNIQ
         VHMTN+LANLNLSNNYNGEE+VTVGNGQPLNI+
Subjt:  TVHMTNDLANLNLSNNYNGEESVTVGNGQPLNIQ

TYK06402.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.5e-4149.57Show/hide
Query:  KHQKTEILPTTMAVFHPPSQTPQTNHSHRERGRRSFHNRRGTTHSFGVENFRQQHNPNFHG--FQPSSHGFG--------PNSFGPNARHS---YGPNTQ
        K    E +PT MA FHPP      +H  R RGRR         HS G  NF    N +  G  F   S G G        PN F PN  +      P+  
Subjt:  KHQKTEILPTTMAVFHPPSQTPQTNHSHRERGRRSFHNRRGTTHSFGVENFRQQHNPNFHG--FQPSSHGFG--------PNSFGPNARHS---YGPNTQ

Query:  AIGQNFGRGILGSGQNSGSSIESGSFFGSGQNTLNGGRISCQICSKFGHSALDCYNRMNFSYQGQHPPAQMAAMAVNSINPEHSSDTSNNFWLSDSGCTV
               RGI+GS  + G S    + FG        GRI CQIC K GH ALDCYNRMNFSYQG+HPP+Q+AAM VNS+N + S + +NNFWL DSGC V
Subjt:  AIGQNFGRGILGSGQNSGSSIESGSFFGSGQNTLNGGRISCQICSKFGHSALDCYNRMNFSYQGQHPPAQMAAMAVNSINPEHSSDTSNNFWLSDSGCTV

Query:  HMTNDLANLNLSNNYNGEESVTVGNGQPLNIQ
        HMTN+LANLNLSNNYNGEE+VTV N QPLNI+
Subjt:  HMTNDLANLNLSNNYNGEESVTVGNGQPLNIQ

XP_016902697.1 PREDICTED: uncharacterized protein LOC107991825 [Cucumis melo]1.3e-4250.43Show/hide
Query:  MIQKHQKTEILPTTMAVFHPPSQTPQTNHSHRERGRRSFHNRRGTTHSFGVENFRQQHNPNFHG--FQPSSHGFGP-NSFGPNARHSYGPNTQAIG----
        ++ K    E +PT MA FHPP      +H  R RGRR         HS G  NF    N +  G  F   S G G  N+FG    H + PN    G    
Subjt:  MIQKHQKTEILPTTMAVFHPPSQTPQTNHSHRERGRRSFHNRRGTTHSFGVENFRQQHNPNFHG--FQPSSHGFGP-NSFGPNARHSYGPNTQAIG----

Query:  -QNFGRGILGSGQNSGSSIESGSFFGSGQNTLNGGRISCQICSKFGHSALDCYNRMNFSYQGQHPPAQMAAMAVNSINPEHSSDTSNNFWLSDSGCTVHM
          NF    L      GSS+  G  F    N+   GRI CQIC K GH ALDCYNRMNFSYQGQHPP+Q+ AMA+NS+N +   + +NNF LSDSGC VHM
Subjt:  -QNFGRGILGSGQNSGSSIESGSFFGSGQNTLNGGRISCQICSKFGHSALDCYNRMNFSYQGQHPPAQMAAMAVNSINPEHSSDTSNNFWLSDSGCTVHM

Query:  TNDLANLNLSNNYNGEESVTVGNGQPLNIQ
        TN+LANLNLSNNYNGEE+VTVGNGQP+NI+
Subjt:  TNDLANLNLSNNYNGEESVTVGNGQPLNIQ

XP_022150845.1 uncharacterized protein LOC111018892 [Momordica charantia]3.2e-2045.86Show/hide
Query:  NSFGPNARHSYGPNTQAIGQNFGRG---ILGSGQNSGSSIESGSFFGSGQNTLNGGRISCQICSKFGHSALDCYNRMNFSYQGQHPPAQMAAM-AVNSIN
        ++F PN  H  G      G+N GRG      +  N G    SG+FF S Q      R  CQIC K GH+ALDCYNRMNF +QG+HPP Q+AAM AV + +
Subjt:  NSFGPNARHSYGPNTQAIGQNFGRG---ILGSGQNSGSSIESGSFFGSGQNTLNGGRISCQICSKFGHSALDCYNRMNFSYQGQHPPAQMAAM-AVNSIN

Query:  PEHSSDTSNNFWLSDSGCTVHMTNDLANL---NLSNNYNGEESVTVGNGQPLNIQTH
             ++S   WL+DS C  HMT DL+NL   +++++YNGEE+++VG+GQ   I TH
Subjt:  PEHSSDTSNNFWLSDSGCTVHMTNDLANL---NLSNNYNGEESVTVGNGQPLNIQTH

TrEMBL top hitse value%identityAlignment
A0A1S4E394 uncharacterized protein LOC1079918256.4e-4350.43Show/hide
Query:  MIQKHQKTEILPTTMAVFHPPSQTPQTNHSHRERGRRSFHNRRGTTHSFGVENFRQQHNPNFHG--FQPSSHGFGP-NSFGPNARHSYGPNTQAIG----
        ++ K    E +PT MA FHPP      +H  R RGRR         HS G  NF    N +  G  F   S G G  N+FG    H + PN    G    
Subjt:  MIQKHQKTEILPTTMAVFHPPSQTPQTNHSHRERGRRSFHNRRGTTHSFGVENFRQQHNPNFHG--FQPSSHGFGP-NSFGPNARHSYGPNTQAIG----

Query:  -QNFGRGILGSGQNSGSSIESGSFFGSGQNTLNGGRISCQICSKFGHSALDCYNRMNFSYQGQHPPAQMAAMAVNSINPEHSSDTSNNFWLSDSGCTVHM
          NF    L      GSS+  G  F    N+   GRI CQIC K GH ALDCYNRMNFSYQGQHPP+Q+ AMA+NS+N +   + +NNF LSDSGC VHM
Subjt:  -QNFGRGILGSGQNSGSSIESGSFFGSGQNTLNGGRISCQICSKFGHSALDCYNRMNFSYQGQHPPAQMAAMAVNSINPEHSSDTSNNFWLSDSGCTVHM

Query:  TNDLANLNLSNNYNGEESVTVGNGQPLNIQ
        TN+LANLNLSNNYNGEE+VTVGNGQP+NI+
Subjt:  TNDLANLNLSNNYNGEESVTVGNGQPLNIQ

A0A2N9EZ90 Uncharacterized protein6.9e-2144.55Show/hide
Query:  SQTPQTNHSHRERGRRSFHNR-RGTTH-SFGVENFRQQHNPNFHGFQPSSHGFGPNSFGPNARHSYGPNTQAIGQNFGRGILGSGQNSGSSIESGSFFGS
        S T  +      RGR  FHNR RG     F    F   +NP  HG+ PS+ G+   S GP  +    PN      NF +    S QN   S  S +F   
Subjt:  SQTPQTNHSHRERGRRSFHNR-RGTTH-SFGVENFRQQHNPNFHGFQPSSHGFGPNSFGPNARHSYGPNTQAIGQNFGRGILGSGQNSGSSIESGSFFGS

Query:  GQNTLNGGRISCQICSKFGHSALDCYNRMNFSYQGQHPPAQMAAMAVNSINPEHSSDTSNNFWLSDSGCTVHMTNDLANLNLSNNYNGEESVTVGNGQPL
          +T N  R  CQIC K GH ALDCYNRMN+SYQG+HPPA++AAMA        S   S N W+SD+G T H T DLANL  S+ YN  + V+VGNGQ L
Subjt:  GQNTLNGGRISCQICSKFGHSALDCYNRMNFSYQGQHPPAQMAAMAVNSINPEHSSDTSNNFWLSDSGCTVHMTNDLANLNLSNNYNGEESVTVGNGQPL

Query:  NI
         I
Subjt:  NI

A0A5A7U7J4 Putative mitochondrial protein7.1e-4249.57Show/hide
Query:  KHQKTEILPTTMAVFHPPSQTPQTNHSHRERGRRSFHNRRGTTHSFGVENFRQQHNPNFHG--FQPSSHGFG--------PNSFGPNARHS---YGPNTQ
        K    E +PT MA FHPP      +H  R RGRR         HS G  NF    N +  G  F   S G G        PN F PN  +      P+  
Subjt:  KHQKTEILPTTMAVFHPPSQTPQTNHSHRERGRRSFHNRRGTTHSFGVENFRQQHNPNFHG--FQPSSHGFG--------PNSFGPNARHS---YGPNTQ

Query:  AIGQNFGRGILGSGQNSGSSIESGSFFGSGQNTLNGGRISCQICSKFGHSALDCYNRMNFSYQGQHPPAQMAAMAVNSINPEHSSDTSNNFWLSDSGCTV
               RGI+GS  + G S    + FG        GRI CQIC K GH ALDCYNRMNFSYQG+HPP+Q+AAM VNS+N + S + +NNFWL DSGC V
Subjt:  AIGQNFGRGILGSGQNSGSSIESGSFFGSGQNTLNGGRISCQICSKFGHSALDCYNRMNFSYQGQHPPAQMAAMAVNSINPEHSSDTSNNFWLSDSGCTV

Query:  HMTNDLANLNLSNNYNGEESVTVGNGQPLNIQ
        HMTN+LANLNLSNNYNGEE+VTV N QPLNI+
Subjt:  HMTNDLANLNLSNNYNGEESVTVGNGQPLNIQ

A0A5A7VGG0 Retrotransposon protein1.6e-3849.57Show/hide
Query:  KHQKTEILPTTMAVFHPPSQTPQTNHSHRERGRRSFHNRRGTTHSFGVENFRQQHNPNFHGFQ--------PSSHGFG--PNSFGPNARHSYGP-----N
        K    E +PT MA FH     P  +HS R RGRR         HS G   F    N +  G           S++ FG  PN F PN  +++GP     +
Subjt:  KHQKTEILPTTMAVFHPPSQTPQTNHSHRERGRRSFHNRRGTTHSFGVENFRQQHNPNFHGFQ--------PSSHGFG--PNSFGPNARHSYGP-----N

Query:  TQAIGQNFGRGILGSGQNSGSSIESGSFFGSGQNTLNGGRISCQICSKFGHSALDCYNRMNFSYQGQHPPAQMAAMAVNSINPEHSSDTSNNFWLSDSGC
           +  N  RGI+GS  + G S    +   SG N    GRI CQIC K  H ALDCYN MNFSYQ +H P+Q+AAMAVNS+N + SS+ +NNFWLSDSG 
Subjt:  TQAIGQNFGRGILGSGQNSGSSIESGSFFGSGQNTLNGGRISCQICSKFGHSALDCYNRMNFSYQGQHPPAQMAAMAVNSINPEHSSDTSNNFWLSDSGC

Query:  TVHMTNDLANLNLSNNYNGEESVTVGNGQPLNIQ
         VHMTN+LANLNLSNNYNGEE+VTVGNGQPLNI+
Subjt:  TVHMTNDLANLNLSNNYNGEESVTVGNGQPLNIQ

A0A5D3C579 Putative mitochondrial protein7.1e-4249.57Show/hide
Query:  KHQKTEILPTTMAVFHPPSQTPQTNHSHRERGRRSFHNRRGTTHSFGVENFRQQHNPNFHG--FQPSSHGFG--------PNSFGPNARHS---YGPNTQ
        K    E +PT MA FHPP      +H  R RGRR         HS G  NF    N +  G  F   S G G        PN F PN  +      P+  
Subjt:  KHQKTEILPTTMAVFHPPSQTPQTNHSHRERGRRSFHNRRGTTHSFGVENFRQQHNPNFHG--FQPSSHGFG--------PNSFGPNARHS---YGPNTQ

Query:  AIGQNFGRGILGSGQNSGSSIESGSFFGSGQNTLNGGRISCQICSKFGHSALDCYNRMNFSYQGQHPPAQMAAMAVNSINPEHSSDTSNNFWLSDSGCTV
               RGI+GS  + G S    + FG        GRI CQIC K GH ALDCYNRMNFSYQG+HPP+Q+AAM VNS+N + S + +NNFWL DSGC V
Subjt:  AIGQNFGRGILGSGQNSGSSIESGSFFGSGQNTLNGGRISCQICSKFGHSALDCYNRMNFSYQGQHPPAQMAAMAVNSINPEHSSDTSNNFWLSDSGCTV

Query:  HMTNDLANLNLSNNYNGEESVTVGNGQPLNIQ
        HMTN+LANLNLSNNYNGEE+VTV N QPLNI+
Subjt:  HMTNDLANLNLSNNYNGEESVTVGNGQPLNIQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATACAAAAGCATCAGAAGACGGAAATCCTGCCCACGACCATGGCTGTGTTTCATCCACCTTCACAGACACCACAAACCAACCACAGTCATCGCGAGCGAGGAAGACG
ATCTTTTCACAATCGCAGGGGAACGACGCATTCCTTCGGCGTTGAGAATTTTCGACAGCAACACAACCCTAATTTTCACGGTTTTCAGCCCTCTTCACACGGTTTTGGGC
CTAACTCTTTTGGGCCAAACGCCAGACACTCATATGGACCCAACACACAAGCAATTGGACAGAATTTTGGGCGTGGTATTCTTGGATCGGGTCAAAATTCTGGGTCTTCA
ATCGAATCTGGGTCGTTTTTCGGGTCTGGACAAAATACACTGAATGGAGGTCGAATTTCTTGCCAAATTTGCTCTAAATTTGGACATAGTGCACTTGATTGTTACAACCG
AATGAATTTTTCTTATCAAGGCCAACATCCCCCAGCACAAATGGCAGCTATGGCGGTAAATTCAATAAACCCAGAGCATTCCTCTGATACTTCTAATAATTTTTGGTTAT
CTGACAGTGGATGCACTGTTCACATGACAAACGACTTGGCCAATCTCAATTTATCAAACAATTACAATGGAGAAGAATCTGTCACAGTGGGTAATGGTCAACCTCTAAAC
ATCCAAACACACCGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATACAAAAGCATCAGAAGACGGAAATCCTGCCCACGACCATGGCTGTGTTTCATCCACCTTCACAGACACCACAAACCAACCACAGTCATCGCGAGCGAGGAAGACG
ATCTTTTCACAATCGCAGGGGAACGACGCATTCCTTCGGCGTTGAGAATTTTCGACAGCAACACAACCCTAATTTTCACGGTTTTCAGCCCTCTTCACACGGTTTTGGGC
CTAACTCTTTTGGGCCAAACGCCAGACACTCATATGGACCCAACACACAAGCAATTGGACAGAATTTTGGGCGTGGTATTCTTGGATCGGGTCAAAATTCTGGGTCTTCA
ATCGAATCTGGGTCGTTTTTCGGGTCTGGACAAAATACACTGAATGGAGGTCGAATTTCTTGCCAAATTTGCTCTAAATTTGGACATAGTGCACTTGATTGTTACAACCG
AATGAATTTTTCTTATCAAGGCCAACATCCCCCAGCACAAATGGCAGCTATGGCGGTAAATTCAATAAACCCAGAGCATTCCTCTGATACTTCTAATAATTTTTGGTTAT
CTGACAGTGGATGCACTGTTCACATGACAAACGACTTGGCCAATCTCAATTTATCAAACAATTACAATGGAGAAGAATCTGTCACAGTGGGTAATGGTCAACCTCTAAAC
ATCCAAACACACCGGTAG
Protein sequenceShow/hide protein sequence
MIQKHQKTEILPTTMAVFHPPSQTPQTNHSHRERGRRSFHNRRGTTHSFGVENFRQQHNPNFHGFQPSSHGFGPNSFGPNARHSYGPNTQAIGQNFGRGILGSGQNSGSS
IESGSFFGSGQNTLNGGRISCQICSKFGHSALDCYNRMNFSYQGQHPPAQMAAMAVNSINPEHSSDTSNNFWLSDSGCTVHMTNDLANLNLSNNYNGEESVTVGNGQPLN
IQTHR