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Lag0031752 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031752
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr11:13652826..13656311
RNA-Seq ExpressionLag0031752
SyntenyLag0031752
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PRQ34202.1 putative ribonuclease H-like domain-containing protein [Rosa chinensis]3.3e-1032.14Show/hide
Query:  CGIGLVMRDRNGNLRATQTVGAVLCSSPLEAEAIAVLNGLRMARDLNVTRLTILSDSLNVIRSINEELQCQSSIATIIWDIKKAYKNFESVRFKYISRRF
        CG+G+V RD  G L+    V  +   SP   EA+A+L+GLR A  +   RL I  D+L++I S+  E    S    ++ ++K+  ++FE     ++ R  
Subjt:  CGIGLVMRDRNGNLRATQTVGAVLCSSPLEAEAIAVLNGLRMARDLNVTRLTILSDSLNVIRSINEELQCQSSIATIIWDIKKAYKNFESVRFKYISRRF

Query:  NYFAHNMARVGMSDTMPVLWLQNYPQWM---VSLALQSEI
        N  AH +A+  +  + P L L++ P W+   VS+   SE+
Subjt:  NYFAHNMARVGMSDTMPVLWLQNYPQWM---VSLALQSEI

XP_024036832.1 LRR receptor-like serine/threonine-protein kinase IOS1 [Citrus clementina]3.3e-1039.52Show/hide
Query:  GIGLVMRDRNGNLRATQTVGAVLCSSPLEAEAIAVLNGLRMARDLNVTRLTILSDSLNVIRSINEELQCQSSIATIIWDIKKAYKNFESVRFKYISRRFN
        G+G V+RD NG + A      +L  S   AEA AVL GL++AR  +VT L I SD L V++ +N     +S I   I  I+   KNF+ V  K+I R  N
Subjt:  GIGLVMRDRNGNLRATQTVGAVLCSSPLEAEAIAVLNGLRMARDLNVTRLTILSDSLNVIRSINEELQCQSSIATIIWDIKKAYKNFESVRFKYISRRFN

Query:  YFAHNMARVGMSDTMPVLWLQNYP
          AH +A+  +    P +WL N P
Subjt:  YFAHNMARVGMSDTMPVLWLQNYP

XP_024157591.1 uncharacterized protein LOC112165325 [Rosa chinensis]3.0e-1131.72Show/hide
Query:  GEGEHCGIGLVMRDRNGNLRATQTVGAVLCSSPLEAEAIAVLNGLRMARDLNVTRLTILSDSLNVIRSINEELQCQSSIATIIWDIKKAYKNFESVRFKY
        G+   CG+G+V RD  GNL+    V  +   +P   EA+A+L+GLR A  +  T + I  D+L+VI ++ E  +  S+   +I ++K   ++F S    +
Subjt:  GEGEHCGIGLVMRDRNGNLRATQTVGAVLCSSPLEAEAIAVLNGLRMARDLNVTRLTILSDSLNVIRSINEELQCQSSIATIIWDIKKAYKNFESVRFKY

Query:  ISRRFNYFAHNMARVGMSDTMPVLWLQNYPQWM---VSLALQSEI
        + R  N  AH +A+  +  + P L L++ P W+   VS+  Q E+
Subjt:  ISRRFNYFAHNMARVGMSDTMPVLWLQNYPQWM---VSLALQSEI

XP_024164210.1 uncharacterized protein LOC112171231 [Rosa chinensis]7.8e-1231.17Show/hide
Query:  EMGGEGEH------CGIGLVMRDRNGNLRATQTVGAVLCSSPLEAEAIAVLNGLRMARDLNVTRLTILSDSLNVIRSINEELQCQSSIATIIWDIKKAYK
        +M  +G H      CG+G+V RD  GNL+    V  +   +P   EA+A+L+GLR A  +  TR+ +  D+L+VI ++ E  +  S+   +I ++K  ++
Subjt:  EMGGEGEH------CGIGLVMRDRNGNLRATQTVGAVLCSSPLEAEAIAVLNGLRMARDLNVTRLTILSDSLNVIRSINEELQCQSSIATIIWDIKKAYK

Query:  NFESVRFKYISRRFNYFAHNMARVGMSDTMPVLWLQNYPQWM---VSLALQSEI
        +F S    ++ R  N  AH +A+  +  + P L L++ P W+   VS+  Q E+
Subjt:  NFESVRFKYISRRFNYFAHNMARVGMSDTMPVLWLQNYPQWM---VSLALQSEI

XP_024177947.1 uncharacterized protein LOC112183863 [Rosa chinensis]4.6e-1232.14Show/hide
Query:  CGIGLVMRDRNGNLRATQTVGAVLCSSPLEAEAIAVLNGLRMARDLNVTRLTILSDSLNVIRSINEELQCQSSIATIIWDIKKAYKNFESVRFKYISRRF
        CG+G+V RD  GNL+    V  +   +P   EA+A+L+GLR A  +  TR+ +  D L+VI ++ E  +  S+   +I ++K  +++F S    ++ R  
Subjt:  CGIGLVMRDRNGNLRATQTVGAVLCSSPLEAEAIAVLNGLRMARDLNVTRLTILSDSLNVIRSINEELQCQSSIATIIWDIKKAYKNFESVRFKYISRRF

Query:  NYFAHNMARVGMSDTMPVLWLQNYPQWM---VSLALQSEI
        N  AH +A+  +  + P L L++ P W+   VS+  Q E+
Subjt:  NYFAHNMARVGMSDTMPVLWLQNYPQWM---VSLALQSEI

TrEMBL top hitse value%identityAlignment
A0A2P6QJ46 Putative ribonuclease H-like domain-containing protein1.6e-1032.14Show/hide
Query:  CGIGLVMRDRNGNLRATQTVGAVLCSSPLEAEAIAVLNGLRMARDLNVTRLTILSDSLNVIRSINEELQCQSSIATIIWDIKKAYKNFESVRFKYISRRF
        CG+G+V RD  G L+    V  +   SP   EA+A+L+GLR A  +   RL I  D+L++I S+  E    S    ++ ++K+  ++FE     ++ R  
Subjt:  CGIGLVMRDRNGNLRATQTVGAVLCSSPLEAEAIAVLNGLRMARDLNVTRLTILSDSLNVIRSINEELQCQSSIATIIWDIKKAYKNFESVRFKYISRRF

Query:  NYFAHNMARVGMSDTMPVLWLQNYPQWM---VSLALQSEI
        N  AH +A+  +  + P L L++ P W+   VS+   SE+
Subjt:  NYFAHNMARVGMSDTMPVLWLQNYPQWM---VSLALQSEI

A0A4Q3DBE2 Reverse transcriptase-like protein (Fragment)6.0e-1033.99Show/hide
Query:  TKHIEIDAQFIRDQVLAKKHEMGGEGEHCGIGLVMRDRNGNLRATQTVGAVLCSSPLEAEAIAVLNGLRMARDLNVTRLTILSDSLNVIRSINEELQCQS
        T  I +DA   RD+        GG     G+G ++RD  G + A+QT+      SP  AEA AVL G+ + R +   R  I SD L V+R I+E +   +
Subjt:  TKHIEIDAQFIRDQVLAKKHEMGGEGEHCGIGLVMRDRNGNLRATQTVGAVLCSSPLEAEAIAVLNGLRMARDLNVTRLTILSDSLNVIRSINEELQCQS

Query:  SIATIIWDIKKAYKNFESVRFKYISRRFNYFAHNMARVGMSDTMPVLWLQNYP
         + TI+  I +  +  E  R  +ISR  N  AHN+AR  ++      WL   P
Subjt:  SIATIIWDIKKAYKNFESVRFKYISRRFNYFAHNMARVGMSDTMPVLWLQNYP

A0A5C7IVJ7 RNase H domain-containing protein4.6e-1031.45Show/hide
Query:  GIGLVMRDRNGNLRATQTVGAVLCSSPLEAEAIAVLNGLRMARDLNVTRLTILSDSLNVIRSINEELQCQSSIATIIWDIKKAYKNFESVRFKYISRRFN
        G+GL++RD +G++ A+   G  L   P  AEAI +L+G+ +A +  +  L + SD+ +V+  IN ++   S I  II+DI+   +        ++    N
Subjt:  GIGLVMRDRNGNLRATQTVGAVLCSSPLEAEAIAVLNGLRMARDLNVTRLTILSDSLNVIRSINEELQCQSSIATIIWDIKKAYKNFESVRFKYISRRFN

Query:  YFAHNMARVGMSDTMPVLWLQNYP
          AHN+A+  + +    LWL++YP
Subjt:  YFAHNMARVGMSDTMPVLWLQNYP

A0A6A3D1Q4 RNase H domain-containing protein3.9e-0936.61Show/hide
Query:  SPLEAEAIAVLNGLRMARDLNVTRLTILSDSLNVIRSINEELQCQSSIATIIWDIKKAYKNFESVRFKYISRRFNYFAHNMARVGMSDTMPVLWLQNYPQ
        SP  AEAIA    LR+A DL+  RL +  D+L VI  IN   + +S I  II +IK+  ++FE + F ++ R+ N   H +A VG + T P++W++  P 
Subjt:  SPLEAEAIAVLNGLRMARDLNVTRLTILSDSLNVIRSINEELQCQSSIATIIWDIKKAYKNFESVRFKYISRRFNYFAHNMARVGMSDTMPVLWLQNYPQ

Query:  WMVSLALQSEIF
         M   A++ +++
Subjt:  WMVSLALQSEIF

A0A6P6UTC9 uncharacterized protein LOC1137139822.3e-0932.31Show/hide
Query:  GIGLVMRDRNGNLRATQTVGAVLCSSPLEAEAIAVLNGLRMARDLNVTRLTILSDSLNVIRSINEELQCQSSIATIIWDIKKAYKNFESVRFKYISRRFN
        G G+V R  NG +   + +       P   EA+A+ N + MA+ +  T++ I SDS +VI  I+   + + +IATI+ D +    +FES RF +ISR  N
Subjt:  GIGLVMRDRNGNLRATQTVGAVLCSSPLEAEAIAVLNGLRMARDLNVTRLTILSDSLNVIRSINEELQCQSSIATIIWDIKKAYKNFESVRFKYISRRFN

Query:  YFAHNMARVGMSDTMPVLWLQNYPQWMVSL
          +H +A+  +     + W Q++P W++ L
Subjt:  YFAHNMARVGMSDTMPVLWLQNYPQWMVSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein2.2e-0428.68Show/hide
Query:  GLVMRDRNGNLRATQTVGAVLCSSPLEAEAIAVLNGLRMARDLNVTRLTILSDSLNVIRSINEELQCQSSIATIIWDIKKAYKNFESVRFKYISRRFNYF
        G ++R+  G   +  ++     S+PLEAE  A+L  L+       T++ +  D   +I  IN  +   SS+A  + DI      F S++F +I R+ N  
Subjt:  GLVMRDRNGNLRATQTVGAVLCSSPLEAEAIAVLNGLRMARDLNVTRLTILSDSLNVIRSINEELQCQSSIATIIWDIKKAYKNFESVRFKYISRRFNYF

Query:  AHNMARVGM--------SDTMPVLWLQNY
        AH +A+ G         S ++P+ WL  Y
Subjt:  AHNMARVGM--------SDTMPVLWLQNY

AT4G09490.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.7e-0434.15Show/hide
Query:  PLEAEAIAVLNGLRMARDLNVTRLTILSDSLNVIRSINEELQCQSSIATIIWDIKKAYKNFESVRFKYISRRFNYFAHNMAR
        PL AEAIA+   L+ A+ + +T+L++ SDS  +I +I  E    +    II+DI      F  V F ++ R  N  A  +A+
Subjt:  PLEAEAIAVLNGLRMARDLNVTRLTILSDSLNVIRSINEELQCQSSIATIIWDIKKAYKNFESVRFKYISRRFNYFAHNMAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGTTGCGGTCTCTTCTTCATGATCTTCTGGTTGCAGTTCATTTCACTCCCATTATCTGTTGCAACAGTCTTAGTATTGCTACTATTGCATACAATCTCCTCTTTCA
TGCTCGGACCAAACATATCGAGATCGATGCTCAATTCATTCGTGATCAAGTACTTGCCAAGAAACATGAAATGGGTGGAGAAGGAGAGCACTGTGGGATTGGTCTTGTTA
TGCGTGACAGGAATGGGAATCTAAGGGCCACTCAGACAGTAGGAGCGGTGTTGTGTTCTTCTCCGTTGGAAGCAGAAGCGATTGCAGTGCTGAATGGTCTTCGTATGGCT
AGGGATTTGAATGTGACTAGATTGACGATCTTATCAGATTCGCTAAACGTTATTAGATCTATTAATGAGGAACTCCAATGCCAATCCAGTATTGCAACGATCATCTGGGA
TATTAAAAAAGCCTACAAGAATTTTGAGTCAGTTCGGTTCAAATATATTAGTCGTAGGTTTAATTATTTTGCTCATAATATGGCCCGTGTTGGCATGTCGGATACGATGC
CAGTTTTGTGGTTACAAAACTATCCTCAATGGATGGTTAGTTTAGCGCTCCAGAGCGAGATATTTTTTGCTGGTATGATTGCACCGAACATGGACTGCACGGAAATTGCA
TTTAACATTTGCAGGGCGGACACACCAAACCTGACATGGATCGCACACAAGGCCCGGAGAAGCGAGGAGGAGCCGCGAGACTCGGAACGGCCGGCGGGCCCCGTGCGGAG
TTCTGATGGGATCCGGTGCATTACTGCTGGTATGATTGCACCCGACATGGAAAGCACGCAACTTGCATTTAACATTTGCGGGGCGGAAACACCAAACCTTACATGGATCG
CACACAAGGCCTGGAGAAGCGAGGAGGAGCCGCGAGACTCAGAACAGTCGGCGGGCCCTGCGCGGGTGAACAAGCATGAGCATACGATCGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGTTGCGGTCTCTTCTTCATGATCTTCTGGTTGCAGTTCATTTCACTCCCATTATCTGTTGCAACAGTCTTAGTATTGCTACTATTGCATACAATCTCCTCTTTCA
TGCTCGGACCAAACATATCGAGATCGATGCTCAATTCATTCGTGATCAAGTACTTGCCAAGAAACATGAAATGGGTGGAGAAGGAGAGCACTGTGGGATTGGTCTTGTTA
TGCGTGACAGGAATGGGAATCTAAGGGCCACTCAGACAGTAGGAGCGGTGTTGTGTTCTTCTCCGTTGGAAGCAGAAGCGATTGCAGTGCTGAATGGTCTTCGTATGGCT
AGGGATTTGAATGTGACTAGATTGACGATCTTATCAGATTCGCTAAACGTTATTAGATCTATTAATGAGGAACTCCAATGCCAATCCAGTATTGCAACGATCATCTGGGA
TATTAAAAAAGCCTACAAGAATTTTGAGTCAGTTCGGTTCAAATATATTAGTCGTAGGTTTAATTATTTTGCTCATAATATGGCCCGTGTTGGCATGTCGGATACGATGC
CAGTTTTGTGGTTACAAAACTATCCTCAATGGATGGTTAGTTTAGCGCTCCAGAGCGAGATATTTTTTGCTGGTATGATTGCACCGAACATGGACTGCACGGAAATTGCA
TTTAACATTTGCAGGGCGGACACACCAAACCTGACATGGATCGCACACAAGGCCCGGAGAAGCGAGGAGGAGCCGCGAGACTCGGAACGGCCGGCGGGCCCCGTGCGGAG
TTCTGATGGGATCCGGTGCATTACTGCTGGTATGATTGCACCCGACATGGAAAGCACGCAACTTGCATTTAACATTTGCGGGGCGGAAACACCAAACCTTACATGGATCG
CACACAAGGCCTGGAGAAGCGAGGAGGAGCCGCGAGACTCAGAACAGTCGGCGGGCCCTGCGCGGGTGAACAAGCATGAGCATACGATCGGGTGA
Protein sequenceShow/hide protein sequence
MWLRSLLHDLLVAVHFTPIICCNSLSIATIAYNLLFHARTKHIEIDAQFIRDQVLAKKHEMGGEGEHCGIGLVMRDRNGNLRATQTVGAVLCSSPLEAEAIAVLNGLRMA
RDLNVTRLTILSDSLNVIRSINEELQCQSSIATIIWDIKKAYKNFESVRFKYISRRFNYFAHNMARVGMSDTMPVLWLQNYPQWMVSLALQSEIFFAGMIAPNMDCTEIA
FNICRADTPNLTWIAHKARRSEEEPRDSERPAGPVRSSDGIRCITAGMIAPDMESTQLAFNICGAETPNLTWIAHKAWRSEEEPRDSEQSAGPARVNKHEHTIG