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Lag0031753 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031753
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr11:13676216..13676890
RNA-Seq ExpressionLag0031753
SyntenyLag0031753
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042035.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.6e-2952.41Show/hide
Query:  MYGIERLKKLGAIVFEGSTNPADVENEAEGWWKSILARRSDA--------------------------------------LVEYERKYTELSRYADVIVA
        MY IERLKKLGA VFEGST+ AD E EAEGWWKSI+ARR+DA                                      + EYERKYTELSRYA++IVA
Subjt:  MYGIERLKKLGAIVFEGSTNPADVENEAEGWWKSILARRSDA--------------------------------------LVEYERKYTELSRYADVIVA

Query:  SESD------------SIIEEKSVVEPSHGAPTASGFRGREQRRFTPRVNVSGHQDFKRRSDRAYQ
        SESD            SIIEEKS +E S G  T SG RG+EQRRFTP VNVSG QDFK    R  Q
Subjt:  SESD------------SIIEEKSVVEPSHGAPTASGFRGREQRRFTPRVNVSGHQDFKRRSDRAYQ

KAA0043429.1 uncharacterized protein E6C27_scaffold1639G00390 [Cucumis melo var. makuwa]5.7e-2955.33Show/hide
Query:  YGIERLKKLGAIVFEGSTNPADVE-----------------------------NEAEGWWKSILARRSDA--------LVEYERKYTELSRYADVIVASE
        Y IE+LKKLGA VFEG T+PAD E                             NEAEGWWKSILARRSDA        + EYE+KYTELSRY DVIVASE
Subjt:  YGIERLKKLGAIVFEGSTNPADVE-----------------------------NEAEGWWKSILARRSDA--------LVEYERKYTELSRYADVIVASE

Query:  SD---SIIEEKSVVEPSHGAPTASGFRGREQRRFTPRVNVSGHQDFKRRS
        SD   SI +EKS VE   G  TASGFRGR+Q+RFTP +N+S  QDFK +S
Subjt:  SD---SIIEEKSVVEPSHGAPTASGFRGREQRRFTPRVNVSGHQDFKRRS

KAA0053247.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.6e-2949.44Show/hide
Query:  YGIERLKKLGAIVFEGSTNPADVEN-----------------------------EAEGWWKSILARRSDA------------------------------
        YGIER+ KLGA VFEGST+PAD EN                             EAEGWWKSILARRSDA                              
Subjt:  YGIERLKKLGAIVFEGSTNPADVEN-----------------------------EAEGWWKSILARRSDA------------------------------

Query:  --------LVEYERKYTELSRYADVIVASESD---SIIEEKSVVEPSHGAPTASGFRGREQRRFTPRVNVSGHQDFKRRS
                + EYERKYTE+SRYADVIVA ESD   SI +EKSVVE S G  TASGFRGREQRRFTP +N+S  QDFK RS
Subjt:  --------LVEYERKYTELSRYADVIVASESD---SIIEEKSVVEPSHGAPTASGFRGREQRRFTPRVNVSGHQDFKRRS

TYK00849.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]5.5e-3258.94Show/hide
Query:  YGIERLKKLGAIVFEGSTNPADVEN-----------------------------EAEGWWKSILARRSDA--------LVEYERKYTELSRYADVIVASE
        YGIERLKKLGA VFEGST+PAD EN                             EAE WWKS+LARRSDA        + EYERKYTELSRYADVIVASE
Subjt:  YGIERLKKLGAIVFEGSTNPADVEN-----------------------------EAEGWWKSILARRSDA--------LVEYERKYTELSRYADVIVASE

Query:  SDS----IIEEKSVVEPSHGAPTASGFRGREQRRFTPRVNVSGHQDFKRRS
        SD     I EEKS VE S G  T+SGFRGREQRRFTP +N+S  QDFK RS
Subjt:  SDS----IIEEKSVVEPSHGAPTASGFRGREQRRFTPRVNVSGHQDFKRRS

TYK17971.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.6e-2952.41Show/hide
Query:  MYGIERLKKLGAIVFEGSTNPADVENEAEGWWKSILARRSDA--------------------------------------LVEYERKYTELSRYADVIVA
        MY IERLKKLGA VFEGST+ AD E EAEGWWKSI+ARR+DA                                      + EYERKYTELSRYA++IVA
Subjt:  MYGIERLKKLGAIVFEGSTNPADVENEAEGWWKSILARRSDA--------------------------------------LVEYERKYTELSRYADVIVA

Query:  SESD------------SIIEEKSVVEPSHGAPTASGFRGREQRRFTPRVNVSGHQDFKRRSDRAYQ
        SESD            SIIEEKS +E S G  T SG RG+EQRRFTP VNVSG QDFK    R  Q
Subjt:  SESD------------SIIEEKSVVEPSHGAPTASGFRGREQRRFTPRVNVSGHQDFKRRSDRAYQ

TrEMBL top hitse value%identityAlignment
A0A5A7TKT0 Reverse transcriptase1.2e-2952.41Show/hide
Query:  MYGIERLKKLGAIVFEGSTNPADVENEAEGWWKSILARRSDA--------------------------------------LVEYERKYTELSRYADVIVA
        MY IERLKKLGA VFEGST+ AD E EAEGWWKSI+ARR+DA                                      + EYERKYTELSRYA++IVA
Subjt:  MYGIERLKKLGAIVFEGSTNPADVENEAEGWWKSILARRSDA--------------------------------------LVEYERKYTELSRYADVIVA

Query:  SESD------------SIIEEKSVVEPSHGAPTASGFRGREQRRFTPRVNVSGHQDFKRRSDRAYQ
        SESD            SIIEEKS +E S G  T SG RG+EQRRFTP VNVSG QDFK    R  Q
Subjt:  SESD------------SIIEEKSVVEPSHGAPTASGFRGREQRRFTPRVNVSGHQDFKRRSDRAYQ

A0A5A7TQE9 Uncharacterized protein2.8e-2955.33Show/hide
Query:  YGIERLKKLGAIVFEGSTNPADVE-----------------------------NEAEGWWKSILARRSDA--------LVEYERKYTELSRYADVIVASE
        Y IE+LKKLGA VFEG T+PAD E                             NEAEGWWKSILARRSDA        + EYE+KYTELSRY DVIVASE
Subjt:  YGIERLKKLGAIVFEGSTNPADVE-----------------------------NEAEGWWKSILARRSDA--------LVEYERKYTELSRYADVIVASE

Query:  SD---SIIEEKSVVEPSHGAPTASGFRGREQRRFTPRVNVSGHQDFKRRS
        SD   SI +EKS VE   G  TASGFRGR+Q+RFTP +N+S  QDFK +S
Subjt:  SD---SIIEEKSVVEPSHGAPTASGFRGREQRRFTPRVNVSGHQDFKRRS

A0A5A7UFH6 DNA/RNA polymerases superfamily protein1.2e-2949.44Show/hide
Query:  YGIERLKKLGAIVFEGSTNPADVEN-----------------------------EAEGWWKSILARRSDA------------------------------
        YGIER+ KLGA VFEGST+PAD EN                             EAEGWWKSILARRSDA                              
Subjt:  YGIERLKKLGAIVFEGSTNPADVEN-----------------------------EAEGWWKSILARRSDA------------------------------

Query:  --------LVEYERKYTELSRYADVIVASESD---SIIEEKSVVEPSHGAPTASGFRGREQRRFTPRVNVSGHQDFKRRS
                + EYERKYTE+SRYADVIVA ESD   SI +EKSVVE S G  TASGFRGREQRRFTP +N+S  QDFK RS
Subjt:  --------LVEYERKYTELSRYADVIVASESD---SIIEEKSVVEPSHGAPTASGFRGREQRRFTPRVNVSGHQDFKRRS

A0A5D3BRY3 DNA/RNA polymerases superfamily protein2.7e-3258.94Show/hide
Query:  YGIERLKKLGAIVFEGSTNPADVEN-----------------------------EAEGWWKSILARRSDA--------LVEYERKYTELSRYADVIVASE
        YGIERLKKLGA VFEGST+PAD EN                             EAE WWKS+LARRSDA        + EYERKYTELSRYADVIVASE
Subjt:  YGIERLKKLGAIVFEGSTNPADVEN-----------------------------EAEGWWKSILARRSDA--------LVEYERKYTELSRYADVIVASE

Query:  SDS----IIEEKSVVEPSHGAPTASGFRGREQRRFTPRVNVSGHQDFKRRS
        SD     I EEKS VE S G  T+SGFRGREQRRFTP +N+S  QDFK RS
Subjt:  SDS----IIEEKSVVEPSHGAPTASGFRGREQRRFTPRVNVSGHQDFKRRS

A0A5D3D150 Reverse transcriptase1.2e-2952.41Show/hide
Query:  MYGIERLKKLGAIVFEGSTNPADVENEAEGWWKSILARRSDA--------------------------------------LVEYERKYTELSRYADVIVA
        MY IERLKKLGA VFEGST+ AD E EAEGWWKSI+ARR+DA                                      + EYERKYTELSRYA++IVA
Subjt:  MYGIERLKKLGAIVFEGSTNPADVENEAEGWWKSILARRSDA--------------------------------------LVEYERKYTELSRYADVIVA

Query:  SESD------------SIIEEKSVVEPSHGAPTASGFRGREQRRFTPRVNVSGHQDFKRRSDRAYQ
        SESD            SIIEEKS +E S G  T SG RG+EQRRFTP VNVSG QDFK    R  Q
Subjt:  SESD------------SIIEEKSVVEPSHGAPTASGFRGREQRRFTPRVNVSGHQDFKRRSDRAYQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGGGATTGAACGGCTGAAGAAGTTAGGAGCCATAGTGTTTGAGGGTTCCACAAATCCAGCTGATGTCGAGAATGAGGCGGAGGGATGGTGGAAATCCATTTTAGC
CAGGCGCAGTGATGCACTGGTCGAGTACGAGAGAAAGTATACCGAGCTTTCACGGTATGCCGATGTGATTGTGGCATCTGAGAGTGACAGTATAATAGAGGAAAAGTCGG
TAGTGGAGCCTAGTCATGGAGCTCCAACAGCTAGTGGTTTCCGAGGTCGTGAGCAGCGGAGGTTCACACCTCGAGTGAATGTTTCAGGCCATCAAGACTTCAAGCGTCGA
TCAGATAGAGCTTATCAGAGGCAGAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTATGGGATTGAACGGCTGAAGAAGTTAGGAGCCATAGTGTTTGAGGGTTCCACAAATCCAGCTGATGTCGAGAATGAGGCGGAGGGATGGTGGAAATCCATTTTAGC
CAGGCGCAGTGATGCACTGGTCGAGTACGAGAGAAAGTATACCGAGCTTTCACGGTATGCCGATGTGATTGTGGCATCTGAGAGTGACAGTATAATAGAGGAAAAGTCGG
TAGTGGAGCCTAGTCATGGAGCTCCAACAGCTAGTGGTTTCCGAGGTCGTGAGCAGCGGAGGTTCACACCTCGAGTGAATGTTTCAGGCCATCAAGACTTCAAGCGTCGA
TCAGATAGAGCTTATCAGAGGCAGAGTTAG
Protein sequenceShow/hide protein sequence
MYGIERLKKLGAIVFEGSTNPADVENEAEGWWKSILARRSDALVEYERKYTELSRYADVIVASESDSIIEEKSVVEPSHGAPTASGFRGREQRRFTPRVNVSGHQDFKRR
SDRAYQRQS