; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0031766 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0031766
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr11:14119144..14121783
RNA-Seq ExpressionLag0031766
SyntenyLag0031766
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036008.1 Retrotransposon gag protein [Cucumis melo var. makuwa]1.8e-2157.94Show/hide
Query:  MSMVVTEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKSEGLK
        +SM   EEENQC +ST+ R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M + + K F E N D K+ S +PSRMKRK SV INTEGSL  +  +
Subjt:  MSMVVTEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKSEGLK

Query:  FGVFIHP
        F +F +P
Subjt:  FGVFIHP

KAA0044978.1 retrotransposon gag protein [Cucumis melo var. makuwa]8.0e-2258.88Show/hide
Query:  MSMVVTEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKSEGLK
        +SM   EEENQC  ST+ R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D K+ S +PSRMKRK SV INTEGSL  +  +
Subjt:  MSMVVTEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKSEGLK

Query:  FGVFIHP
        F +F +P
Subjt:  FGVFIHP

KAA0050734.1 gag protease polyprotein [Cucumis melo var. makuwa]8.0e-2258.88Show/hide
Query:  MSMVVTEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKSEGLK
        +SM   EEENQC  ST+ R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D K+ S +PSRMKRK SV INTEGSL  +  +
Subjt:  MSMVVTEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKSEGLK

Query:  FGVFIHP
        F +F +P
Subjt:  FGVFIHP

KAA0050736.1 retrotransposon gag protein [Cucumis melo var. makuwa]4.0e-2157.01Show/hide
Query:  MSMVVTEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKSEGLK
        +SM   EEENQC +ST+TR SAF+RLS+S SKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D K+ S +PSR+KRK S+ INTEGSL  +  +
Subjt:  MSMVVTEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKSEGLK

Query:  FGVFIHP
        F +F +P
Subjt:  FGVFIHP

TYK16519.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.3e-2157.94Show/hide
Query:  MSMVVTEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKSEGLK
        +SM   EEENQC  ST+ R SAF+RLS+STSKK +PSTS FDRLK+T++Q KR+M + + K F E N D K+ S +PSRMKRK SV INTEGSL  +  +
Subjt:  MSMVVTEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKSEGLK

Query:  FGVFIHP
        F +F +P
Subjt:  FGVFIHP

TrEMBL top hitse value%identityAlignment
A0A5A7SZJ7 Retrotransposon gag protein8.6e-2257.94Show/hide
Query:  MSMVVTEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKSEGLK
        +SM   EEENQC +ST+ R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M + + K F E N D K+ S +PSRMKRK SV INTEGSL  +  +
Subjt:  MSMVVTEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKSEGLK

Query:  FGVFIHP
        F +F +P
Subjt:  FGVFIHP

A0A5A7TQ06 Retrotransposon gag protein3.9e-2258.88Show/hide
Query:  MSMVVTEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKSEGLK
        +SM   EEENQC  ST+ R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D K+ S +PSRMKRK SV INTEGSL  +  +
Subjt:  MSMVVTEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKSEGLK

Query:  FGVFIHP
        F +F +P
Subjt:  FGVFIHP

A0A5A7U974 Retrotransposon gag protein1.9e-2157.01Show/hide
Query:  MSMVVTEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKSEGLK
        +SM   EEENQC +ST+TR SAF+RLS+S SKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D K+ S +PSR+KRK S+ INTEGSL  +  +
Subjt:  MSMVVTEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKSEGLK

Query:  FGVFIHP
        F +F +P
Subjt:  FGVFIHP

A0A5D3BBF9 Gag protease polyprotein3.9e-2258.88Show/hide
Query:  MSMVVTEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKSEGLK
        +SM   EEENQC  ST+ R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D K+ S +PSRMKRK SV INTEGSL  +  +
Subjt:  MSMVVTEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKSEGLK

Query:  FGVFIHP
        F +F +P
Subjt:  FGVFIHP

A0A5D3D209 Retrotransposon gag protein1.1e-2157.94Show/hide
Query:  MSMVVTEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKSEGLK
        +SM   EEENQC  ST+ R SAF+RLS+STSKK +PSTS FDRLK+T++Q KR+M + + K F E N D K+ S +PSRMKRK SV INTEGSL  +  +
Subjt:  MSMVVTEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKSEGLK

Query:  FGVFIHP
        F +F +P
Subjt:  FGVFIHP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTATGGTCGTGACAGAAGAAGAAAATCAATGTTCGGTGTCCACCTTCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCAACCTTC
GACATCTGTTTTTGATCGCCTCAAAGTAACAAGCGATCAACCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTCGATGAAGTAAACAGCGACAAGAAGCTTCAAA
GTAGCATCCCGTCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATACAGAAGGTTCCTTGAAGTCCGAAGGCCTCAAGTTCGGTGTTTTCATTCACCCTAATTGCGTT
GTTCCTTCTCCAAGTCCGAAGGAGCTTTCGCTCTTGCGTTGTTCCTTCTCCAAGTCCGAAGGTTTGCACGTGTTGAAGGTCCTCATGCACTGTGCTACTGTTCCTTCCCT
CACGTGTTTCTCATGTTCTTACGCTGCAGTTCCTTCCCACAAGTCCGAAGGTTCGCTCCGCTCCTTGCTTCCTCCAAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGA
AATCACTGCAAGAGAAGTTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAATGAAGCTG
ATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCTAATGAAGCTGATGACGACCGTGGTGACCAC
CCCTGTAGGAAACTACAGTCATCAAAGTGATTGGTCTAGACAGATGGTGAAATCACTACAAATGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTC
ATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTATAGTCATCAAAGTGACTGGTCTAGA
CAGGTGGTGAAGTCACTGCAATTGAATCTGATGACGACCGTGGTGACTACCCCTGAAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCA
AATGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGGGGCATTTGTTGAAGGAGAAATTTCGGCCAATCACA
AATTGCCACGTCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTATGGTCGTGACAGAAGAAGAAAATCAATGTTCGGTGTCCACCTTCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCAACCTTC
GACATCTGTTTTTGATCGCCTCAAAGTAACAAGCGATCAACCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTCGATGAAGTAAACAGCGACAAGAAGCTTCAAA
GTAGCATCCCGTCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATACAGAAGGTTCCTTGAAGTCCGAAGGCCTCAAGTTCGGTGTTTTCATTCACCCTAATTGCGTT
GTTCCTTCTCCAAGTCCGAAGGAGCTTTCGCTCTTGCGTTGTTCCTTCTCCAAGTCCGAAGGTTTGCACGTGTTGAAGGTCCTCATGCACTGTGCTACTGTTCCTTCCCT
CACGTGTTTCTCATGTTCTTACGCTGCAGTTCCTTCCCACAAGTCCGAAGGTTCGCTCCGCTCCTTGCTTCCTCCAAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGA
AATCACTGCAAGAGAAGTTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAATGAAGCTG
ATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCTAATGAAGCTGATGACGACCGTGGTGACCAC
CCCTGTAGGAAACTACAGTCATCAAAGTGATTGGTCTAGACAGATGGTGAAATCACTACAAATGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTC
ATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTATAGTCATCAAAGTGACTGGTCTAGA
CAGGTGGTGAAGTCACTGCAATTGAATCTGATGACGACCGTGGTGACTACCCCTGAAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCA
AATGAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGGGGCATTTGTTGAAGGAGAAATTTCGGCCAATCACA
AATTGCCACGTCATTAA
Protein sequenceShow/hide protein sequence
MSMVVTEEENQCSVSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSIPSRMKRKFSVLINTEGSLKSEGLKFGVFIHPNCV
VPSPSPKELSLLRCSFSKSEGLHVLKVLMHCATVPSLTCFSCSYAAVPSHKSEGSLRSLLPPSHQSDWSRQVVKSLQEKLMTTVVTTPAGNYSHQSDWSRQVVKSLQMKL
MTTVVTTPAGNYSHQSDWSRQVVKSLLMKLMTTVVTTPVGNYSHQSDWSRQMVKSLQMKLMTTVVTTPAGNYSHQSDWSRQVVKSLQVKLMTTVVTTPAGNYSHQSDWSR
QVVKSLQLNLMTTVVTTPEGNYSHQSDWSRQVVKSLQMKLMTTVVTTPAGNYSHQSDWSRQGAFVEGEISANHKLPRH