CuGenDBv2

Gene ID	Lag0031748
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Gag/pol protein
Genome location	chr11:13537825..13543923
RNA-Seq Expression	Lag0031748
Synteny	Lag0031748
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

ADJ18449.1 gag/pol protein, partial [Bryonia dioica]

6.9e-36

75.24

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Query:  KKISKASILPNGLKHLSRSIKQGCIADSTMEIEYVVACEAAKEVVWLRNFLTDMEVVPNMHLPITLYCDNSGAIANSKEPHSHKRGKHIKRKYHLIRKIV
        K  S +    NG   + RS+KQ CIADSTME EYV ACEAAKE VWLR FLTD+EVVPNMHLPITLYCDNSGA+ANSKEP SHKRGKHI+RKYHLIR+IV
Subjt:  KKISKASILPNGLKHLSRSIKQGCIADSTMEIEYVVACEAAKEVVWLRNFLTDMEVVPNMHLPITLYCDNSGAIANSKEPHSHKRGKHIKRKYHLIRKIV

Query:  HQGEV
        H+G+V
Subjt:  HQGEV

KAA0047792.1 gag/pol protein [Cucumis melo var. makuwa]

3.4e-35

74.29

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Query:  KKISKASILPNGLKHLSRSIKQGCIADSTMEIEYVVACEAAKEVVWLRNFLTDMEVVPNMHLPITLYCDNSGAIANSKEPHSHKRGKHIKRKYHLIRKIV
        K  S +  + NG   + RSIKQGCIADSTME EYV ACEAAKE VWLRNFL D+EVVPNM  PITLYCDNSGA+ANS+EP SHKRGKHI+RKYHLIR+IV
Subjt:  KKISKASILPNGLKHLSRSIKQGCIADSTMEIEYVVACEAAKEVVWLRNFLTDMEVVPNMHLPITLYCDNSGAIANSKEPHSHKRGKHIKRKYHLIRKIV

Query:  HQGEV
        H+G+V
Subjt:  HQGEV

KAA0049626.1 gag/pol protein [Cucumis melo var. makuwa]

3.1e-36

73.64

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Query:  QQLLHKKISKASILPNGLKHLSRSIKQGCIADSTMEIEYVVACEAAKEVVWLRNFLTDMEVVPNMHLPITLYCDNSGAIANSKEPHSHKRGKHIKRKYHL
        + +L K  S +    NG   + RSIKQGCIADSTME EYVVACEAAKEVVWLR FL D+EVVPNM+LPITLYCDNSGA+ANSKEP SHKRGKHI+RKYHL
Subjt:  QQLLHKKISKASILPNGLKHLSRSIKQGCIADSTMEIEYVVACEAAKEVVWLRNFLTDMEVVPNMHLPITLYCDNSGAIANSKEPHSHKRGKHIKRKYHL

Query:  IRKIVHQGEV
        IR++V QG+V
Subjt:  IRKIVHQGEV

TYK06386.1 gag/pol protein [Cucumis melo var. makuwa]

1.2e-35

74.29

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Query:  KKISKASILPNGLKHLSRSIKQGCIADSTMEIEYVVACEAAKEVVWLRNFLTDMEVVPNMHLPITLYCDNSGAIANSKEPHSHKRGKHIKRKYHLIRKIV
        K  S +    NG   + RSIKQ CIADSTME+EYV ACEAAKE VWL+ FLTD+E VPNMHLPITLYCDNSGA+ANS+EP SHKRGKHI+RKYHLIRKIV
Subjt:  KKISKASILPNGLKHLSRSIKQGCIADSTMEIEYVVACEAAKEVVWLRNFLTDMEVVPNMHLPITLYCDNSGAIANSKEPHSHKRGKHIKRKYHLIRKIV

Query:  HQGEV
        H+G+V
Subjt:  HQGEV

TYK15985.1 retrovirus-related pol polyprotein from transposon tnt 1-94 [Cucumis melo var. makuwa]

9.0e-36

82.11

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Query:  NGLKHLSRSIKQGCIADSTMEIEYVVACEAAKEVVWLRNFLTDMEVVPNMHLPITLYCDNSGAIANSKEPHSHKRGKHIKRKYHLIRKIVHQGEV
        NG   + RSIKQGCIADSTME EYVVACEAAKEVVWLR FL D+EVVPNM+LPITLYCDNSGA+ANSKEP SHKRGKHI+RKYHLIR++V QG+V
Subjt:  NGLKHLSRSIKQGCIADSTMEIEYVVACEAAKEVVWLRNFLTDMEVVPNMHLPITLYCDNSGAIANSKEPHSHKRGKHIKRKYHLIRKIVHQGEV

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TWB9 Gag/pol protein

1.6e-35

74.29

Show/hide

Query:  KKISKASILPNGLKHLSRSIKQGCIADSTMEIEYVVACEAAKEVVWLRNFLTDMEVVPNMHLPITLYCDNSGAIANSKEPHSHKRGKHIKRKYHLIRKIV
        K  S +  + NG   + RSIKQGCIADSTME EYV ACEAAKE VWLRNFL D+EVVPNM  PITLYCDNSGA+ANS+EP SHKRGKHI+RKYHLIR+IV
Subjt:  KKISKASILPNGLKHLSRSIKQGCIADSTMEIEYVVACEAAKEVVWLRNFLTDMEVVPNMHLPITLYCDNSGAIANSKEPHSHKRGKHIKRKYHLIRKIV

Query:  HQGEV
        H+G+V
Subjt:  HQGEV

A0A5A7U616 Gag/pol protein

1.5e-36

73.64

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Query:  QQLLHKKISKASILPNGLKHLSRSIKQGCIADSTMEIEYVVACEAAKEVVWLRNFLTDMEVVPNMHLPITLYCDNSGAIANSKEPHSHKRGKHIKRKYHL
        + +L K  S +    NG   + RSIKQGCIADSTME EYVVACEAAKEVVWLR FL D+EVVPNM+LPITLYCDNSGA+ANSKEP SHKRGKHI+RKYHL
Subjt:  QQLLHKKISKASILPNGLKHLSRSIKQGCIADSTMEIEYVVACEAAKEVVWLRNFLTDMEVVPNMHLPITLYCDNSGAIANSKEPHSHKRGKHIKRKYHL

Query:  IRKIVHQGEV
        IR++V QG+V
Subjt:  IRKIVHQGEV

A0A5D3C7T2 Gag/pol protein

5.7e-36

74.29

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Query:  KKISKASILPNGLKHLSRSIKQGCIADSTMEIEYVVACEAAKEVVWLRNFLTDMEVVPNMHLPITLYCDNSGAIANSKEPHSHKRGKHIKRKYHLIRKIV
        K  S +    NG   + RSIKQ CIADSTME+EYV ACEAAKE VWL+ FLTD+E VPNMHLPITLYCDNSGA+ANS+EP SHKRGKHI+RKYHLIRKIV
Subjt:  KKISKASILPNGLKHLSRSIKQGCIADSTMEIEYVVACEAAKEVVWLRNFLTDMEVVPNMHLPITLYCDNSGAIANSKEPHSHKRGKHIKRKYHLIRKIV

Query:  HQGEV
        H+G+V
Subjt:  HQGEV

A0A5D3CWY6 Retrovirus-related pol polyprotein from transposon tnt 1-94

4.3e-36

82.11

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Query:  NGLKHLSRSIKQGCIADSTMEIEYVVACEAAKEVVWLRNFLTDMEVVPNMHLPITLYCDNSGAIANSKEPHSHKRGKHIKRKYHLIRKIVHQGEV
        NG   + RSIKQGCIADSTME EYVVACEAAKEVVWLR FL D+EVVPNM+LPITLYCDNSGA+ANSKEP SHKRGKHI+RKYHLIR++V QG+V
Subjt:  NGLKHLSRSIKQGCIADSTMEIEYVVACEAAKEVVWLRNFLTDMEVVPNMHLPITLYCDNSGAIANSKEPHSHKRGKHIKRKYHLIRKIVHQGEV

E2GK51 Gag/pol protein (Fragment)

3.3e-36

75.24

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Query:  KKISKASILPNGLKHLSRSIKQGCIADSTMEIEYVVACEAAKEVVWLRNFLTDMEVVPNMHLPITLYCDNSGAIANSKEPHSHKRGKHIKRKYHLIRKIV
        K  S +    NG   + RS+KQ CIADSTME EYV ACEAAKE VWLR FLTD+EVVPNMHLPITLYCDNSGA+ANSKEP SHKRGKHI+RKYHLIR+IV
Subjt:  KKISKASILPNGLKHLSRSIKQGCIADSTMEIEYVVACEAAKEVVWLRNFLTDMEVVPNMHLPITLYCDNSGAIANSKEPHSHKRGKHIKRKYHLIRKIV

Query:  HQGEV
        H+G+V
Subjt:  HQGEV

SwissProt top hits

e value

%identity

Alignment

P04146 Copia protein

5.7e-09

37.65

Show/hide

Query:  KQGCIADSTMEIEYVVACEAAKEVVWLRNFLTDMEVVPNMHLPITLYCDNSGAIANSKEPHSHKRGKHIKRKYHLIRKIVHQGEV
        +Q  +A S+ E EY+   EA +E +WL+  LT + +   +  PI +Y DN G I+ +  P  HKR KHI  KYH  R+ V    +
Subjt:  KQGCIADSTMEIEYVVACEAAKEVVWLRNFLTDMEVVPNMHLPITLYCDNSGAIANSKEPHSHKRGKHIKRKYHLIRKIVHQGEV

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94

1.5e-09

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Query:  QGCIADSTMEIEYVVACEAAKEVVWLRNFLTDMEVVPNMHLPITLYCDNSGAIANSKEPHSHKRGKHIKRKYHLIRKIVHQGEVK
        Q C+A ST E EY+ A E  KE++WL+ FL ++ +    ++   +YCD+  AI  SK    H R KHI  +YH IR++V    +K
Subjt:  QGCIADSTMEIEYVVACEAAKEVVWLRNFLTDMEVVPNMHLPITLYCDNSGAIANSKEPHSHKRGKHIKRKYHLIRKIVHQGEVK

Arabidopsis top hits

e value

%identity

Alignment

AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8

2.3e-05

32.1

Show/hide

Query:  RSIKQGCIADSTMEIEYVVACEAAKEVVWLRNFLTDMEVVPNMHLPITLYCDNSGAIANSKEPHSHKRGKHIKRKYHLIRK
        +S KQ  ++ S+ E EY     A  E++WL  F  ++++   +  P  L+CDN+ AI  +     H+R KHI+   H +R+
Subjt:  RSIKQGCIADSTMEIEYVVACEAAKEVVWLRNFLTDMEVVPNMHLPITLYCDNSGAIANSKEPHSHKRGKHIKRKYHLIRK

Sequences

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CDS sequence

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ATGAAGTACGACCGATCAAGCACTAGGCAACTGGCTATCCCTAGCTCAGTCACTGGTGTTCACGAATACACAATGATCGTAGTGTGTTTTGCTCCCAGTTTTGCTGCAAC
ACAGAATTTGCTCCCTCAAGTCGCCCAGCAACAGCTTCTGCACAAAAAGATTTCCAAAGCTTCCATTCTTCCAAATGGGTTAAAACATTTATCACGTAGCATCAAGCAGG
GATGCATTGCAGACTCAACCATGGAGATCGAATATGTAGTTGCTTGCGAAGCAGCGAAAGAGGTAGTATGGCTCAGGAATTTCCTGACTGACATGGAAGTCGTTCCAAAT
ATGCATCTGCCTATCACCCTATATTGTGATAATAGCGGCGCAATTGCAAATTCAAAGGAACCTCACAGCCATAAGAGAGGCAAGCACATCAAAAGGAAATATCATCTCAT
CAGGAAGATTGTGCACCAAGGAGAAGTGAAGGATCGACTTACTAATCATGGTTATATCAGACTCCCACAAGTCATTCTAAGGCTGGAGGATAGCGGGGAAGACACTAGAG
GTGGTCCACACATCGTTCGTGATCAAGGGAATCAAAAGGAGTTGCTGAATCGGTCTCCAAAAGCCGTCATCGCCCACATGCCGTCCGGCAGCCGATCTCCACCGCGTTTG
GTTGATTTTTCGATTTCGATCTTCTGTAATCCATCGGAAGCGGTCGCAACCGCCACAGAGTTGGCTGCCAATCATGATTTCTTACACCTTCATACGGTCGGATCCTTCGA
CTTCGGAATAGTAATCTTGAACTTCGGAGTAGAAATTGACCATGGCTTTCGTCTTCTTCTGGTGATTGACCTCCATCGAAATCTTCGCCTCCATGGAAGCTTTGTCATGT
TCTTACTGTTCACACTTGTCCTGTTCATCCAACAACAACAGAGAAGTGACCAATCCCTTCAAATCCTTTCCTCTGCCATTTTTGGGTATCGAATCATCGTCCTCGTCGAC
TTCATCGTGTTTGTTCCTCTTCCTGGAACTGTCGTTCGTGTCTGTTCCTCCCCTCTGTTACAGCGCCGAAAAATAAAGGGGGAGGTCCCTCCCTCCCTCCCCGTTACAGA
TCTATACGTCCCTCCGTTCCGCTTTGAGGAAGGAGAAGAAAAAGGAAGGAAGGAAGGAAAAAAAAACAAATTGCCGCTGGCAATCGGCGGCCGGCGGCAACCGGCGACGG
CATGTGGACGGCGACGGCTGCTAGAGGAAGAAGATGGAGGGAATCCACTATTGCTTGACTCTCCACCATGTGCCCTTGATCTTGAGACTGTAAGACTCCCACAAGTCGTT
CTTGGCCTGGAGAATAGTAGGGAAGACACTAGAGGTGGTCCACACACCGTTCGTGATCAAAGGAATCAAAGGGAGTTGCTGAATCGATCTCCAAAAAGGGATAAGGCTGG
GTACCTTATCCTGGTGACACTATGGATACGGCCCGCTTTGTATATTGATACAAACGTTGTGATCCAACGCGTTCATGTGGTTGACATGCGAGTGGGGTTCGCCGACTCAA
TAAGCCTACCATTTTGGGGACAAGACCGAGTGGGGAGCTGGGAACGTAGTCTTACAAGATGGAATTCACTCCTTCCTGATATGAGGGAGACGTGGTCAGTGCAGTTGCGA
AATCACGCCCTAGTCTCACGCCATCTCTCCCTCTCTATCGTTCTCTCTCAACTGCTCTCTCTCTCAGAGAATACAGAACGATTGAATCCAGAAAAATCCTTAGAATTTTT
GCTCCCACAAGCACCTAACGCAATATCCTATTCGAGAATACCGGTGAATCCTCGTGGTGGTGTTCCTGCAATTTTTCCAGCAAGATCAAGGTGTGACTGCTGCTGTTTTT
GGGAGAAAATCGAAGGATTTTGGCGAAAAGTTCAAGGATTTCTTCAAAGGTAA

mRNA sequence

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Protein sequence

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MKYDRSSTRQLAIPSSVTGVHEYTMIVVCFAPSFAATQNLLPQVAQQQLLHKKISKASILPNGLKHLSRSIKQGCIADSTMEIEYVVACEAAKEVVWLRNFLTDMEVVPN
MHLPITLYCDNSGAIANSKEPHSHKRGKHIKRKYHLIRKIVHQGEVKDRLTNHGYIRLPQVILRLEDSGEDTRGGPHIVRDQGNQKELLNRSPKAVIAHMPSGSRSPPRL
VDFSISIFCNPSEAVATATELAANHDFLHLHTVGSFDFGIVILNFGVEIDHGFRLLLVIDLHRNLRLHGSFVMFLLFTLVLFIQQQQRSDQSLQILSSAIFGYRIIVLVD
FIVFVPLPGTVVRVCSSPLLQRRKIKGEVPPSLPVTDLYVPPFRFEEGEEKGRKEGKKNKLPLAIGGRRQPATACGRRRLLEEEDGGNPLLLDSPPCALDLETVRLPQVV
LGLENSREDTRGGPHTVRDQRNQRELLNRSPKRDKAGYLILVTLWIRPALYIDTNVVIQRVHVVDMRVGFADSISLPFWGQDRVGSWERSLTRWNSLLPDMRETWSVQLR
NHALVSRHLSLSIVLSQLLSLSENTERLNPEKSLEFLLPQAPNAISYSRIPVNPRGGVPAIFPARSRCDCCCFWEKIEGFWRKVQGFLQR

Lag0031748 (gene) of Sponge gourd (AG-4) v1 genome